BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0099.0011.p         (433 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc00712 [S] COG4093 Uncharacterized protein conserved in bacter...    74   1e-12

>SMc00712 [S] COG4093 Uncharacterized protein conserved in bacteria Sme
           Sinorhizobium meliloti
          Length = 337

 Score = 73.6 bits (179), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 43/278 (15%)

Query: 68  WSAFWFFAASQVGVQADAWRAQEAKAGRVYDCGDRSVAGYPFRFEVRCTDPSVMLVSQTA 127
           +SA WF AA Q+  +  A+  +    G   +C +  V G+PFR  + C    +    + A
Sbjct: 30  YSASWFLAADQIQKRLTAYLTKGQAIGFSGECAEMEVRGFPFRLGLFCDKVRLDDTRRGA 89

Query: 128 SPQMAFVARLAEILVVAQVYDPKLVIAEFKGPATIAERGAQPTLSVSWSKGRSSVVGLPA 187
           S      A    +   AQVY P   + E  GPA I       T+S  W+  R+SV    +
Sbjct: 90  S------ASFGALRTAAQVYQPGRAVLELDGPAEI-RVSPGVTISADWTLLRASVAATLS 142

Query: 188 VPQRASLVFDDLAIDRTGGATPAPLA------RVNHIELHGRQVDGSAPDSPAIETVLQI 241
              R SL +D+L      G   +PL         +H ELH RQ  G+   + +IE +   
Sbjct: 143 GIDRTSLAYDNLT-----GTARSPLTGKGLGFGASHGELHLRQNGGNLDAALSIEKL--- 194

Query: 242 AGGTLQDVHPLLAQPFNADIHARLNGLKDFSPKPWPDRFREIQAA--------GGSVEIQ 293
                 D  P LA P  AD+   L            D+   +QA         G   E++
Sbjct: 195 --DLRPDQGPSLAAP--ADVAMDLT---------VADKAEWLQAGTLPPHMLRGTRGELR 241

Query: 294 QSRIEQGDVLSVA-AGTLRLNAQGRIEGELQMTVAGLE 330
           Q  ++ G  +S    G   +N QG I GE  +T+A ++
Sbjct: 242 QLTLDAGSGMSAKLTGPFSVNDQGLISGEFSLTLANID 279