BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0098.0010.p (474 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll1488 [C] COG0277 FAD/FMN-containing dehydrogenases Mlo Mesorh... 597 e-170 BMEI0599 [C] COG0277 FAD/FMN-containing dehydrogenases Bme Bruce... 590 e-168 SMc01455 [C] COG0277 FAD/FMN-containing dehydrogenases Sme Sinor... 577 e-164 AGc3718 [C] COG0277 FAD/FMN-containing dehydrogenases Atu Agroba... 576 e-164 RSc2664 [C] COG0277 FAD/FMN-containing dehydrogenases Rso Ralsto... 523 e-148 >mll1488 [C] COG0277 FAD/FMN-containing dehydrogenases Mlo Mesorhizobium loti Length = 575 Score = 597 bits (1539), Expect = e-170, Method: Compositional matrix adjust. Identities = 285/459 (62%), Positives = 348/459 (75%), Gaps = 3/459 (0%) Query: 15 QALKRAIDALAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVMAQETADIQDVVRICA 74 + + + L + G R T QA+R QHAHTTT++PTQ PD V + TA++Q++VR CA Sbjct: 113 EGIAAVLGILKQQLGERFQTGQAIRAQHAHTTTYIPTQAPDGVAFPETTAEVQEIVRACA 172 Query: 75 ANRVPVIAFGTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLDCVIQPGVTRKALNEH 134 A+RVPVIAFG G+SLEG NAP GGI +D MN++L V+ +DLDC ++PGVTR+ LN H Sbjct: 173 AHRVPVIAFGVGSSLEGHTNAPGGGISVDTSRMNRILAVNPQDLDCTVEPGVTREDLNRH 232 Query: 135 LRDQGLFFPIDPGADASLGGMTSTRASGTNAVRYGTMRENVLALKVVRGDGEIITTGTRA 194 LRD GLFFPIDPGA+ASLGGM +TRASGTNAVRYGTMRENVL+L V DGE +TTG RA Sbjct: 233 LRDTGLFFPIDPGANASLGGMAATRASGTNAVRYGTMRENVLSLTAVMADGETVTTGKRA 292 Query: 195 KKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFDTVRGACQATILAIQT 254 KKSSAGYDLT L VG+EGTLGII+ LT++L+GIP I+ C F +V AC A I IQ Sbjct: 293 KKSSAGYDLTRLLVGSEGTLGIITSLTLKLQGIPQAISGGVCPFPSVEAACNAVIATIQM 352 Query: 255 GIPVARIELLNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAEQSKNFRDIAAECGGG 314 GIPVARIEL+NA Q++A +YSKL PE+P L +EFHGS+ VAEQ++ F IA E GGG Sbjct: 353 GIPVARIELVNALQMRAMKNYSKLDYPESPCLFVEFHGSDAGVAEQAETFGMIAEENGGG 412 Query: 315 DFTWTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPISRLADCVTETEDDLK 374 F WT+ E+RTKLW+ARHDAYW+ LRPG ++TDVCVPISR A+CVTETE D+ Sbjct: 413 PFLWTSVAEERTKLWKARHDAYWASLTLRPGAK--GLSTDVCVPISRFAECVTETEADIA 470 Query: 375 RLNLLSPIVGHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERAQAMDGTCTGEHGIGQ 434 + L++PIVGH GDGNFH +L DVND E+A E+F+ RL RA AMDGTCTGEHGIGQ Sbjct: 471 EMGLIAPIVGHAGDGNFHVLVLMDVNDPKEIALSEKFVARLNLRAIAMDGTCTGEHGIGQ 530 Query: 435 GKQKYLQAELGPEALDAMRALKHALDPQNIFNPGKIVPA 473 GK +L+ ELG +D MR++K ALDPQNI NPGKI+PA Sbjct: 531 GKIGFLRPELG-HGVDIMRSIKQALDPQNIMNPGKILPA 568 >BMEI0599 [C] COG0277 FAD/FMN-containing dehydrogenases Bme Brucella melitensis Length = 468 