BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0104.0054.p         (101 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1047 [GEPR] COG0477 Permeases of the major facilitator superf...   116   1e-26
AGl343 [GEPR] COG0477 Permeases of the major facilitator superfa...   109   2e-24
NMA1574 [GEPR] COG0477 Permeases of the major facilitator superf...    97   8e-21
NMB1362 [GEPR] COG0477 Permeases of the major facilitator superf...    97   1e-20

>RSp1047 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 549

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 69/92 (75%)

Query: 1   MFGTQFVGAIHGRLLTAWSTAGIIGPVVVNYIREFQLAAGVPRDQLYNTTMYILCAMLIA 60
           MFGTQ VGAIHGRLLTAWSTAGI+GPV+VNY+RE+Q+A GV R  +Y+ TM +L  +L+ 
Sbjct: 408 MFGTQMVGAIHGRLLTAWSTAGILGPVLVNYLREYQIAHGVARAAVYDITMMVLAGLLVL 467

Query: 61  GLICNYLIKPVDPKWHMSXGSTPRRRCSGCSS 92
           G ICN L++PVDPK  M+      +R +  ++
Sbjct: 468 GFICNLLVRPVDPKHFMTEAQLDEQRHAATAA 499


>AGl343 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 552

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 1/79 (1%)

Query: 1   MFGTQFVGAIHGRLLTAWSTAGIIGPVVVNYIREFQLAAGV-PRDQLYNTTMYILCAMLI 59
           +FGTQFVGAIHGRLLTAW+TAGI GPVVVNYIRE Q+AAGV P   LY +TMYIL  ML 
Sbjct: 414 IFGTQFVGAIHGRLLTAWATAGIAGPVVVNYIREAQIAAGVAPGPALYTSTMYILAGMLA 473

Query: 60  AGLICNYLIKPVDPKWHMS 78
            GLI N  ++P+  KW MS
Sbjct: 474 IGLIANAFVRPLADKWFMS 492


>NMA1574 [GEPR] COG0477 Permeases of the major facilitator superfamily NmA
           Neisseria meningitidis Z2491
          Length = 513

 Score = 97.1 bits (240), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 44/76 (57%), Positives = 57/76 (75%)

Query: 1   MFGTQFVGAIHGRLLTAWSTAGIIGPVVVNYIREFQLAAGVPRDQLYNTTMYILCAMLIA 60
           +FGT  VGAIHGR+L AWSTA +IGPV+VNYIR+ Q+ +G+P  Q Y+ TMYI+  +LI 
Sbjct: 375 LFGTYQVGAIHGRILLAWSTAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMAGLLII 434

Query: 61  GLICNYLIKPVDPKWH 76
           GL+CN  +K V  K H
Sbjct: 435 GLLCNLAVKSVHEKHH 450


>NMB1362 [GEPR] COG0477 Permeases of the major facilitator superfamily Nme
           Neisseria meningitidis MC58
          Length = 513

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/76 (57%), Positives = 57/76 (75%)

Query: 1   MFGTQFVGAIHGRLLTAWSTAGIIGPVVVNYIREFQLAAGVPRDQLYNTTMYILCAMLIA 60
           +FGT  VGAIHGR+L AWSTA +IGPV+VNYIR+ Q+ +G+P  Q Y+ TMYI+  +LI 
Sbjct: 375 LFGTYQVGAIHGRILLAWSTAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMACLLII 434

Query: 61  GLICNYLIKPVDPKWH 76
           GL+CN  +K V  K H
Sbjct: 435 GLLCNLAVKSVHEKHH 450