BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0106.0030.p         (92 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc04168 Non COG                                                      100   2e-21
AGc1623 [S] COG1937 Uncharacterized protein conserved in bacteri...    97   8e-21
RSp0553 [S] COG1937 Uncharacterized protein conserved in bacteri...    84   8e-17
yaiN [S] COG1937 Uncharacterized protein conserved in bacteria E...    79   3e-15
ZyaiN [S] COG1937 Uncharacterized protein conserved in bacteria ...    79   3e-15

>SMc04168 Non COG
          Length = 80

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 2/82 (2%)

Query: 11 LVGRVRRIKGQLEAVERALESEIGCADVLMLVASVRGAINGLTAELLEDHIRHHVVDPAR 70
          ++ RVRR+KGQ+EAVERALE+   C D+L LVASVRGA+NGLT EL+EDHIR HV     
Sbjct: 1  MLARVRRLKGQMEAVERALEARQPCGDILNLVASVRGAVNGLTIELIEDHIRGHV--AGH 58

Query: 71 EKDPEKAQGAADLIDVVRTYLK 92
          E   E+ +GAA+LI++VR YLK
Sbjct: 59 ETQGEREEGAAELIEIVRRYLK 80


>AGc1623 [S] COG1937 Uncharacterized protein conserved in bacteria Atu
          Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 92

 Score = 97.1 bits (240), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 71/92 (77%), Gaps = 2/92 (2%)

Query: 1  MSHTIKHKSKLVGRVRRIKGQLEAVERALESEIGCADVLMLVASVRGAINGLTAELLEDH 60
          MSHTI++K KL+ R+RR+KGQ+EAVERAL+    C +VL L+ASVRGA++GLT E++++H
Sbjct: 3  MSHTIRNKDKLLTRIRRLKGQMEAVERALDDAKPCGEVLQLLASVRGALSGLTGEVMQEH 62

Query: 61 IRHHVVDPAREKDPEKAQGAADLIDVVRTYLK 92
          +  HVV    E + E+A+ A +L  V++TY++
Sbjct: 63 LHEHVVHA--ENEDERARAAEELAQVLKTYIR 92


>RSp0553 [S] COG1937 Uncharacterized protein conserved in bacteria Rso
          Ralstonia solanacearum
          Length = 90

 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 8/95 (8%)

Query: 1  MSHTIKHKSKLVGRVRRIKGQLEAVERALESEIGCADVLMLVASVRGAINGLTAELLEDH 60
          M HTI+ K+KL+ RVRRI+GQ  A+E+ L  E  C +VL  +A++RGA+NGL A ++E H
Sbjct: 1  MPHTIRDKAKLLARVRRIQGQAAALEKQLNEEGDCTEVLQQIAAIRGAVNGLMAAVIEGH 60

Query: 61 IRHHVVDPAREKDPEKAQGAADL---IDVVRTYLK 92
          +  HVV     K+P +AQ   DL   + V+++YLK
Sbjct: 61 LTDHVV-----KEPTEAQRQQDLDAVLQVIKSYLK 90


>yaiN [S] COG1937 Uncharacterized protein conserved in bacteria Eco
          Escherichia coli K12
          Length = 98

 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 1/92 (1%)

Query: 1  MSHTIKHKSKLVGRVRRIKGQLEAVERALESEIGCADVLMLVASVRGAINGLTAELLEDH 60
          M  T + K K++ RVRRI+GQ++A+ER+LE +  C  +L  +A+VRGA NGL AE+LE H
Sbjct: 8  MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESH 67

Query: 61 IRHHVVDPAREKDPEKAQGAADLIDVVRTYLK 92
          IR    D       E +Q   D I++VR YLK
Sbjct: 68 IR-ETFDRNDCYSREVSQSVDDTIELVRAYLK 98


>ZyaiN [S] COG1937 Uncharacterized protein conserved in bacteria EcZ
          Escherichia coli O157:H7 EDL933
          Length = 98

 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 1/92 (1%)

Query: 1  MSHTIKHKSKLVGRVRRIKGQLEAVERALESEIGCADVLMLVASVRGAINGLTAELLEDH 60
          M  T + K K++ RVRRI+GQ++A+ER+LE +  C  +L  +A+VRGA NGL AE+LE H
Sbjct: 8  MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESH 67

Query: 61 IRHHVVDPAREKDPEKAQGAADLIDVVRTYLK 92
          IR    D       E +Q   D I++VR YLK
Sbjct: 68 IR-ETFDRNDCYSREVSQSVDDTIELVRAYLK 98