BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0100.0010.p (372 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc01946 [E] COG0683 ABC-type branched-chain amino acid transpor... 392 e-109 BMEI0263 [E] COG0683 ABC-type branched-chain amino acid transpor... 372 e-103 mll3970 Non COG 361 2e-99 AGc4394 [E] COG0683 ABC-type branched-chain amino acid transport... 357 3e-98 PA4913 [E] COG0683 ABC-type branched-chain amino acid transport ... 342 7e-94 >SMc01946 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Sme Sinorhizobium meliloti Length = 372 Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/360 (53%), Positives = 254/360 (70%), Gaps = 4/360 (1%) Query: 10 LALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAAGGVLGKKLK 69 +AL A +A SG A A DI V V GP+TG A+FG Q + GA+ A DINAAGG+ G+++K Sbjct: 9 VALTAMVAFSGTAWA-DILVGVGGPLTGPNAAFGAQLQKGAEQAAEDINAAGGINGEQIK 67 Query: 70 LEVGDDACDPKQAVSVAEKMAGARIPFVVGHFCSSTSIPASDAYAEGNVLQITPGSTNPQ 129 + +GDD DPKQ VSVA+K + FVVGHF S SIPAS+ YAE +LQ+TP STNPQ Sbjct: 68 VVLGDDVSDPKQGVSVAQKFVADGVKFVVGHFNSGVSIPASEIYAENGILQVTPASTNPQ 127 Query: 130 FTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLADETKKAINAA 189 FTERGLWNTFR CGRDDQQG VA AYI N+ VA+IHDKT YG+GLADETKK++N A Sbjct: 128 FTERGLWNTFRTCGRDDQQGAVAGAYIAANFKDAKVAVIHDKTPYGQGLADETKKSMNEA 187 Query: 190 GVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQGVNAVLMGG 249 GV E LYE GDKDF+AL+++ K+ + VY GG + EA LI+RQM++QG+ A +M G Sbjct: 188 GVTEALYEGINTGDKDFSALIAKMKQAGVSIVYYGGLHTEAGLIMRQMKDQGLKATMMSG 247 Query: 250 DALVDKQFAAIAGPLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYTLYSYAAFQI 309 D +V + A+IAG +G+L TF+PDPRK A ++KF+ G +P+ YTLY+YAA Q+ Sbjct: 248 DGIVSNELASIAGDAVDGTLMTFAPDPRKSPAAKDLVEKFRAAGFEPEAYTLYAYAALQV 307 Query: 310 WSQAAARAQTTDAKKVAAAIKA-GSWDTVLGKISYTPKGDITLIDYVVY--RRDKDGNYA 366 ++ A A TD + VA AIKA G + T +G++ + KGDIT DYV+Y ++ DG ++ Sbjct: 308 IAEGAKAAGNTDPQAVAEAIKAKGPFKTAIGELGFDEKGDITRPDYVMYTWKKGDDGKFS 367 >BMEI0263 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Bme Brucella melitensis Length = 376 Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/359 (50%), Positives = 247/359 (68%), Gaps = 4/359 (1%) Query: 10 LALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAAGGVLGKKLK 69 +AL A +A G+A A D+ V + P+TG A +G Q + GA+ AI ++N AGG+ G+K+ Sbjct: 14 VALAAVIAFGGSAWA-DVLVGIGIPVTGPNAVYGAQIQKGAEAAIKEVNDAGGINGEKIA 72 Query: 70 LEVGDDACDPKQAVSVAEKMAGARIPFVVGHFCSSTSIPASDAYAEGNVLQITPGSTNPQ 129 + +GDD DPKQ +SVA K A + FV+GHF S +IPAS YAE +L+I+PG+TNPQ Sbjct: 73 ITIGDDVSDPKQGISVANKFAADGVKFVIGHFNSGVTIPASQVYAENGILEISPGATNPQ 132 Query: 130 FTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLADETKKAINAA 189 +TE+GLWNTFR CGRDDQQGTVA YI ++ +A++HDKT YG+GLADETKK +N Sbjct: 133 YTEQGLWNTFRTCGRDDQQGTVAGQYIFDHFKDAKIAVVHDKTPYGQGLADETKKKLNEL 192 Query: 190 GVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQGVNAVLMGG 249 G KE LYE G+KDF+AL+++ K+ ++ VY GG + EA LI+RQM +QG+ A + G Sbjct: 193 GTKETLYEGVNVGEKDFSALIAKLKQAGVNVVYWGGLHPEAGLIIRQMADQGLKAQFISG 252 Query: 250 DALVDKQFAAIAGPLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYTLYSYAAFQI 309 D +V + A+IAGP EG+L TF PDPR A +KKF+D G +P+ YTLYSYAA Q Sbjct: 253 DGIVSNELASIAGPAVEGTLNTFGPDPRNNPDNAELVKKFRDAGFEPEAYTLYSYAAVQS 312 Query: 310 WSQAAARAQTTDAKKVAAAIKA-GSWDTVLGKISYTPKGDITLIDYVVYRRDK--DGNY 365 +QAA A + D ++VA A+K G + TVLG +SY KGD L YV+Y+ +K DG Y Sbjct: 313 LAQAAKAAGSNDPQEVAKAMKEKGPFKTVLGDLSYDEKGDPKLPGYVMYKWEKGADGKY 371 >mll3970 Non COG Length = 371 Score = 361 bits (926), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 186/363 (51%), Positives = 255/363 (70%), Gaps = 4/363 (1%) Query: 10 LALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAAGGVLGKKLK 69 +AL A +A G A A D+ V GP+TG A+FG Q + GA+ A+A+INA GG+ G+++K Sbjct: 9 VALTALVAFGGNAWA-DVIFGVAGPITGPNAAFGAQLQKGAEAAVAEINAKGGINGEQIK 67 Query: 70 LEVGDDACDPKQAVSVAEKMAGARIPFVVGHFCSSTSIPASDAYAEGNVLQITPGSTNPQ 129 LEVGDD DPKQ +SVA K G + FV+GHF S SIPAS+ YAE N+++ITP +TNP+ Sbjct: 68 LEVGDDVSDPKQGISVANKFVGDGVKFVIGHFNSGVSIPASEVYAENNIVEITPAATNPK 127 Query: 130 FTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLADETKKAINAA 189 FTERGLWN FR CGRDDQQG++A AYI N+ VA++HDKT YG+GLADETKKA+NAA Sbjct: 128 FTERGLWNVFRTCGRDDQQGSIAGAYIAANFKDAKVAVVHDKTPYGQGLADETKKAMNAA 187 Query: 190 GVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQGVNAVLMGG 249 GVKE +YE GDKDF+AL+++ K+ + +Y GG + EA LI+RQ +QG+ A +M G Sbjct: 188 GVKEVMYEGVNVGDKDFSALIAKMKEAGVTLIYWGGLHTEAGLIIRQSADQGLKAPMMSG 247 Query: 250 DALVDKQFAAIAGPLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYTLYSYAAFQI 309 D +V + AAIAG G+L TF PDPR ++KF+ +G +P+ YTLY+YAA Q+ Sbjct: 248 DGIVTDELAAIAGDAVAGTLNTFGPDPRLIPANKELVEKFRAQGFEPEAYTLYAYAAVQV 307 Query: 310 WSQAAARAQTTDAKKVAAAI-KAGSWDTVLGKISYTPKGDITLIDYVVY--RRDKDGNYA 366 ++AAA A+T D + VA A+ ++G + +VLG ++Y KGD L Y++Y ++ DG Y+ Sbjct: 308 VAEAAAAAKTNDPQAVAKAMHESGPFPSVLGDLAYDAKGDPKLPGYIMYEWKKKDDGKYS 367 Query: 367 ELP 369 P Sbjct: 368 WFP 370 >AGc4394 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 391 Score = 357 bits (915), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 186/364 (51%), Positives = 246/364 (67%), Gaps = 3/364 (0%) Query: 10 LALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAAGGVLGKKLK 69 +AL A +A G+A A D+ +AV P+TG A+FG Q + GA+ A DINAAGG+ G+++K Sbjct: 28 VALTAMVAFGGSAWA-DVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGGINGEQIK 