BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0096.0012.p (433 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc02087 [C] COG0372 Citrate synthase Sme Sinorhizobium meliloti 731 0.0 BMEI0836 [C] COG0372 Citrate synthase Bme Brucella melitensis 728 0.0 mlr0629 [C] COG0372 Citrate synthase Mlo Mesorhizobium loti 724 0.0 AGc2572 [C] COG0372 Citrate synthase Atu Agrobacterium tumefacie... 723 0.0 CC1906 [C] COG0372 Citrate synthase Ccr Caulobacter vibrioides 653 0.0 >SMc02087 [C] COG0372 Citrate synthase Sme Sinorhizobium meliloti Length = 429 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/428 (78%), Positives = 376/428 (87%) Query: 5 SSKTATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSKITYID 64 S K+AT+T G K+ D P+ SG++GPDV+DIG LY Q +FTYDPGFTST SC+SKITYID Sbjct: 2 SEKSATVTFGGKSADLPVRSGSIGPDVVDIGSLYKQTTMFTYDPGFTSTASCESKITYID 61 Query: 65 GDAGVLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHEQMARF 124 GD GVL +RG+PIEQLAEHGDFLE CYLLLYG+LPT AQK DFDYRV HHTMVHEQM+RF Sbjct: 62 GDEGVLLHRGFPIEQLAEHGDFLEVCYLLLYGELPTKAQKADFDYRVTHHTMVHEQMSRF 121 Query: 125 FQGFRRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMAYKYTI 184 F GFRRDAHPMA+M VGAL+AFYHDSTDI DP QRM+AS+RMIAK+PT+AAMAYKY I Sbjct: 122 FTGFRRDAHPMAVMCGCVGALSAFYHDSTDITDPHQRMVASLRMIAKMPTIAAMAYKYHI 181 Query: 185 GQPFVYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNASTSTVRI 244 GQPFVYPKN L +A NFL MCFAVPCEEY +NPVLA A+D+IFILHADHEQNASTSTVR+ Sbjct: 182 GQPFVYPKNDLDYASNFLRMCFAVPCEEYVVNPVLARAMDRIFILHADHEQNASTSTVRL 241 Query: 245 AGSSGANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKNSEVRL 304 AGSSGANPFACIAAGIACLWGPAHGGANEAALNML +IG V+ IP++I K KDKN RL Sbjct: 242 AGSSGANPFACIAAGIACLWGPAHGGANEAALNMLAEIGTVDRIPEYITKAKDKNDPFRL 301 Query: 305 MGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFIDRKLYP 364 MGFGHRVYKNYDPRAKIMQK H VL E GH DDP+L+VAMELE+IAL+D YFI++KLYP Sbjct: 302 MGFGHRVYKNYDPRAKIMQKTTHEVLAELGHKDDPLLEVAMELERIALTDEYFIEKKLYP 361 Query: 365 NVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYTGVARR 424 N+DFYSGITLKA+GFP +MFTVLFA+ARTVGWI+QW+EMIEDP+Q+IGRPRQLY G R Sbjct: 362 NIDFYSGITLKALGFPTTMFTVLFALARTVGWIAQWNEMIEDPEQRIGRPRQLYVGAPLR 421 Query: 425 DYVQIDKR 432 DYV I KR Sbjct: 422 DYVPISKR 429 >BMEI0836 [C] COG0372 Citrate synthase Bme Brucella melitensis Length = 437 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/429 (77%), Positives = 373/429 (86%) Query: 5 SSKTATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSKITYID 64 S KTA+ T+ K +D P+ GTVGPDV+DIG LY + FTYDPGFTST SC+SKITYID Sbjct: 9 SDKTASFTLDGKTFDLPVRKGTVGPDVVDIGPLYKNSHAFTYDPGFTSTASCESKITYID 68 Query: 65 GDAGVLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHEQMARF 124 GD GVL YRGYPI+QLAEHGDFLETCYLLLYG+LPT QK DFDYRV HTM+HEQM +F Sbjct: 69 GDEGVLLYRGYPIDQLAEHGDFLETCYLLLYGELPTATQKADFDYRVTRHTMLHEQMTKF 128 Query: 125 FQGFRRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMAYKYTI 184 F GFRRDAHPMA+MV +GA++AFYHDSTDI DP QRM+AS+R+IAKVPTLAAMAYKY I Sbjct: 129 FTGFRRDAHPMAVMVGCLGAMSAFYHDSTDITDPHQRMVASIRLIAKVPTLAAMAYKYHI 188 Query: 185 GQPFVYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNASTSTVRI 244 GQPFVYPKN L FA NFL+MCF VPCEEYK+NPVLA A+D+IFILHADHEQNASTSTVR+ Sbjct: 189 GQPFVYPKNDLDFASNFLHMCFTVPCEEYKVNPVLARAMDRIFILHADHEQNASTSTVRL 248 Query: 245 AGSSGANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKNSEVRL 304 AGSSGANPFACIAAG+ACLWGPAHGGANEAALNML +IG V+ IP++IA+ KDKN RL Sbjct: 249 AGSSGANPFACIAAGVACLWGPAHGGANEAALNMLSEIGSVDRIPEYIARAKDKNDPFRL 308 Query: 305 MGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFIDRKLYP 364 MGFGHRVYKNYDPRAKIMQK CH VL E G DDP+L VAMELE+IAL+D YFI++KLYP Sbjct: 309 MGFGHRVYKNYDPRAKIMQKTCHEVLGELGIKDDPLLDVAMELERIALTDEYFIEKKLYP 368 Query: 365 NVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYTGVARR 424 N+DFYSGITLKA+GFP MFTVLFA+ARTVGW++QW EMIEDPQQKIGRPRQLYTG R Sbjct: 369 NIDFYSGITLKALGFPTEMFTVLFALARTVGWVAQWKEMIEDPQQKIGRPRQLYTGATER 428 Query: 425 DYVQIDKRK 433 DYV + KRK Sbjct: 429 DYVPLAKRK 437 >mlr0629 [C] COG0372 Citrate synthase Mlo Mesorhizobium loti Length = 433 Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/430 (78%), Positives = 375/430 (87%) Query: 3 AKSSKTATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSKITY 62 A TATL K ++F + SG+VGPDVIDI LY G FTYDPGFTST SC+S+IT+ Sbjct: 4 ANQEATATLQFAGKTHEFKVRSGSVGPDVIDIASLYSTTGAFTYDPGFTSTASCESEITF 63 Query: 63 IDGDAGVLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHEQMA 122 IDGDAG+L +RGYPI+QLAEHGDFLE CYLLLYG+LPT AQK DFDYRV HTMVHEQM+ Sbjct: 64 IDGDAGILLHRGYPIDQLAEHGDFLEVCYLLLYGELPTKAQKDDFDYRVTRHTMVHEQMS 123 Query: 123 RFFQGFRRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMAYKY 182 RFF GFRRDAHPMA+M VGAL+AFYHDSTDI+DP QRM+ASMR+IAK+PT+AAMAYKY Sbjct: 124 RFFTGFRRDAHPMAVMCGVVGALSAFYHDSTDISDPYQRMVASMRLIAKMPTIAAMAYKY 183 Query: 183 TIGQPFVYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNASTSTV 242 IGQPF+YPKN L FA NFL+MCFAVPCEEYKINPVLA A+++IFILHADHEQNASTSTV Sbjct: 184 HIGQPFIYPKNDLGFAANFLHMCFAVPCEEYKINPVLARAMERIFILHADHEQNASTSTV 243 Query: 243 RIAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKNSEV 302 R+AGSSGANPFACIAAGIACLWGPAHGGANEAALNML +IG V++IP+FIA+ KDKN Sbjct: 244 RLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLGEIGHVDHIPEFIARAKDKNDPF 303 Query: 303 RLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFIDRKL 362 RLMGFGHRVYKNYDPRAKIMQK H VL E G DDP+L +AMELEKIAL+DPYFI++KL Sbjct: 304 RLMGFGHRVYKNYDPRAKIMQKTAHEVLGELGIKDDPLLDIAMELEKIALTDPYFIEKKL 363 Query: 363 YPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYTGVA 422 YPNVDFYSGITLKA+GFP +MFTVLFAVARTVGWI+QW EMIEDP+QKIGRPRQLYTG Sbjct: 364 YPNVDFYSGITLKALGFPTTMFTVLFAVARTVGWIAQWKEMIEDPRQKIGRPRQLYTGAP 423 Query: 423 RRDYVQIDKR 432 RDYV I KR Sbjct: 424 ERDYVPIAKR 433 >AGc2572 [C] COG0372 Citrate synthase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 429 Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/428 (76%), Positives = 378/428 (88%) Query: 5 SSKTATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSKITYID 64 + K+AT+T+G K + P+ GT+GP V+DI LY G FTYDPGFTST SC+SKITYID Sbjct: 2 TEKSATVTLGEKQVELPVREGTIGPSVVDIATLYKHTGSFTYDPGFTSTASCESKITYID 61 Query: 65 GDAGVLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHEQMARF 124 GD GVL +RG+PIEQLAE GDFLETCYLLLYG+LPT AQKKDFD RV HTMVHEQM+RF Sbjct: 62 GDEGVLLHRGFPIEQLAEQGDFLETCYLLLYGELPTAAQKKDFDTRVTRHTMVHEQMSRF 121 Query: 125 FQGFRRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMAYKYTI 184 F G+RRDAHPMA+M VGAL+AFYHDSTDI DP QRM+AS+RMIAK+PT+AAMAYKY I Sbjct: 122 FTGYRRDAHPMAVMCGTVGALSAFYHDSTDITDPHQRMVASLRMIAKMPTIAAMAYKYHI 181 Query: 185 GQPFVYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNASTSTVRI 244 GQPFVYPKN L +A NFL+MCFAVPCE+YK++PVLA A+D+IFILHADHEQNASTSTVR+ Sbjct: 182 GQPFVYPKNDLDYASNFLHMCFAVPCEDYKVDPVLARAMDRIFILHADHEQNASTSTVRL 241 Query: 245 AGSSGANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKNSEVRL 304 AGSSGANPFACIAAGIACLWGPAHGGANEAALNML +IG V+ IP++IA+ KDKN RL Sbjct: 242 AGSSGANPFACIAAGIACLWGPAHGGANEAALNMLNEIGSVDRIPEYIARAKDKNDPFRL 301 Query: 305 MGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFIDRKLYP 364 MGFGHRVYKNYDPRAKIMQK + VL+ TG+ DDP+++VA+ELEKIALSDPYF+++KLYP Sbjct: 302 MGFGHRVYKNYDPRAKIMQKTMYEVLEATGNSDDPIMQVALELEKIALSDPYFVEKKLYP 361 Query: 365 NVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYTGVARR 424 NVDFYSGITLKA+GFP +MFTVLFA+ARTVGWI+QW+EMIEDPQQ+IGRPRQLYTG +R Sbjct: 362 NVDFYSGITLKALGFPTTMFTVLFALARTVGWIAQWNEMIEDPQQRIGRPRQLYTGAGKR 421 Query: 425 DYVQIDKR 432 DYV + KR Sbjct: 422 DYVPVSKR 429 >CC1906 [C] COG0372 Citrate synthase Ccr Caulobacter vibrioides Length = 426 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 295/424 (69%), Positives = 359/424 (84%), Gaps = 2/424 (0%) Query: 9 ATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSKITYIDGDAG 68 ATLTIG+K+Y+ PIL G+ GPDVID+ K+YG++ FT+DPGFTST SC+SKITYIDGDAG Sbjct: 5 ATLTIGDKSYELPILKGSTGPDVIDVRKIYGESDHFTFDPGFTSTASCESKITYIDGDAG 64 Query: 69 VLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHEQMARFFQGF 128 +L +RGYPI+QLAE FLE CYLLL G+LP + F++ + +HTM+H Q RFF+GF Sbjct: 65 ILLHRGYPIDQLAEKSSFLEVCYLLLNGELPKADEFAKFEHNITYHTMLHAQFDRFFEGF 124 Query: 129 RRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMAYKYTIGQPF 188 RRDAHPMA+M AVGAL+AFY DS +++D R+R I++ R+IAK+PT+AA AYKYT+GQPF Sbjct: 125 RRDAHPMAVMTGAVGALSAFYSDSINVDDAREREISAHRLIAKMPTIAARAYKYTVGQPF 184 Query: 189 VYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNASTSTVRIAGSS 248 V P+N LS++ENFL MCFAVP E++K NPVL A+D+IFILHADHEQNASTSTVR+AGSS Sbjct: 185 VSPRNDLSYSENFLRMCFAVPAEDWKPNPVLTRAMDRIFILHADHEQNASTSTVRLAGSS 244 Query: 249 GANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKNSEVRLMGFG 308 GA+PFACIAAGIACLWGP+HGGAN+ AL ML IG V+NI D++ VKD+ + +LMGFG Sbjct: 245 GAHPFACIAAGIACLWGPSHGGANQEALEMLETIGSVDNIKDYVQGVKDR--KYKLMGFG 302 Query: 309 HRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFIDRKLYPNVDF 368 HRVYKN+DPRAK+MQK H VL E GH +DP+L+VA ELEK+AL+DPYF+DRKLYPN+DF Sbjct: 303 HRVYKNFDPRAKVMQKTAHEVLAELGHNNDPLLQVAQELEKVALNDPYFVDRKLYPNIDF 362 Query: 369 YSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYTGVARRDYVQ 428 YSGITL+AMGFP +MFTVLFA+ARTVGWISQW EM EDP +KIGRPRQLYTG RDYV Sbjct: 363 YSGITLRAMGFPTNMFTVLFALARTVGWISQWKEMFEDPTRKIGRPRQLYTGATHRDYVT 422 Query: 429 IDKR 432 +DKR Sbjct: 423 LDKR 426