Score = 590 bits (1521), Expect = e-168, Method: Compositional matrix adjust. Identities = 290/452 (64%), Positives = 343/452 (75%), Gaps = 3/452 (0%) Query: 20 AIDALAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVMAQETADIQDVVRICAANRVP 79 A+ L RFG R T QA+REQH HTTT++PTQ PD VV A+ T D+QDVVRICA +RVP Sbjct: 19 AVGILKQRFGERAQTGQAIREQHGHTTTYVPTQAPDIVVFAENTQDVQDVVRICAEHRVP 78 Query: 80 VIAFGTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLDCVIQPGVTRKALNEHLRDQG 139 V+AFG G+SLEGQVNAPAGG+ +D+ MN+V+ VHAEDLDCV++PGVTR+ALNE+LRD G Sbjct: 79 VVAFGAGSSLEGQVNAPAGGVSLDMTHMNRVIAVHAEDLDCVVEPGVTRRALNEYLRDTG 138 Query: 140 LFFPIDPGADASLGGMTSTRASGTNAVRYGTMRENVLALKVVRGDGEIITTGTRAKKSSA 199 LFFPIDPGA+A+LGGM STRASGTNAVRYGTMRENVLALK V DG +I T R KK++A Sbjct: 139 LFFPIDPGANATLGGMASTRASGTNAVRYGTMRENVLALKAVMPDGRLIETSKRVKKTAA 198 Query: 200 GYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFDTVRGACQATILAIQTGIPVA 259 GYDLT L +GAEGTLGII+ELT++L+GIP I+ C F V AC+ I IQ GIPVA Sbjct: 199 GYDLTRLLIGAEGTLGIITELTLKLQGIPQAISGGICPFPDVDSACRTVIETIQMGIPVA 258 Query: 260 RIELLNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAEQSKNFRDIAAECGGGDFTWT 319 RIEL+N Q++A +SKL P L +EFHG+E V EQ++ F +IAA GGG F WT Sbjct: 259 RIELVNTLQMQALIMHSKLPYEAQPYLFVEFHGTESGVGEQAELFGEIAAGHGGGAFQWT 318 Query: 320 TKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPISRLADCVTETEDDLKRLNLL 379 E+R +LW+ARH+AY + LRPG V+TDVCVPISRLADC+ ETE DL L+ Sbjct: 319 HDAEERDRLWRARHEAYLASFLLRPG--CKGVSTDVCVPISRLADCIGETEKDLAETGLI 376 Query: 380 SPIVGHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERAQAMDGTCTGEHGIGQGKQKY 439 +PIVGHVGDGNFH LL D +D EM R E FM RL +RA AM+GTCTGEHGIGQGK KY Sbjct: 377 APIVGHVGDGNFHLLLLLDTDDASEMERAEAFMDRLAKRAIAMEGTCTGEHGIGQGKMKY 436 Query: 440 LQAELGPEALDAMRALKHALDPQNIFNPGKIV 471 L ELG A D MRA+K ALDP NI NPGKI+ Sbjct: 437 LAMELGA-ATDYMRAIKKALDPDNIMNPGKIL 467 >SMc01455 [C] COG0277 FAD/FMN-containing dehydrogenases Sme Sinorhizobium meliloti Length = 468 Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust. Identities = 275/447 (61%), Positives = 343/447 (76%), Gaps = 3/447 (0%) Query: 24 LAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVMAQETADIQDVVRICAANRVPVIAF 83 LA RFG+R T +A+R QHA+TTT++P Q PDAVV + A+++++V I +RVP+I F Sbjct: 23 LATRFGDRFQTGEAIRAQHANTTTYIPAQLPDAVVFPESAAEVREIVEIACEHRVPLIPF 82 Query: 84 GTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLDCVIQPGVTRKALNEHLRDQGLFFP 143 GTG+SLEG VNAP GGI +D+ MN+VL V+AEDLDC ++PGVTR+ LN +LRD GLFFP Sbjct: 83 GTGSSLEGHVNAPHGGISVDMMRMNRVLAVNAEDLDCTVEPGVTREELNSYLRDTGLFFP 142 Query: 144 