BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0099.0004.p         (100 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc00711 [E] COG0287 Prephenate dehydrogenase Sme Sinorhizobium ...   150   8e-37
CC2224 Non COG                                                        150   9e-37
BMEI0079 [E] COG0287 Prephenate dehydrogenase Bme Brucella melit...   147   6e-36
AGl2429 [E] COG0287 Prephenate dehydrogenase Atu Agrobacterium t...   143   1e-34
mll3535 [E] COG0287 Prephenate dehydrogenase Mlo Mesorhizobium loti   142   3e-34

>SMc00711 [E] COG0287 Prephenate dehydrogenase Sme Sinorhizobium meliloti
          Length = 307

 Score =  150 bits (378), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 75/100 (75%), Positives = 84/100 (84%), Gaps = 1/100 (1%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VTESEVIK+SA GFRDFTR+AASDPTMWRDV L NKDA+LEML  F+EDL+ L RAIR G
Sbjct: 209 VTESEVIKYSASGFRDFTRLAASDPTMWRDVCLHNKDAILEMLARFSEDLASLQRAIRWG 268

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGRPHANLKK 100
           DG+ LFD FTRTRAIRR IV+ GQD+A PDFGR HA  +K
Sbjct: 269 DGDKLFDLFTRTRAIRRSIVQAGQDTAMPDFGR-HAMDQK 307


>CC2224 Non COG
          Length = 312

 Score =  150 bits (378), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 71/93 (76%), Positives = 80/93 (86%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VTE+EVIK+SA GFRDFTRIAASDPTMWRD+F+ANKDAVLEMLG F EDL  ++RAIR G
Sbjct: 215 VTENEVIKYSASGFRDFTRIAASDPTMWRDIFVANKDAVLEMLGRFTEDLQAMSRAIRWG 274

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGR 93
           D + L  HFTRTRAIRRGIV  GQ+SA P+FGR
Sbjct: 275 DADTLHAHFTRTRAIRRGIVAAGQESAEPNFGR 307


>BMEI0079 [E] COG0287 Prephenate dehydrogenase Bme Brucella melitensis
          Length = 321

 Score =  147 bits (371), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 69/93 (74%), Positives = 80/93 (86%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VT+SEVIK+SA GFRDFTR+AASDPTMWRDV L NKDA+LEMLG F+EDL+ L R+IR G
Sbjct: 210 VTKSEVIKYSASGFRDFTRLAASDPTMWRDVCLHNKDAILEMLGRFSEDLASLQRSIRWG 269

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGR 93
           DGEALFD FTRTRA+ RGI++ GQ+   PDFGR
Sbjct: 270 DGEALFDLFTRTRAVHRGIIDAGQEVDTPDFGR 302


>AGl2429 [E] COG0287 Prephenate dehydrogenase Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 310

 Score =  143 bits (360), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 81/100 (81%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VTESEVIK+SA GFRDFTR+AASDPTMWRDV L NKDA+LEML  F+EDL+ L RAIR G
Sbjct: 211 VTESEVIKYSASGFRDFTRLAASDPTMWRDVCLHNKDAILEMLARFSEDLASLQRAIRWG 270

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGRPHANLKK 100
           +G+ LF+ F+RTR+IRR I+E GQD   PDFGR   + KK
Sbjct: 271 EGDKLFELFSRTRSIRRSIIEAGQDVDTPDFGRHALDQKK 310


>mll3535 [E] COG0287 Prephenate dehydrogenase Mlo Mesorhizobium loti
          Length = 311

 Score =  142 bits (357), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 78/93 (83%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VT++EVIK+SA GFRDFTR+AASDPTMWRDV L NKDA+LEML  F+EDL+ L RAIR G
Sbjct: 210 VTKTEVIKYSASGFRDFTRLAASDPTMWRDVCLHNKDAILEMLARFSEDLAFLQRAIRWG 269

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGR 93
           DG+ LFD FTRTRA+RR I+E GQD   PDFGR
Sbjct: 270 DGDKLFDLFTRTRAVRRSIIEAGQDIDVPDFGR 302