BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0095.0015.p         (121 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2666 [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Pae Pseu...    87   7e-18
VC1299 [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Vch Vibr...    87   8e-18
XF0193 [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Xfa Xyle...    87   1e-17
mll8751 [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Mlo Mes...    84   1e-16
ygcM [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Eco Escher...    82   3e-16

>PA2666 [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Pae Pseudomonas
           aeruginosa
          Length = 118

 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 2/117 (1%)

Query: 3   ELTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAMAE 62
           EL K F FE+AH L     G     +HGHSFR  + + G  DP TG + D   ++     
Sbjct: 2   ELFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKP 61

Query: 63  VQKTLDHKFLNKIEAIGVPTLENLSRFIWERLQH-AGRLTRVSVHRDSCNESCTYFG 118
           + + LDH +LN I  +  PT ENL R+IW++L+     L++V VH ++C   C Y G
Sbjct: 62  IYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSKVRVH-ETCTSGCEYRG 117


>VC1299 [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Vch Vibrio
           cholerae
          Length = 122

 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 2/117 (1%)

Query: 3   ELTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAMAE 62
           EL K F FEAAH L     G     +HGHSF   + V G  DP TG V+D   ++ A   
Sbjct: 6   ELYKEFMFEAAHHLPHVPAGHKCGRLHGHSFLVRLYVEGEVDPHTGWVVDFAEIKAAFKP 65

Query: 63  VQKTLDHKFLNKIEAIGVPTLENLSRFIWERLQHA-GRLTRVSVHRDSCNESCTYFG 118
           +   LDH +LN IE +  PT E L+++IW++L+ +   L++V + +++C   C Y G
Sbjct: 66  IYDRLDHYYLNDIEGLENPTSEVLAKWIWQQLKPSLPLLSKVEI-KETCTAGCIYRG 121


>XF0193 [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Xfa Xylella
           fastidiosa 9a5c
          Length = 123

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 65/117 (55%), Gaps = 2/117 (1%)

Query: 3   ELTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAMAE 62
           ++ K F  EAAH L     G     +HGHSFR EV V G  +  TG ++D   L+RA   
Sbjct: 7   DIFKVFIIEAAHRLPHVPPGHKCARLHGHSFRIEVHVSGALESDTGWIMDFSDLKRAFQP 66

Query: 63  VQKTLDHKFLNKIEAIGVPTLENLSRFIWERLQHA-GRLTRVSVHRDSCNESCTYFG 118
           +   LDH +LN+IE +  PT E L+ ++W+RL+     LT + VH ++C   C Y G
Sbjct: 67  IYDQLDHHYLNEIEGLENPTSERLAMWVWDRLKPVLPALTEIVVH-ETCTSGCRYRG 122


>mll8751 [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Mlo Mesorhizobium
           loti
          Length = 117

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 1/105 (0%)

Query: 3   ELTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAMAE 62
           ++T+AF FEAAH L           IHGHS+R E+ + G  DP TG VID   +E     
Sbjct: 2   KITQAFTFEAAHCLPRVPATHRCHRIHGHSYRVELRLEGPVDPDTGFVIDFFDVEAVFGP 61

Query: 63  VQKTLDHKFLNKIEAIGVPTLENLSRFIWERLQH-AGRLTRVSVH 106
           + + LDH++LN+IE +  PT EN++ +IW + +   G++  V+V+
Sbjct: 62  LLQRLDHQYLNEIEGLDNPTAENIAVWIWNQTKPLLGQMCSVTVY 106


>ygcM [H] COG0720 6-pyruvoyl-tetrahydropterin synthase Eco Escherichia
           coli K12
          Length = 121

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 60/115 (52%)

Query: 4   LTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAMAEV 63
           L K F FEAAH L     G     +HGHSF   + + G  DP TG +ID   L+ A    
Sbjct: 6   LFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPT 65

Query: 64  QKTLDHKFLNKIEAIGVPTLENLSRFIWERLQHAGRLTRVSVHRDSCNESCTYFG 118
            + LDH +LN I  +  PT E L+++IW++++    L    + +++C   C Y G
Sbjct: 66  YERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRG 120