BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0102.0011.p         (146 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC0070 [C] COG0240 Glycerol-3-phosphate dehydrogenase Ccr Caulob...   142   3e-34
BMEI0174 [C] COG0240 Glycerol-3-phosphate dehydrogenase Bme Bruc...   141   5e-34
AGc4804 [C] COG0240 Glycerol-3-phosphate dehydrogenase Atu Agrob...   130   9e-31
SA1306 [C] COG0240 Glycerol-3-phosphate dehydrogenase Sau Staphy...   127   9e-30
SMc03229 [C] COG0240 Glycerol-3-phosphate dehydrogenase Sme Sino...   125   3e-29

>CC0070 [C] COG0240 Glycerol-3-phosphate dehydrogenase Ccr Caulobacter
           vibrioides
          Length = 331

 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/149 (57%), Positives = 104/149 (69%), Gaps = 5/149 (3%)

Query: 3   GVEIGGAAKNVLAIAAGIVVGKNLGASALAALTTRGFSELARLGRACGARTETLSGLSGL 62
           G E GGA KNVLAIA GIV GK LG +A A + TRGF+EL RL  A GAR ET++GL GL
Sbjct: 182 GAEAGGAVKNVLAIACGIVEGKGLGRNAHATVITRGFAELTRLAVALGARPETVAGLCGL 241

Query: 63  GDLLLSCSTAQSRNFALGLALGRG---EAAPVGK--LAEGAFTAPVLCELAAAQKVDMPV 117
           GDL+L+CS+ QSRN ++GLALG+G   E A  GK  +AEG  +AP +  LA    V+ P+
Sbjct: 242 GDLVLTCSSPQSRNMSVGLALGQGLTLEQALAGKVSVAEGVASAPAVRALARKVGVEAPI 301

Query: 118 SNAVAAILGDRLTVDAAIEGLLTRPFKAE 146
             AVAAIL   + VDAAI GLL+RP K E
Sbjct: 302 CEAVAAILAGEVAVDAAIAGLLSRPLKPE 330


>BMEI0174 [C] COG0240 Glycerol-3-phosphate dehydrogenase Bme Brucella
           melitensis
          Length = 326

 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/146 (56%), Positives = 105/146 (71%)

Query: 1   VRGVEIGGAAKNVLAIAAGIVVGKNLGASALAALTTRGFSELARLGRACGARTETLSGLS 60
           ++GVE GGA KNVLAIAAG  +G+  GASA AAL TRGF+EL R+G+A  AR ET+ GLS
Sbjct: 180 LKGVETGGALKNVLAIAAGAAIGRGYGASAQAALVTRGFAELRRIGQAMSARPETIMGLS 239

Query: 61  GLGDLLLSCSTAQSRNFALGLALGRGEAAPVGKLAEGAFTAPVLCELAAAQKVDMPVSNA 120
           GLGDL+L+CS++QSRN++ GLALGRGE      LAEG  TAP+  EL     +  P+ +A
Sbjct: 240 GLGDLMLTCSSSQSRNYSYGLALGRGEDLTSRPLAEGVATAPIAAELCRKHNISAPIIDA 299

Query: 121 VAAILGDRLTVDAAIEGLLTRPFKAE 146
           V A+L  ++T+D A+  LL RP K E
Sbjct: 300 VGALLDGKITIDEAVTALLNRPLKTE 325


>AGc4804 [C] COG0240 Glycerol-3-phosphate dehydrogenase Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 327

 Score =  130 bits (327), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 78/145 (53%), Positives = 100/145 (68%), Gaps = 1/145 (0%)

Query: 3   GVEIGGAAKNVLAIAAGIVVGKNLGASALAALTTRGFSELARLGRACGARTETLSGLSGL 62
           GV++GGA KNVLAIAAGIV G  LG SA AAL +RG +E++RL  A G + +T+ GLSGL
Sbjct: 183 GVQLGGALKNVLAIAAGIVEGAGLGDSARAALISRGLAEMSRLIVAMGGKADTVRGLSGL 242

Query: 63  GDLLLSCSTAQSRNFALGLALGRGEAAPV-GKLAEGAFTAPVLCELAAAQKVDMPVSNAV 121
           GDL+L+ ++ QSRN   G+ALGRGE   + G L EGAF A V   L     +DMPV+ AV
Sbjct: 243 GDLVLTATSHQSRNLRFGIALGRGEGKDMSGGLVEGAFAAAVAARLGEHHAIDMPVTEAV 302

Query: 122 AAILGDRLTVDAAIEGLLTRPFKAE 146
           AAI+   L V +A++ L+TRP   E
Sbjct: 303 AAIIDGNLDVASAMQQLMTRPITTE 327


>SA1306 [C] COG0240 Glycerol-3-phosphate dehydrogenase Sau Staphylococcus
           aureus N315
          Length = 332

 Score =  127 bits (319), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 96/149 (64%), Gaps = 5/149 (3%)

Query: 3   GVEIGGAAKNVLAIAAGIVVGKNLGASALAALTTRGFSELARLGRACGARTETLSGLSGL 62
           GVE+GGA KN++A+A+GIV G   G +A AAL TRG +E++RLG   GA   T  GL G+
Sbjct: 184 GVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGI 243

Query: 63  GDLLLSCSTAQSRNFALGLALGRGEA-----APVGKLAEGAFTAPVLCELAAAQKVDMPV 117
           GDL+++C +  SRNF LG  LG+GE+     + +  + EG +T   +  LA  + VDMP+
Sbjct: 244 GDLIVTCISTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPI 303

Query: 118 SNAVAAILGDRLTVDAAIEGLLTRPFKAE 146
           +NA+  +L + ++V   ++ L+ R  K+E
Sbjct: 304 TNALYRVLFENISVKECVKDLMERDKKSE 332


>SMc03229 [C] COG0240 Glycerol-3-phosphate dehydrogenase Sme Sinorhizobium
           meliloti
          Length = 333

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 99/146 (67%), Gaps = 2/146 (1%)

Query: 3   GVEIGGAAKNVLAIAAGIVVGKNLGASALAALTTRGFSELARLGRACGARTETLSGLSGL 62
           GV++GGA KNVLAIA GIV G  LG SA AAL +RG +E++R   A G   +T+ GLSGL
Sbjct: 188 GVQLGGALKNVLAIACGIVEGAGLGDSARAALISRGLAEMSRFIVARGGEADTVRGLSGL 247

Query: 63  GDLLLSCSTAQSRNFALGLALGRGEAAPVG--KLAEGAFTAPVLCELAAAQKVDMPVSNA 120
           GDL+L+ ++ QSRN   G+ALG+   A  G  +L EGAF A V   +A A  ++MPV+ A
Sbjct: 248 GDLVLTATSHQSRNLRFGIALGKDGRAAAGSSELVEGAFAASVAARVAGALGIEMPVTEA 307

Query: 121 VAAILGDRLTVDAAIEGLLTRPFKAE 146
           VAAI+  +L V +A+E L++RP   E
Sbjct: 308 VAAIVDGKLDVRSALEQLMSRPITHE 333