BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0101.0020.p (331 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll3135 [T] COG0664 cAMP-binding proteins - catabolite gene acti... 151 2e-36 SMb21079 [T] COG0664 cAMP-binding proteins - catabolite gene act... 90 9e-18 BMEII0854 [T] COG0664 cAMP-binding proteins - catabolite gene ac... 86 1e-16 BMEI1752 [T] COG0664 cAMP-binding proteins - catabolite gene act... 83 8e-16 mll3694 [T] COG0664 cAMP-binding proteins - catabolite gene acti... 80 5e-15 >mll3135 [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Mlo Mesorhizobium loti Length = 273 Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 121/224 (54%), Gaps = 1/224 (0%) Query: 16 LSEQDKVRLQQMPHIIKTFRDGDRVARQGDVPVHCAVVMTGMLSRRRVVSERN-QISSIY 74 LS+ +K L + F G + G P + +++ G+ +R +V+ Q +S+ Sbjct: 49 LSDAEKALLAGAMTFERHFATGQDIVASGSRPTYSTLILDGLAARYKVLENGGRQFTSLQ 108 Query: 75 VPGDVPDLHTLHLPVLDHDLCSEGTSTVAFISHSHLRRMLKESPGLTNAFWRETLIHAAI 134 V GD DLH L +DH + + V F HS LR + +++P LT W +TL+ AI Sbjct: 109 VSGDFVDLHAFLLKTMDHGIVALSPCHVMFADHSRLRTITEQAPHLTRLLWLDTLVDGAI 168 Query: 135 YREWVENLGSRAALPRVAHLFCELATRFEMVGLLDNDTFRLPLTQQDLADACGLSTVHVN 194 +REW+ +G R+ +AHL CEL R ++V + +F LPL+Q +LAD GLS VH+N Sbjct: 169 HREWIVAMGRRSKTSHLAHLVCELFVRLQVVQRTNGMSFHLPLSQAELADVLGLSVVHMN 228 Query: 195 RTVQELRKMGLLDWRGQIAYVLRREELETVAEFSADYLHALKVP 238 R + LRK+G++ W +L L+ +AEF YL ++ P Sbjct: 229 RVIGALRKVGVVSWANHTVTILDWHRLQEIAEFDPTYLSMMREP 272 >SMb21079 [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Sme Sinorhizobium meliloti Length = 243 Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 105/237 (44%), Gaps = 36/237 (15%) Query: 14 VELSEQDKVRLQQMPHIIKTFRDGDRVARQGDVPVHCAVVMTG--MLSRRRVVSERNQIS 71 + L + DK + I++ + + RQG+ VV +G + V ER QI Sbjct: 19 LALDDSDKSHFGSLGFILRRYPAHAVITRQGEEEDRIFVVHSGWGCICTNLVNGER-QIL 77 Query: 72 SIYVPGDVPDLHTLHLPVLDHDLCSEGTSTVAFISHSHLRRMLKESP------------- 118 + G+V EG +F + + L ML E+P Sbjct: 78 DFPLKGEVVASRAF-----------EGEGLESFTAQTEL--MLFEAPAKAISSGLAHSTS 124 Query: 119 ---GLTNAFWRETLIHAAIYREWVENLGSRAALPRVAHLFCELATRFEMVGLLDNDTFRL 175 GL A RE AI + + NLG R+AL R AH EL TR E F Sbjct: 125 LAAGLLGAVAREK----AILSQHLTNLGRRSALVRTAHFLLELGTRLEKADAAKTHEFEC 180 Query: 176 PLTQQDLADACGLSTVHVNRTVQELRKMGLLDWRGQIAYVLRREELETVAEFSADYL 232 PLTQ DLA A G++ +HVNR ++ELR+ G LD+R ++L ++ LE A+F YL