BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0098.0033.p (264 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DR1035 [E] COG0411 ABC-type branched-chain amino acid transport ... 240 3e-63 mlr5219 Non COG 239 7e-63 SP0752 [E] COG0411 ABC-type branched-chain amino acid transport ... 238 1e-62 TM1138 [E] COG0411 ABC-type branched-chain amino acid transport ... 229 7e-60 PAE2465 [E] COG0411 ABC-type branched-chain amino acid transport... 224 2e-58 >DR1035 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 279 Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 123/250 (49%), Positives = 163/250 (65%) Query: 4 LLTVENLSKRFGGLQAVADVSLRVAPGEICSVIGPNGAGKTTLFNMISGVLRPSGGRISF 63 LL V++L+K FGGL AV DV+ +V I SVIGPNGAGKTT FN+I+G+ P G ++ Sbjct: 18 LLDVQHLTKSFGGLTAVNDVTFQVPERRIISVIGPNGAGKTTFFNLITGIYAPDRGTVNL 77 Query: 64 DGIDLSTISPWKFAAVGIGRTFQNLALFKHGTVVENILTGRHTHLRSTVLDAVWFYGRTR 123 G L + P + GI RTFQN+ LF T ENI+ GR LR D+V R + Sbjct: 78 AGRSLVGLRPDQVVEAGISRTFQNIRLFPSMTAEENIMLGRGVRLRGGFWDSVLHTARFQ 137 Query: 124 KEEIAARQRVEHIIEFLEIEHIRDAVVGTLSYGQQKRVELARALACEPKLLLLDEMVSGM 183 K+E AR +++F+ + R + L YG Q+++E+ARALA PKL+LLDE +GM Sbjct: 138 KDEEEARNTARLMLDFVGLSKWRGELSTNLPYGDQRKLEIARALATTPKLILLDEPAAGM 197 Query: 184 NQEETEDIARFVLDIRDELGITVVMIEHEMRIVMDISDRIHVLNFGRKIAEGTPGEIRRD 243 N ETED+ + IRDELG+TVV+IEH+MR+VM +S+ I VLN+G K+AEG P EIR + Sbjct: 198 NPRETEDLKALIRAIRDELGVTVVLIEHDMRLVMTLSENITVLNYGSKLAEGLPHEIRNN 257 Query: 244 PAVAEAYLGS 253 P V AYLGS Sbjct: 258 PEVMTAYLGS 267 >mlr5219 Non COG Length = 272 Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 119/239 (49%), Positives = 163/239 (68%) Query: 14 FGGLQAVADVSLRVAPGEICSVIGPNGAGKTTLFNMISGVLRPSGGRISFDGIDLSTISP 73 FGG+ A+AD+ L V PGEI ++IGPNGAGK++L N+ISGV R G + DG+ + Sbjct: 23 FGGVVALADIDLSVRPGEIRAIIGPNGAGKSSLINVISGVYRADRGHVLLDGVRYGQVPT 82 Query: 74 WKFAAVGIGRTFQNLALFKHGTVVENILTGRHTHLRSTVLDAVWFYGRTRKEEIAARQRV 133 + A +G+ RTFQNLALFK +V++N+ +G +RS V GR+R E+ + R Sbjct: 83 QRLAHLGVTRTFQNLALFKGLSVLDNVASGLAYKVRSNFAGQVLGIGRSRGEQRDSLSRA 142 Query: 134 EHIIEFLEIEHIRDAVVGTLSYGQQKRVELARALACEPKLLLLDEMVSGMNQEETEDIAR 193 + I+EFL++ +RD + GTL YG QKRVELARAL EP+LLLLDE ++GM E ++A Sbjct: 143 DQILEFLDLTAVRDRLAGTLPYGLQKRVELARALVAEPRLLLLDEPMAGMTASEKSEMAS 202 Query: 194 FVLDIRDELGITVVMIEHEMRIVMDISDRIHVLNFGRKIAEGTPGEIRRDPAVAEAYLG 252 FV RD TVV+IEH++ +VM +SDRI VL++GRKIA+ TP E+R D V +AYLG Sbjct: 203 FVRAARDRFATTVVLIEHDVGVVMGLSDRIAVLDYGRKIADATPDEVRNDQRVIDAYLG 261 >SP0752 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 254 Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 114/252 (45%), Positives = 171/252 (67%) Query: 3 ALLTVENLSKRFGGLQAVADVSLRVAPGEICSVIGPNGAGKTTLFNMISGVLRPSGGRIS 62 ALL V+ L+K FGGL AV DV+L + GE+ +IGPNGAGKTTLFN+++GV PS G ++ Sbjct: 2 ALLEVKQLTKHFGGLTAVGDVTLELNEGELVGLIGPNGAGKTTLFNLLTGVYEPSEGTVT 61 Query: 63 FDGIDLSTISPWKFAAVGIGRTFQNLALFKHGTVVENILTGRHTHLRSTVLDAVWFYGRT 