IDPGADASLGGMTSTRASGTNAVRYGTMRENVLALKVVRGDGEIITTGTRAKKSSAGYDL 203 IDPGA+AS+GGM STRASGTNAVRYGTM+ENVLA+ V G I T RA+KSSAGYDL Sbjct: 143 IDPGANASIGGMASTRASGTNAVRYGTMKENVLAVTAVVAGGREIRTAHRARKSSAGYDL 202 Query: 204 THLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFDTVRGACQATILAIQTGIPVARIEL 263 T LFVGAEGTLGI++ +T+RL+GIP+ I+ C F T+ AC A IL IQ+GIPVARIEL Sbjct: 203 TRLFVGAEGTLGIVTSITLRLQGIPEVISGGVCPFPTIADACNAVILTIQSGIPVARIEL 262 Query: 264 LNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAEQSKNFRDIAAECGGGDFTWTTKPE 323 L+A Q+KACN+YS L+ ETP L +EFHG+ V QS+ F +IA+E G F WTT PE Sbjct: 263 LDALQMKACNAYSGLTYQETPTLFVEFHGNGESVELQSRQFAEIASEFGSTGFIWTTNPE 322 Query: 324 DRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPISRLADCVTETEDDLKRLNLLSPIV 383 +R +LW+ARH+AYW+ K+L PG +I ++TDVCVPISRLADCV T +D+ L++PIV Sbjct: 323 ERARLWKARHNAYWAQKSLMPGRAI--LSTDVCVPISRLADCVAATHEDIAAHGLVAPIV 380 Query: 384 GHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERAQAMDGTCTGEHGIGQGKQKYLQAE 443 GH GDGNFH LL D D ++A+ E F+ RL RA +MDGTCTGEHGIGQGK +L AE Sbjct: 381 GHAGDGNFHVGLLFDDKDAADVAQAEAFVERLNARALSMDGTCTGEHGIGQGKMPFLAAE 440 Query: 444 LGPEALDAMRALKHALDPQNIFNPGKI 470 LG +ALD MR +K +LDP NIFNPGKI Sbjct: 441 LG-DALDLMRQIKRSLDPDNIFNPGKI 466 >AGc3718 [C] COG0277 FAD/FMN-containing dehydrogenases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 477 Score = 576 bits (1484), Expect = e-164, Method: Compositional matrix adjust. Identities = 274/456 (60%), Positives = 341/456 (74%), Gaps = 3/456 (0%) Query: 15 QALKRAIDALAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVMAQETADIQDVVRICA 74 + + A+ L + G++L T QA REQH HTTT+L Q PD VV A+ D++ VV+ CA Sbjct: 21 EGIASALAVLKQQLGDKLQTGQAFREQHGHTTTYLTLQAPDGVVFAESADDVKAVVKACA 80 Query: 75 ANRVPVIAFGTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLDCVIQPGVTRKALNEH 134 +VPVI FGTG+SLEGQVNAP GGICID MN+++EV+AEDLD ++PGVTR+ LN + Sbjct: 81 QYKVPVIPFGTGSSLEGQVNAPNGGICIDFSRMNRIIEVNAEDLDVTVEPGVTREDLNVY 140 Query: 135 LRDQGLFFPIDPGADASLGGMTSTRASGTNAVRYGTMRENVLALKVVRGDGEIITTGTRA 194 LRD GLFFPIDPGA+AS+GGM STRASGTNAVRYGTM++NVLA+ V +GE I T RA Sbjct: 141 LRDTGLFFPIDPGANASIGGMASTRASGTNAVRYGTMKDNVLAVTAVVANGEEIRTARRA 200 Query: 195 KKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFDTVRGACQATILAIQT 254 +KSSAGYDLT LFVGAEGTLG+I+ +T+RL+GIP+ I C+FD+++ AC A I+ IQ Sbjct: 201 RKSSAGYDLTRLFVGAEGTLGVITSVTLRLQGIPEKITGGVCTFDSIKAACDAVIMTIQM 260 Query: 255 GIPVARIELLNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAEQSKNFRDIAAECGGG 314 G+PVARIELL+ QV+ACN+YS L+ E P L +EFHG+E A QS+ F +IAAECG Sbjct: 261 GVPVARIELLDEVQVRACNAYSGLNYAEKPTLFVEFHGTEETAALQSQQFAEIAAECGSV 