BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0096.0025.p (234 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI0840 [KT] COG1974 SOS-response transcriptional repressors (R... 330 2e-90 SMc01183 [KT] COG1974 SOS-response transcriptional repressors (R... 323 1e-88 AGc2577 [KT] COG1974 SOS-response transcriptional repressors (Re... 323 2e-88 mlr0626 [KT] COG1974 SOS-response transcriptional repressors (Re... 314 1e-85 CC1902 Non COG 270 3e-72 >BMEI0840 [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) Bme Brucella melitensis Length = 240 Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 165/240 (68%), Positives = 198/240 (82%), Gaps = 6/240 (2%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQ+ELL FI+ERLKE G+PPSFDEMK+ALDL SKSGIHRLITALEERGFIRRLPNR Sbjct: 1 MLTRKQHELLLFIHERLKETGIPPSFDEMKEALDLASKSGIHRLITALEERGFIRRLPNR 60 Query: 61 ARAIEVIKLPELSAGGGNGRRGFTPSVIEGTLGRRASTPPI----AEDDGNRP--VAVPV 114 ARA+EV++LP+ A G + ++ F PSVIEG+LG+ AS P+ A + P V+VPV Sbjct: 61 ARALEVLRLPDSIAPGLSPQKKFAPSVIEGSLGKVASVQPVRPAPAPQNSEAPATVSVPV 120 Query: 115 MGRIAAGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALIQRNDV 174 MGRIAAG PI A+Q ++H +S+PP+M+GAGEHYALEV+GDSM+DAGI DGD +I+R D Sbjct: 121 MGRIAAGVPISAIQNQTHMLSLPPEMIGAGEHYALEVKGDSMIDAGIFDGDTIIIKRGDT 180 Query: 175 ANTGDIVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIGLYRKY 234 AN G+IVVAL+DEEEATLKRFRR GASIALE AN AYE RI P+RV +QGKL+GL R+Y Sbjct: 181 ANPGEIVVALVDEEEATLKRFRREGASIALEAANPAYETRIFGPDRVHVQGKLVGLIRRY 240 >SMc01183 [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) Sme Sinorhizobium meliloti Length = 238 Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 168/237 (70%), Positives = 195/237 (82%), Gaps = 3/237 (1%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQ ELL FI+ER+KE+GVPPSFDEMKDALDL SKSGIHRLITALEERGFIRRLPNR Sbjct: 1 MLTRKQQELLLFIHERMKESGVPPSFDEMKDALDLASKSGIHRLITALEERGFIRRLPNR 60 Query: 61 ARAIEVIKLPELSAGGGNGRRGFTPSVIEGTLGRRASTPPIAEDDGNR---PVAVPVMGR 117 ARA+EVIKLPE AG RRGF+PSVIEG+LG+ A+ PP + VAVPVMGR Sbjct: 61 ARALEVIKLPEAYAGASQVRRGFSPSVIEGSLGKPAAPPPAPKPAPPAEAASVAVPVMGR 120 Query: 118 IAAGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALIQRNDVANT 177 IAAG PI A+Q H ISVP +M+G+GEHYALE++GDSM++AGILDGD +I+ A+ Sbjct: 121 IAAGVPISAIQNNMHDISVPVEMIGSGEHYALEIKGDSMIEAGILDGDTVIIRNGSTASP 180 Query: 178 GDIVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIGLYRKY 234 GDIVVALID+EEATLKRFRR+GASIALE AN AYE RI P+RV+IQG+L+GL R+Y Sbjct: 181 GDIVVALIDDEEATLKRFRRKGASIALEAANPAYETRIFGPDRVKIQGRLVGLIRRY 237 >AGc2577 [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 240 Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 163/239 (68%), Positives = 191/239 (79%), Gaps = 5/239 (2%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQ ELL