BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0100.0013.p (265 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb21633 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme... 322 4e-88 paaG [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Eco Esc... 297 1e-80 RSc2873 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Rso ... 256 3e-68 CC1851 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Ccr C... 193 4e-49 DR2510 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Dra D... 177 2e-44 >SMb21633 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme Sinorhizobium meliloti Length = 263 Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 164/260 (63%), Positives = 196/260 (75%) Query: 3 SDLVLTDIRAGYRVLTLNRPDRLNSFSADLHAALMAALIAAEQDKSCRALILTGAGRGFC 62 SD VL+ + AG LTLNRPD+LN+F+ ++H AL A A D RA++LTGAGRGF Sbjct: 4 SDTVLSALEAGVLRLTLNRPDKLNAFNEEMHLALRAGFERARSDDDVRAVMLTGAGRGFS 63 Query: 63 AGQDLSDGVFTPGETPDLSAPIEKFYNPLVRKLRGIPMPVVCAVNGVAAGAGANLALACD 122 AGQDL D G PDL IE FYNPL+R +R + PVVCAVNGVAAGAGAN+A ACD Sbjct: 64 AGQDLGDRDPRKGGAPDLGRTIETFYNPLLRLIRSLEKPVVCAVNGVAAGAGANIAFACD 123 Query: 123 IVIAARSAKFIQAFAKLGLVPDTGGTWLLPRLVGGARARALAMLAEPISAERAETWGMIW 182 I +AARSA+FIQAFAK+GLVPD+GGTW LPRLVG ARA+ALAM AEP+ AE A +WG+IW Sbjct: 124 ITLAARSARFIQAFAKIGLVPDSGGTWSLPRLVGEARAKALAMTAEPLDAETAASWGLIW 183 Query: 183 KVVEDSDLMAEGHALAASLATQPTDGLALIKQALDASETNTLDAQLDLERELQGRAGRSA 242 + V+D+ LM E ALA LA PT GL L K+A+ A+ T++ D QLDLER+LQ AGRSA Sbjct: 184 RAVDDAALMDEASALAVRLAAGPTRGLGLTKRAIQAAATHSFDEQLDLERDLQREAGRSA 243 Query: 243 DYAEGVTAFLERRAPRFVGR 262 DYAEGVTAFL++R P F GR Sbjct: 244 DYAEGVTAFLDKRNPEFRGR 263 >paaG [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Eco Escherichia coli K12 Length = 262 Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 160/260 (61%), Positives = 196/260 (75%), Gaps = 1/260 (0%) Query: 4 DLVLTDIRAGYRVLTLNRPDRLNSFSADLHAALMAALIAAEQDKSCRALILTGAGRGFCA 63 + +L+ + G LTLNRP+RLNSF+ ++HA L L E+D + R L+LTGAGRGFCA Sbjct: 3 EFILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCA 62 Query: 64 GQDLSDGVFTP-GETPDLSAPIEKFYNPLVRKLRGIPMPVVCAVNGVAAGAGANLALACD 122 GQDL+D P G PDL +E+FYNPLVR+L +P PV+CAVNGVAAGAGA LAL D Sbjct: 63 GQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGD 122 Query: 123 IVIAARSAKFIQAFAKLGLVPDTGGTWLLPRLVGGARARALAMLAEPISAERAETWGMIW 182 IVIAARSAKF+ AF+KLGL+PD GGTWLLPR+ G ARA LA+L +SAE+A WGMIW Sbjct: 123 IVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIW 182 Query: 183 KVVEDSDLMAEGHALAASLATQPTDGLALIKQALDASETNTLDAQLDLERELQGRAGRSA 242 +VV+D L LA LATQPT GL LIKQA++++ETNTLD QLDLER+ Q AGRSA Sbjct: 183 QVVDDETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAGRSA 242 Query: 243 DYAEGVTAFLERRAPRFVGR 262 DY EGV+AFL +R+P+F G+ Sbjct: 243 DYREGVSAFLAKRSPQFTGK 262 >RSc2873 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Rso Ralstonia solanacearum Length = 262 Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 150/262 (57%), Positives = 187/262 (71%), Gaps = 2/262 (0%) Query: 1 MVSDLVLTDIRAGYRVLTLNRPDRLNSFSADLHAALMAALIAAEQDKSCRALILTGAGRG 60 M