BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0096.0014.p         (119 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RC0966 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases Rco...   132   1e-31
BMEI0837 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases B...   128   3e-30
RP623 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases Rpr ...   127   9e-30
mlr0628 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases Ml...   123   1e-28
CC1905 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases Ccr...   116   1e-26

>RC0966 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases Rco
          Rickettsia conorii
          Length = 513

 Score =  132 bits (333), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 75/97 (77%), Gaps = 5/97 (5%)

Query: 1  MTNSVVTRFAPSPTGFLHIGGARTALFNWLYARKLGGKMLLRIEDTDRERSTKEAIDAIL 60
          M N+V+TRFAPSPTGFLHIG ARTALFN+L+AR   GK LLRIEDTD+ERSTKEA++AI 
Sbjct: 1  MNNNVITRFAPSPTGFLHIGSARTALFNYLFARHHNGKFLLRIEDTDKERSTKEAVEAIF 60

Query: 61 DGLKWLELDWDGEVIYXRPPPRGRRKPARRRARLLLL 97
           GLKWL LDW+GEVI+     + +R    + A L LL
Sbjct: 61 SGLKWLGLDWNGEVIF-----QSKRNNLYKEAALKLL 92


>BMEI0837 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases Bme Brucella
           melitensis
          Length = 501

 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 68/82 (82%), Gaps = 2/82 (2%)

Query: 1   MTNSVVTRFAPSPTGFLHIGGARTALFNWLYARKLGGKMLLRIEDTDRERSTKEAIDAIL 60
           M+  V+TRFAPSPTG+LHIGGARTALFNWLYA+  GGKMLLRIEDTDRERST+ A  AIL
Sbjct: 29  MSKPVITRFAPSPTGYLHIGGARTALFNWLYAKHCGGKMLLRIEDTDRERSTEAATAAIL 88

Query: 61  DGLKWLELDWDGEVI--YXRPP 80
           DGL WL LDWDGE I  + R P
Sbjct: 89  DGLTWLGLDWDGEAISQFERAP 110


>RP623 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases Rpr
          Rickettsia prowazekii
          Length = 470

 Score =  127 bits (318), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 61/97 (62%), Positives = 74/97 (76%), Gaps = 6/97 (6%)

Query: 1  MTNSVVTRFAPSPTGFLHIGGARTALFNWLYARKLGGKMLLRIEDTDRERSTKEAIDAIL 60
          MTN ++TRFAPSPTGFLHIG ARTALFN+L+AR   GK  LRIEDTD++RSTKEA++AI 
Sbjct: 1  MTN-IITRFAPSPTGFLHIGSARTALFNYLFARHNNGKFFLRIEDTDKKRSTKEAVEAIF 59

Query: 61 DGLKWLELDWDGEVIYXRPPPRGRRKPARRRARLLLL 97
           GLKWL L+WDGEVI+     + +R    + A L LL
Sbjct: 60 SGLKWLGLNWDGEVIF-----QSKRNSLYKEAALKLL 91


>mlr0628 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases Mlo
          Mesorhizobium loti
          Length = 474

 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/82 (71%), Positives = 66/82 (80%), Gaps = 2/82 (2%)

Query: 1  MTNSVVTRFAPSPTGFLHIGGARTALFNWLYARKLGGKMLLRIEDTDRERSTKEAIDAIL 60
          M++ VVTRFAPSPTG+LHIGGARTALFNWLYA+  GG MLLRIEDTDRERST  A  AIL
Sbjct: 1  MSDKVVTRFAPSPTGYLHIGGARTALFNWLYAKHTGGTMLLRIEDTDRERSTAAATAAIL 60

Query: 61 DGLKWLELDWDGEVI--YXRPP 80
          DGL WL L WDG+ +  + R P
Sbjct: 61 DGLSWLGLGWDGDAVSQFERAP 82


>CC1905 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases Ccr
          Caulobacter vibrioides
          Length = 470

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 61/72 (84%)

Query: 5  VVTRFAPSPTGFLHIGGARTALFNWLYARKLGGKMLLRIEDTDRERSTKEAIDAILDGLK 64
          VVTRFAPSPTGFLHIGGARTALFNWLYAR  GGK L+R+EDTDRERST+ A+ AI +GL 
Sbjct: 9  VVTRFAPSPTGFLHIGGARTALFNWLYARHTGGKFLIRVEDTDRERSTEAAVAAIFEGLD 68

Query: 65 WLELDWDGEVIY 76
          WL L  D EVI+
Sbjct: 69 WLGLKSDDEVIF 80