FI+ER+KE+GVPPSFDEMKDALDL SKSGIHRLITALEERGFIRRLPNR Sbjct: 1 MLTRKQQELLLFIHERMKESGVPPSFDEMKDALDLASKSGIHRLITALEERGFIRRLPNR 60 Query: 61 ARAIEVIKLPELSAGGGNGRRGFTPSVIEGTLGRRASTPPIAE-----DDGNRPVAVPVM 115 ARA+EVIKLPE G +RGF+PSVIEG+LG+ P +D +PVM Sbjct: 61 ARALEVIKLPEAYTPGARPQRGFSPSVIEGSLGKPKEPEPAPAVKAPANDFAGAATIPVM 120 Query: 116 GRIAAGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALIQRNDVA 175 GRIAAG PI A+Q +H ++VP DMLG+GEHYALEV+GDSM++AGI DGD +I+ + A Sbjct: 121 GRIAAGVPISAIQNNTHDLAVPVDMLGSGEHYALEVKGDSMIEAGIFDGDTVIIRNGNTA 180 Query: 176 NTGDIVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIGLYRKY 234 N GDIVVAL+D+EEATLKRFRR+GASIALE AN AYE RI P+RV+IQGKL+GL R+Y Sbjct: 181 NPGDIVVALVDDEEATLKRFRRKGASIALEAANPAYETRIFGPDRVKIQGKLVGLIRRY 239 >mlr0626 [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) Mlo Mesorhizobium loti Length = 245 Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 163/245 (66%), Positives = 199/245 (81%), Gaps = 11/245 (4%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQ+ELL FI+ERLKE+G+PPSFDEMK+ALDL SKSGIHRLITALEERGFIRRLPNR Sbjct: 1 MLTRKQHELLMFIHERLKESGIPPSFDEMKEALDLASKSGIHRLITALEERGFIRRLPNR 60 Query: 61 ARAIEVIKLPELSAGGGNGRRGFTPSVIEGTLGRRA---------STPPIA--EDDGNRP 109 ARA+EV++LP+ A G N + F+PSVI+G+LG+ S P A +DD Sbjct: 61 ARALEVLRLPDSIAPGLNAAKKFSPSVIQGSLGQGGLGRQIKPAPSRLPAAGNDDDAVSA 120 Query: 110 VAVPVMGRIAAGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALI 169 V++PVMGRIAAG PI+A+Q ++H+ISVPPDM+ GEHYALEV+GDSM+DAGI DGD +I Sbjct: 121 VSIPVMGRIAAGVPIDAIQHQTHSISVPPDMIMGGEHYALEVKGDSMIDAGIFDGDTVII 180 Query: 170 QRNDVANTGDIVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIG 229 + D A+ G+IVVAL+DEEEATLKRFRR+GASIALE AN AYE RI P+RV++QGKL+G Sbjct: 181 RNADTASPGEIVVALVDEEEATLKRFRRKGASIALEAANPAYETRIFGPDRVKVQGKLVG 240 Query: 230 LYRKY 234 L R+Y Sbjct: 241 LIRRY 245 >CC1902 Non COG Length = 245 Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 143/236 (60%), Positives = 177/236 (75%), Gaps = 5/236 (2%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQ+ELL FI+ER+KE GV PSFDEMK+ALDL SKSGIHRLITALEERGFIRRL +R Sbjct: 12 MLTRKQHELLMFIHERIKETGVSPSFDEMKEALDLASKSGIHRLITALEERGFIRRLAHR 71 Query: 61 ARAIEVIKLPELSAGGG--NGRRGFTPSVIEGTLGRRASTPPIAEDDGNRPVAVPVMGRI 118 ARA+EV+KLP+ + GR F P V EG + P A + +R +P++GRI Sbjct: 72 ARALEVVKLPQQATAAAPPKGRGAFRPQVFEGGGAPPPAASPAAAANDSR--ELPILGRI 129 Query: 119 AAGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALIQRNDVANTG 178 AAGTPI+A+Q + VP MLGAGEHY LEV+GDSM++AGILDGD +I++ D A +G Sbjct: 130 AAGTPIDAIQHERERLPVPEAMLGAGEHYVLEVQGDSMIEAGILDGDYVIIKKGDTATSG 189 Query: 179 DIVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIGLYRKY 234 +IVVAL+ EEATLKR R++G SIALE AN YE RI P++V +QGKL+GL R+Y Sbjct: 190 EIVVALVG-EEATLKRLRKKGGSIALEAANPKYETRIFGPDQVEVQGKLVGLIRRY 244