122 DG L+ SP+K A++G+GRTFQN+ LFK TV++N+L H + V + Sbjct: 62 LDGHLLNGKSPYKIASLGLGRTFQNIRLFKDLTVLDNVLIAFGNHHKQHVFTSFLRLPAF 121 Query: 123 RKEEIAARQRVEHIIEFLEIEHIRDAVVGTLSYGQQKRVELARALACEPKLLLLDEMVSG 182 K E + + +++ +++ + + LSYGQQ+R+E+ RALA EPK+L LDE +G Sbjct: 122 YKSEKELKAKALELLKIFDLDGDAETLAKNLSYGQQRRLEIVRALATEPKILFLDEPAAG 181 Query: 183 MNQEETEDIARFVLDIRDELGITVVMIEHEMRIVMDISDRIHVLNFGRKIAEGTPGEIRR 242 MN +ET ++ + I+DE IT+++IEH+M +VM++++RI+VL +GR IA+GTP EI+ Sbjct: 182 MNPQETAELTELIRRIKDEFKITIMLIEHDMNLVMEVTERIYVLEYGRLIAQGTPDEIKT 241 Query: 243 DPAVAEAYLGSQ 254 + V EAYLG + Sbjct: 242 NKRVIEAYLGGE 253 >TM1138 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 284 Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 116/272 (42%), Positives = 178/272 (65%), Gaps = 21/272 (7%) Query: 3 ALLTVENLSKRFGGLQAVADVSLRVAPGEICSVIGPNGAGKTTLFNMISGVLRPSGGRIS 62 LL +++++ +FGGL AV D + + GE+ +IGPNGAGKTT+FN+I+G+ P+ GRI Sbjct: 10 PLLLLDHVTMQFGGLVAVDDFTNEIREGELVGLIGPNGAGKTTVFNVITGIYTPTKGRIV 69 Query: 63 FDGIDLSTISPWKFAAVGIGRTFQNLALFKHGTVVENILTGRHTHLRSTVLDAV------ 116 F+ ID++ + P++ +GI RTFQN+ LF TV+EN+L +H L + D + Sbjct: 70 FNDIDITGLRPYQITHLGIARTFQNIRLFSDMTVLENVLVAQHHVLSNPDADRILVKHGK 129 Query: 117 --------WFY------GRTRKEEIAARQRVEHIIEFLEIEHIRDAVVGTLSYGQQKRVE 162 WF+ G +KE+ +R + +I+ + +E + +L YG+Q+++E Sbjct: 130 PRKGHGRFWFWRAVTKIGYLKKEK-EMVERAKDLIKRVGLEKVMYEKASSLPYGEQRKLE 188 Query: 163 LARALACEPKLLLLDEMVSGMNQEETEDIARFVLDIRDELGITVVMIEHEMRIVMDISDR 222 +ARALA EPKL+LLDE +GMN +ETED+ F+ IR + +TV++IEH+M++VM I +R Sbjct: 189 IARALATEPKLILLDEPAAGMNPKETEDLMEFIKQIRKDFNLTVLLIEHDMKVVMGICER 248 Query: 223 IHVLNFGRKIAEGTPGEIRRDPAVAEAYLGSQ 254 I V+++GR IAEGTP EI+ DP V EAYLG + Sbjct: 249 IIVMDYGRIIAEGTPKEIQNDPRVIEAYLGRE 280 >PAE2465 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Pya Pyrobaculum aerophilum Length = 259 Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 117/255 (45%), Positives = 179/255 (70%), Gaps = 6/255 (2%) Query: 4 LLTVENLSKRFGGLQAVADVSLRVAPGEICSVIGPNGAGKTTLFNMISGVLRPSGGRISF 63 LL ++ +FGG+ A+ DV+L V PG+I +++GPNGAGKTTL N+ SG ++P G++ + Sbjct: 3 LLGGYDIEVKFGGVTALRDVTLEVLPGKIHAIVGPNGAGKTTLLNVFSGFIKPRKGKVLY 62 Query: 64 DGIDLSTISPWKFAAVGIGRTFQNLA-LFKHGTVVENILTGRHTHLRSTVLD----AVWF 118 G D++ I P A +GIGRTFQ + +FKH TV+E ++TG ++ +V+D A+W Sbjct: 63 QGRDITRIKPHVRAKIGIGRTFQKTSEVFKHMTVLEVVMTGALASIKDSVIDIFTSALW- 121 Query: 119 YGRTRKEEIAARQRVEHIIEFLEIEHIRDAVVGTLSYGQQKRVELARALACEPKLLLLDE 178 +G ++E R+ E +IEF+E+ R +VG+L YG QK+V++ARALA +PK+LLLDE Sbjct: 122 HGPYFRKEEEIREIAEEVIEFMELYEYRHRIVGSLPYGLQKKVDVARALAGKPKILLLDE 181 Query: 179 MVSGMNQEETEDIARFVLDIRDELGITVVMIEHEMRIVMDISDRIHVLNFGRKIAEGTPG 238 +SG+ +EE ED+AR++++I LGITVV++EH++ +V D++D + V +FG KIAEG P Sbjct: 182 PMSGLTREEREDMARYIIEINKVLGITVVLVEHDLSLVYDLADVVSVFSFGSKIAEGPPA 241 Query: 239 EIRRDPAVAEAYLGS 253 EI + VA AY+G Sbjct: 242 EILKSEYVASAYMGK 256