BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0106.0015.p         (207 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGpA622 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase At...   126   3e-29
RSc0273 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Rs...   100   4e-21
PA0118 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Pae...    89   8e-18
CC0643 Non COG                                                         84   2e-16

>AGpA622 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 219

 Score =  126 bits (317), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 102/195 (52%), Gaps = 3/195 (1%)

Query: 3   RQIDYYFSLQSPWAYIGHKPFVRLVSTYDLKVNYRPVLLVDLFSETGGLPLAKRHPVRQR 62
           + + YY +L SPWAY+G   F  LV  +DL V  RP  +V   +E GG+PL  R   RQ 
Sbjct: 26  KTVYYYHALSSPWAYLGGPQFKALVEKHDLDVVVRPTRIV---TENGGVPLRSRPQPRQD 82

Query: 63  YRMIELQRWRDKRGLNFHLQPANWPFNGRLADGVVIAMLEAGLDPEPFLQRAYPAVWEQQ 122
           Y  +EL RWR + G+   L+P  +P N   +  +VIA    GL           A+W ++
Sbjct: 83  YHAVELDRWRKRLGMPLVLKPRYYPTNNEFSARMVIAADRQGLPALELSHALLRALWAEE 142

Query: 123 LNLADPATLVKLADDAGLPGRQLVERSGTEAISAAYEQNRQNALDADVFGSPGYVLDGEV 182
            ++ DP   + +A+  GL GR L     T  I AA+  +   A    VFG+P +V    +
Sbjct: 143 QDVTDPDVRIAVANSLGLDGRALRALEDTPEIMAAWHDSHAEAQSRGVFGTPTWVYRDTL 202

Query: 183 FWGQDRIELLEDALK 197
           +WGQDR+  L+DAL 
Sbjct: 203 YWGQDRLTFLDDALS 217


>RSc0273 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Rso Ralstonia
           solanacearum
          Length = 201

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 4/202 (1%)

Query: 1   MPRQIDYYFSLQSPWAYIGHKPFVRLVSTYDLKVNYRPVLLVDLFSETGGLPLAKRHPVR 60
           M   ID+YF   SP+ Y        L   Y+    + P+LL  +F  TGG PLA++ P++
Sbjct: 1   MNGAIDFYFDFSSPYGYFASTRVEALAQQYNRATAWHPILLGVVFKTTGGAPLAQQ-PLK 59

Query: 61  QRYRMIELQRWRDKRGLNFHLQPANWPFNGRLADGVVIAMLE--AGLDPEPFLQRAYPAV 118
             Y   + +R     G+++  +P ++P   + A   ++ + +   G     F Q  Y A+
Sbjct: 60  GDYAWRDFERTARFHGIDYR-KPTHFPLPTQYAARAMLWVHDHHGGDRAIGFAQAVYRAL 118

Query: 119 WEQQLNLADPATLVKLADDAGLPGRQLVERSGTEAISAAYEQNRQNALDADVFGSPGYVL 178
           +   +N+ +PA ++K+AD  G+ G  L   +G++ I    +     A+   VFGSP  ++
Sbjct: 119 FVDDVNIGEPAEVMKIADALGIDGNALNAGAGSQQIKDQLKAEIDLAMSRGVFGSPYVII 178

Query: 179 DGEVFWGQDRIELLEDALKSGR 200
           DGE FWG DR + +E  L+ GR
Sbjct: 179 DGEPFWGFDRFDQIEALLRDGR 200


>PA0118 [Q] COG3917 2-hydroxychromene-2-carboxylate isomerase Pae
           Pseudomonas aeruginosa
          Length = 195

 Score = 88.6 bits (218), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 13/201 (6%)

Query: 1   MPRQIDYYFSLQSPWAYIGHKPFVRLVSTYDLKVNYRPVLLVDLFSETGG-LPLAKRHPV 59
           M +QI+++F   SP  Y+      R+ + +   + +RP+LL  +F  TG   P+    P 
Sbjct: 1   MSKQIEFFFDFGSPTTYLAWTQLPRIAAAHGASIAWRPMLLGGVFKATGNHSPI--EVPA 58

Query: 60  RQRYRMIELQRWRDKRGLNFHLQPANWPFNG----RLADGVVIAMLEAGLDPEPFLQRAY 115
           + RY + +L R+  + G+     PA +P N     R A G +      G   +P+L+  +
Sbjct: 59  KGRYTLHDLARYAKRYGVPLAFNPA-FPINTLTLMRGAQGYL-----GGEGFQPYLKAVF 112

Query: 116 PAVWEQQLNLADPATLVKLADDAGLPGRQLVERSGTEAISAAYEQNRQNALDADVFGSPG 175
            A+W +Q NL  P  + ++  +AG    + +   G E +    +   + A+   VFG+P 
Sbjct: 113 EALWVRQQNLGKPEVVAQVLAEAGFDPDEFLRLVGDEQVKEGLKATTEEAVRRGVFGAPS 172

Query: 176 YVLDGEVFWGQDRIELLEDAL 196
           + +  ++F+GQDR++ + + L
Sbjct: 173 FFVGDQLFFGQDRLDFVAEVL 193


>CC0643 Non COG
          Length = 206

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 6/201 (2%)

Query: 3   RQIDYYFSLQSPWAYIGHKPFVRLVSTYDLKVNYRPVLLVDLFSETGG-LPLAKRHPVRQ 61
           + ID+ F   SP AY+  K    + +     V   P LL  +F  TG   P+     V+ 
Sbjct: 8   KSIDFIFDFGSPNAYLSWKLLPEIAARQGAAVRLIPCLLGGIFKATGNQAPMIAFGGVKG 67

Query: 62  R--YRMIELQRWRDKRGLN-FHLQPANWPFNGRLADGVVIAMLEAGLDPEPFLQRAYPAV 118
           +  Y M+E +R+    GL  F   P ++P N  L    +IA    G+  E +L+     +
Sbjct: 68  KMDYEMLETRRFIAAHGLTAFRFNP-HFPVNTLLLMRGMIAAQRIGV-AEAYLEAMLKGM 125

Query: 119 WEQQLNLADPATLVKLADDAGLPGRQLVERSGTEAISAAYEQNRQNALDADVFGSPGYVL 178
           WE  L L DP   V  A+ AGL G  L+  +G   + A    N + A+    FG P + +
Sbjct: 126 WEDGLKLDDPEVFVATANAAGLDGAALLAATGDAEVKAELVANTEAAVARGTFGIPTFFV 185

Query: 179 DGEVFWGQDRIELLEDALKSG 199
             E+F+G++R+  +E  L  G
Sbjct: 186 GEEIFFGKERLGQVEAELAKG 206