86 Query: 70 LEVGDDACDPKQAVSVAEKMAGARIPFVVGHFCSSTSIPASDAYAEGNVLQITPGSTNPQ 129 + +GDD DPKQ +SVA K + FVVGHF S SIPAS+ YAE +L+ITP +TNP Sbjct: 87 IVLGDDVSDPKQGISVANKFVADGVKFVVGHFNSGVSIPASEVYAENGILEITPAATNPV 146 Query: 130 FTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLADETKKAINAA 189 FTERGLWNTFR CGRDDQQG +A Y+ ++ VAIIHDKT YG+GLADETKKA NAA Sbjct: 147 FTERGLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQGLADETKKAANAA 206 Query: 190 GVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQGVNAVLMGG 249 GV E +YE GDKDF+AL+S+ K+ + +Y GG + EA LI+RQ +QG+ A L+ G Sbjct: 207 GVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSG 266 Query: 250 DALVDKQFAAIAGPLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYTLYSYAAFQI 309 D +V + A+IAG EG+L TF PDP + ++KFK G +P+ YTLYSYAA Q Sbjct: 267 DGIVSNELASIAGDAVEGTLNTFGPDPTLRPENKELVEKFKAAGFNPEAYTLYSYAAMQA 326 Query: 310 WSQAAARAQTTDAKKVAAAIKAGSWDTVLGKISYTPKGDITLIDYVVY--RRDKDGNYAE 367 + AA A + + +KVA A+K GS+ T LG+IS+ KGD L YV+Y ++ DG + Sbjct: 327 IAGAAKAAGSVEPEKVAEALKKGSFPTALGEISFDEKGDPKLPGYVMYEWKKGPDGKFTY 386 Query: 368 LPAG 371 + G Sbjct: 387 IQQG 390 >PA4913 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Pae Pseudomonas aeruginosa Length = 374 Score = 342 bits (878), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 179/363 (49%), Positives = 234/363 (64%), Gaps = 4/363 (1%) Query: 10 LALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAAGGVLGKKLK 69 LA+ + + LS A+A D+ + V GP TG+ ASFG+Q+ GA A DINAAGG+ G+K+K Sbjct: 13 LAVSSVMGLSTHALA-DVVIGVAGPHTGANASFGEQYWRGASQAAEDINAAGGINGEKIK 71 Query: 70 LEVGDDACDPKQAVSVAEKMAGA-RIPFVVGHFCSSTSIPASDAYAEGNVLQITPGSTNP 128 L DDAC+PKQAV+VA ++ + VVGHFCSS++IPAS+ Y E ++ ITPGSTNP Sbjct: 72 LVKADDACEPKQAVAVANRLVDQDKAIAVVGHFCSSSTIPASEVYDEAGIIAITPGSTNP 131 Query: 129 QFTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLADETKKAINA 188 Q TERGL FR+CGRDDQQG VA YI+ K VA+IHDK TYG+GLAD T+ +N Sbjct: 132 QVTERGLSGMFRMCGRDDQQGVVAGDYIVNVLKAKKVAVIHDKDTYGQGLADATRAQLNK 191 Query: 189 AGVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQGVNAVLMG 248 GVKE LYE T+G+KDF ALV++ + + VY GG + EA ++RQMREQG+ A M Sbjct: 192 LGVKEVLYEGLTRGEKDFNALVTKIRASGAEVVYFGGLHPEAGPLVRQMREQGLTARFMS 251 Query: 249 GDALVDKQFAAIAG--PLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYTLYSYAA 306 D +V + A AG +G L TF DPR A ++KF+ G +P+GYTLYSYA+ Sbjct: 252 DDGVVTDELATTAGGPQYVKGVLMTFGADPRLIPDGKAVVEKFRAGGFEPEGYTLYSYAS 311 Query: 307 FQIWSQAAARAQTTDAKKVAAAIKAGSWDTVLGKISYTPKGDITLIDYVVYRRDKDGNYA 366 Q + A A D K A +K+ TV+GK + KGD+ + DYVVY D G Y Sbjct: 312 IQSLAAAFNGAGANDPAKAAEWLKSHPVQTVMGKKEWDKKGDLKVSDYVVYEWDDKGKYH 371 Query: 367 ELP 369 +LP Sbjct: 372 QLP 374