S +L D +TLNRPD+LNSF+A +H L AL E+ ++ RALILTGAGRG Sbjct: 1 MTSPTILLDWHDRVATITLNRPDQLNSFTAGMHRELREALDKVERQRA-RALILTGAGRG 59 Query: 61 FCAGQDLSDGVFTPGETPDLSAPIEKFYNPLVRKLRGIPMPVVCAVNGVAAGAGANLALA 120 FCAGQDLS+ TPG+ DL I++ +NPLVR+LR +P+PV+ AVNGVAAGAGANLALA Sbjct: 60 FCAGQDLSELNVTPGQMTDLGTLIDQQFNPLVRRLRALPLPVIAAVNGVAAGAGANLALA 119 Query: 121 CDIVIAARSAKFIQAFAKLGLVPDTGGTWLLPRLVGGARARALAMLAEPISAERAETWGM 180 CDIV+AA +A F+QAF K+GL+PD+GGTW +P+ +G ARA LAML E + A A WG+ Sbjct: 120 CDIVLAAENACFLQAFVKIGLLPDSGGTWFMPQRIGVARAMGLAMLGEKLDARTALAWGL 179 Query: 181 IWKVVEDSD-LMAEGHALAASLATQPTDGLALIKQALDASETNTLDAQLDLERELQGRAG 239 IW V D+ LM E A+A L+ QPT LA IK+A+ A+ T +LDAQLDLER+LQ G Sbjct: 180 IWGVYHDAKILMTEVQAMADHLSKQPTRALAAIKRAMHAAPTQSLDAQLDLERDLQRELG 239 Query: 240 RSADYAEGVTAFLERRAPRFVG 261 S DYAEGV AFL +R F G Sbjct: 240 HSRDYAEGVDAFLHKRVAHFTG 261 >CC1851 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Ccr Caulobacter vibrioides Length = 267 Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 113/256 (44%), Positives = 155/256 (60%), Gaps = 7/256 (2%) Query: 13 GYRVLTLNRPDRLNSFSADLHAALMAALIAAEQDK-SCRALILTGAGRGFCAGQDLSDGV 71 G +TL P LN+ S ++ L A + K RA+ILTG GRGFC+G +LS G Sbjct: 13 GVATVTLADPTTLNAASPEVARELHHAFSSIAAGKIEARAVILTGEGRGFCSGANLSGGG 72 Query: 72 FTPGE-----TPDLSAPIEKFYNPLVRKLRGIPMPVVCAVNGVAAGAGANLALACDIVIA 126 E PD + +E YNPL+ LR P+P+V AVNG AAG G ++AL D+++A Sbjct: 73 AAGREADVDGKPDAGSALETVYNPLMTLLRDFPLPIVTAVNGPAAGVGCSIALMGDLIVA 132 Query: 127 ARSAKFIQAFAKLGLVPDTGGTWLLPRLVGGARARALAMLAEPISAERAETWGMIWKVVE 186 A SA F+QAF ++GLVPD G T+LLPRL+G ARA + +L + I A A WG++ + V Sbjct: 133 AESAYFLQAFRRIGLVPDGGSTYLLPRLIGKARAMEMMLLGDKIPAATALQWGLVNRCVP 192 Query: 187 DSDLMAEGHALAASLATQPTDGLALIKQALDASETNTLDAQLDLERELQGRAGRSADYAE 246 D++LM HALA LA P L +I++ + S + QL ER+ Q AG++ D+ E Sbjct: 193 DAELMVTAHALALELAKGPA-ALGVIRKLVWDSLDSDWTGQLHAERKAQKIAGKTEDFIE 251 Query: 247 GVTAFLERRAPRFVGR 262 GVTAFL++RA F GR Sbjct: 252 GVTAFLQKRAAVFKGR 267 >DR2510 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Dra Deinococcus radiodurans Length = 260 Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 119/260 (45%), Positives = 156/260 (60%), Gaps = 3/260 (1%) Query: 1 MVSDLVLTDIRAGYRVLTLNRPDRLNSFSADLHAALMAALIAAEQDKSCRALILTGAGRG 60 M ++L +A R LTLNR +LN+ + L L L A+ D + R +++TGAGRG Sbjct: 1 MEQSVILVSDQAAVRTLTLNREHKLNAANDKLLLTLTRELERADADPAVRVVVITGAGRG 60 Query: 61 FCAGQDLSDGVFTPGETPDLSAPIEKFYNPLVRKLRGIPMPVVCAVNGVAAGAGANLALA 120 FCAGQDL D G + + YNPL+R +RG+ PV+ AVNGVAAGAGA+LALA Sbjct: 61 FCAGQDLGD---VSGRDMTFTEHLNHTYNPLIRTIRGLSKPVITAVNGVAAGAGASLALA 117 Query: 121 CDIVIAARSAKFIQAFAKLGLVPDTGGTWLLPRLVGGARARALAMLAEPISAERAETWGM 180 DI + R A I+ F+ + LVPD+G TW LPRLVG RA + LAE I ++ A G+ Sbjct: 118 GDIRLWTRGANLIEVFSNIALVPDSGSTWFLPRLVGYHRAFEMMALAEKIGSDDALRLGL 177 Query: 181 IWKVVEDSDLMAEGHALAASLATQPTDGLALIKQALDASETNTLDAQLDLERELQGRAGR 240 +V D A+ A A LA +P + L L KQAL + T+TLD LD E ELQ AG Sbjct: 178 CEQVFPDESFRADVQAYAERLAARPANALKLTKQALTDALTSTLDQALDREAELQQLAGD 237 Query: 241 SADYAEGVTAFLERRAPRFV 260 ++ EGVTAF E+R +FV Sbjct: 238 HWEHEEGVTAFKEKRPAQFV 257