320 Query: 315 DFTWTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPISRLADCVTETEDDLK 374 DF WT +R KLW+ARHDAYW+ +AL P + ++TDVCVPISRLADCV ET+ D+ Sbjct: 321 DFRWTGDAAERNKLWKARHDAYWASRALAP--HLDGLSTDVCVPISRLADCVVETQRDIA 378 Query: 375 RLNLLSPIVGHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERAQAMDGTCTGEHGIGQ 434 L+PIVGH GDGNFH +L D D + +A+ E F+ RL RA AMDGTCTGEHGIGQ Sbjct: 379 ENGFLAPIVGHAGDGNFHVLILFDGKDAESVAKTEAFVARLNRRAIAMDGTCTGEHGIGQ 438 Query: 435 GKQKYLQAELGPEALDAMRALKHALDPQNIFNPGKI 470 GK +L E G ALD MRA+K +LDP NIFNPGK+ Sbjct: 439 GKMSFLAEEAG-NALDLMRAIKTSLDPDNIFNPGKL 473 >RSc2664 [C] COG0277 FAD/FMN-containing dehydrogenases Rso Ralstonia solanacearum Length = 472 Score = 523 bits (1348), Expect = e-148, Method: Compositional matrix adjust. Identities = 263/462 (56%), Positives = 326/462 (70%), Gaps = 7/462 (1%) Query: 11 RPEPQALKRAIDALAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVMAQETADIQDVV 70 +P P A+ +DAL ARFG+R+ TS AVR H + PDAVV AQ T D+ V Sbjct: 13 KPIPPAM---LDALRARFGDRVSTSDAVRAHHGRDESAYDPMLPDAVVFAQTTEDVVAVA 69 Query: 71 RICAANRVPVIAFGTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLDCVIQPGVTRKA 130 R+C + +P+I FG G+SLEG + A AGG+ +DL MN+VL VH EDL ++PGVTRK Sbjct: 70 RLCHEHAIPLIPFGAGSSLEGHLLAVAGGVTLDLSQMNRVLSVHPEDLTVTVEPGVTRKQ 129 Query: 131 LNEHLRDQGLFFPIDPGADASLGGMTSTRASGTNAVRYGTMRENVLALKVVRGDGEIITT 190 LN +RD GLFFPIDPGADAS+GGM +TRASGTNAVRYGTMRENVL L VV DG +I T Sbjct: 130 LNADIRDTGLFFPIDPGADASIGGMCATRASGTNAVRYGTMRENVLNLTVVTADGRVIKT 189 Query: 191 GTRAKKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFDTVRGACQATIL 250 RA+KSSAGYDLT LF+G+EGTLGII+E+T+RL P+ ++AA C+F + A A I Sbjct: 190 ANRARKSSAGYDLTRLFIGSEGTLGIITEITLRLYPQPEAVSAAVCAFPGMGDAVCAVID 249 Query: 251 AIQTGIPVARIELLNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAEQSKNFRDIAAE 310 IQ G+PVAR+E ++A ++A N Y KLSLPE P L EFHGS V EQ++ + IAAE Sbjct: 250 TIQMGVPVARVEFVDALAIRAINRYDKLSLPELPTLFFEFHGSAHGVQEQAETVQAIAAE 309 Query: 311 CGGGDFTWTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPISRLADCVTETE 370 G F W T+PEDR++LW ARH+AY++ L+PG V TDVCVPISRLADCV ETE Sbjct: 310 HRGQGFEWATRPEDRSRLWNARHNAYFAFLQLKPG--CRAVTTDVCVPISRLADCVVETE 367 Query: 371 DDL--KRLNLLSPIVGHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERAQAMDGTCTG 428 DL L L +PIVGHVGDGNFH +LL D + +E+ E R+V RA AMDGTCTG Sbjct: 368 QDLLASPLKLPAPIVGHVGDGNFHVALLVDPDKPEELEEAERINRRIVARAIAMDGTCTG 427 Query: 429 EHGIGQGKQKYLQAELGPEALDAMRALKHALDPQNIFNPGKI 470 EHG+G K +L AE G +A+D MR++K ALDP++I NPGKI Sbjct: 428 EHGVGLHKMDFLVAEHGDDAIDLMRSVKQALDPKHILNPGKI 469