BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0097.0002.p         (151 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MT3742 [L] COG3328 Transposase and inactivated derivatives MtC M...   134   8e-32
Rv3640c [L] COG3328 Transposase and inactivated derivatives Mtu ...   134   8e-32
MT3107 [L] COG3328 Transposase and inactivated derivatives MtC M...   112   3e-25
Rv3115 [L] COG3328 Transposase and inactivated derivatives Mtu M...   112   4e-25
Rv3023c [L] COG3328 Transposase and inactivated derivatives Mtu ...   112   4e-25

>MT3742 [L] COG3328 Transposase and inactivated derivatives MtC
           Mycobacterium tuberculosis CDC1551
          Length = 409

 Score =  134 bits (337), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 93/148 (62%), Gaps = 3/148 (2%)

Query: 1   VHFMRNALAHAGKSGRRVVSAFIATAFAQDDAEAARAQWRRVADQLRPKVPKLAAFLDEA 60
           VHF RN LAH  K    +V++     F+  DAEA  A W  V D+L    PK+   +D+A
Sbjct: 256 VHFARNLLAHVPKDKADMVASMFRMIFSAPDAEAVHATWEGVRDRLAASFPKIGPLMDDA 315

Query: 61  ETDVLAYMSFPAAHRAKLHSTNPLERVNGEIKRRTEVVGIFPNEDAITRLVGAILLEQND 120
             +VLA+ +FP AH  K+ STNPLER+N EIKRR+ VVGIFPN  A+ RLVGA+L + +D
Sbjct: 316 RAEVLAFTAFPKAHWQKIWSTNPLERINKEIKRRSRVVGIFPNPAAVIRLVGAVLADMHD 375

Query: 121 EWAVQRGRYMTLETIA---PLSDDPTVS 145
           EW     RY++  ++A   P SD+  V+
Sbjct: 376 EWQASERRYLSEASMALLYPDSDNAVVA 403


>Rv3640c [L] COG3328 Transposase and inactivated derivatives Mtu
           Mycobacterium tuberculosis H37Rv
          Length = 409

 Score =  134 bits (336), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 93/148 (62%), Gaps = 3/148 (2%)

Query: 1   VHFMRNALAHAGKSGRRVVSAFIATAFAQDDAEAARAQWRRVADQLRPKVPKLAAFLDEA 60
           VHF RN LAH  K    +V++     F+  DAEA  A W  V D+L    PK+   +D+A
Sbjct: 256 VHFARNLLAHVPKDKADMVASMFRMIFSAPDAEAVHATWEGVRDRLAASFPKIGPLMDDA 315

Query: 61  ETDVLAYMSFPAAHRAKLHSTNPLERVNGEIKRRTEVVGIFPNEDAITRLVGAILLEQND 120
             +VLA+ +FP AH  K+ STNPLER+N EIKRR+ VVGIFPN  A+ RLVGA+L + +D
Sbjct: 316 RAEVLAFTAFPKAHWQKIWSTNPLERINKEIKRRSRVVGIFPNPAAVIRLVGAVLADMHD 375

Query: 121 EWAVQRGRYMTLETIA---PLSDDPTVS 145
           EW     RY++  ++A   P SD+  V+
Sbjct: 376 EWQASERRYLSEASMALLYPDSDNAVVA 403


>MT3107 [L] COG3328 Transposase and inactivated derivatives MtC
           Mycobacterium tuberculosis CDC1551
          Length = 415

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 2   HFMRNALAHAGKSGRRVVSAFIATAFAQDDAEAARAQWRRVADQLRPKVPKLAAFLDEAE 61
           H+  N +A   K     V   + + + Q DAE+  AQ+ RV D L  K+P +A  LD A 
Sbjct: 257 HYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTAR 316

Query: 62  TDVLAYMSFPAAHRAKLHSTNPLERVNGEIKRRTEVVGIFPNEDAITRLVGAILLEQNDE 121
           TD+LA+ +FP     ++ S NP ER+N E++RRT+VVGIFP+  +I RLVGA+L EQ+DE
Sbjct: 317 TDLLAFTAFPKKIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDE 376

Query: 122 WAVQRGRYMTLETI 135
           W ++  RY+ LE +
Sbjct: 377 W-IEGRRYLGLEVL 389


>Rv3115 [L] COG3328 Transposase and inactivated derivatives Mtu
           Mycobacterium tuberculosis H37Rv
          Length = 415

 Score =  112 bits (279), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 2   HFMRNALAHAGKSGRRVVSAFIATAFAQDDAEAARAQWRRVADQLRPKVPKLAAFLDEAE 61
           H+  N +A   K     V   + + + Q DAE+  AQ+ RV D L  K+P +A  LD A 
Sbjct: 257 HYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTAR 316

Query: 62  TDVLAYMSFPAAHRAKLHSTNPLERVNGEIKRRTEVVGIFPNEDAITRLVGAILLEQNDE 121
           TD+LA+ +FP     ++ S NP ER+N E++RRT+VVGIFP+  +I RLVGA+L EQ+DE
Sbjct: 317 TDLLAFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDE 376

Query: 122 WAVQRGRYMTLETI 135
           W ++  RY+ LE +
Sbjct: 377 W-IEGRRYLGLEVL 389


>Rv3023c [L] COG3328 Transposase and inactivated derivatives Mtu
           Mycobacterium tuberculosis H37Rv
          Length = 415

 Score =  112 bits (279), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 2   HFMRNALAHAGKSGRRVVSAFIATAFAQDDAEAARAQWRRVADQLRPKVPKLAAFLDEAE 61
           H+  N +A   K     V   + + + Q DAE+  AQ+ RV D L  K+P +A  LD A 
Sbjct: 257 HYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTAR 316

Query: 62  TDVLAYMSFPAAHRAKLHSTNPLERVNGEIKRRTEVVGIFPNEDAITRLVGAILLEQNDE 121
           TD+LA+ +FP     ++ S NP ER+N E++RRT+VVGIFP+  +I RLVGA+L EQ+DE
Sbjct: 317 TDLLAFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDE 376

Query: 122 WAVQRGRYMTLETI 135
           W ++  RY+ LE +
Sbjct: 377 W-IEGRRYLGLEVL 389