Sbjct: 181 PLTQYDLAAALGVTAIHVNRMLRELRQRGYLDFRQGSVHLLNKKGLEHFADFDPGYL 237 >BMEII0854 [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Bme Brucella melitensis Length = 215 Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 93/196 (47%), Gaps = 2/196 (1%) Query: 40 VARQGDVPVHCAVVMTGMLSRRRVVSERN-QISSIYVPGDVPDLHTLHLPVLDHDLCSEG 98 V+RQGD ++ +G R + E + QI + GD L + L + Sbjct: 10 VSRQGDWTNSILIINSGWSCIYRDLPEGDRQILDFPMKGDFLGFRA-GLGFNYYTLFAIT 68 Query: 99 TSTVAFISHSHLRRMLKESPGLTNAFWRETLIHAAIYREWVENLGSRAALPRVAHLFCEL 158 +V IS L +++SP L F T I E + NLG R +L R+AHL EL Sbjct: 69 DLSVVEISLDILAEKMRKSPPLAVTFMELTARQRTILLEHLINLGRRTSLARIAHLMLEL 128 Query: 159 ATRFEMVGLLDNDTFRLPLTQQDLADACGLSTVHVNRTVQELRKMGLLDWRGQIAYVLRR 218 R + G D F PLTQ +LADA GL+ +H+NR ++ELR+ LL ++ L R Sbjct: 129 GFRTKANGTGDAHGFYCPLTQGELADALGLTPIHINRMLRELREDNLLVFKNNEVRFLNR 188 Query: 219 EELETVAEFSADYLHA 234 L V F +YL A Sbjct: 189 PALMQVCSFDENYLSA 204 >BMEI1752 [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Bme Brucella melitensis Length = 235 Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 40/96 (41%), Positives = 62/96 (64%) Query: 137 EWVENLGSRAALPRVAHLFCELATRFEMVGLLDNDTFRLPLTQQDLADACGLSTVHVNRT 196 E + N+G R A R AHL EL+ R + G+ + D+F PLTQ LADA GL+ +H+NR Sbjct: 131 EHLTNVGCRNAFVRTAHLLLELSDRVKSCGMGEPDSFYCPLTQYQLADALGLTPIHLNRM 190 Query: 197 VQELRKMGLLDWRGQIAYVLRREELETVAEFSADYL 232 ++ELR+ GL+ +R +L RE+L +AE+ +++ Sbjct: 191 LRELREEGLVLFRSNRVEILNREQLAALAEYDGEFM 226 >mll3694 [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Mlo Mesorhizobium loti Length = 253 Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 14/212 (6%) Query: 25 QQMPHIIKTFRDGD-------RVARQGDVPVHCAVVMTGMLSRRRVVSE-RNQISSIYVP 76 +Q I TF+ G+ V +G H V++G R +++ + R QI + +P Sbjct: 32 KQELAFISTFKKGELAVDKGATVLVEGSHSAHLYTVLSGWAFRYKLLPDGRRQILNYLMP 91 Query: 77 GDVPDLHTLHLPVLDHDLCSEGTSTVAFISHSHLRRMLKESPGLTNAFWRETLIHAAIYR 136 GD+ L + + H + + + +L + + PGL + T I + R Sbjct: 92 GDLIGLQGSVMGEMQHSVEALSPMLLCVFERDNLHELYRNHPGLA---YDITWIASREER 148 Query: 137 EWVENL---GSRAALPRVAHLFCELATRFEMVGLLDNDTFRLPLTQQDLADACGLSTVHV 193 ENL G R+A+ R A+L + +R ++VGL + ++P+TQQ +AD GLS VH Sbjct: 149 MLDENLLSVGRRSAIERAAYLIAFIGSRAKVVGLNGKQSIQIPVTQQHIADTLGLSLVHT 208 Query: 194 NRTVQELRKMGLLDWRGQIAYVLRREELETVA 225 N+T+++L L+ WR V+ E L+ +A Sbjct: 209 NKTIRKLMDRKLILWRDGGCEVVDAERLKQLA 240