BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0095.0003.p         (186 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

lin0961 [S] COG1704 Uncharacterized conserved protein Lin Lister...   177   1e-44
TM0961 [S] COG1704 Uncharacterized conserved protein Tma Thermot...   169   3e-42
SP1284 [S] COG1704 Uncharacterized conserved protein Spn Strepto...   168   7e-42
MA2664 [S] COG1704 Uncharacterized conserved protein Mac Methano...   165   6e-41
FN1125 [S] COG1704 Uncharacterized conserved protein Fnu Fusobac...   161   7e-40

>lin0961 [S] COG1704 Uncharacterized conserved protein Lin Listeria innocua
          Length = 185

 Score =  177 bits (449), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/189 (50%), Positives = 119/189 (62%), Gaps = 14/189 (7%)

Query: 5   WIV-IGVIVLLVLFAFGAYNRLVALSQRVGQAFADIDVQLKQRHDLIPNLVETVKGYAAH 63
           WI+ I V+V+LVL  FG YN LV    RV + +A IDVQLK+R DLIPNLVETVKGYA H
Sbjct: 4   WIIAIAVVVILVLIYFGLYNSLVKYRNRVDETWAQIDVQLKRRFDLIPNLVETVKGYATH 63

Query: 64  ERGTLDDVIKARNSAMSA-----QGPAQVSAAENQLSGALGRLIALSEAYPDLKANANFQ 118
           E+ TL  VI+ARN  M       QG  +   A+N LSGAL  + AL EAYPDLKAN +F 
Sbjct: 64  EKETLTQVIEARNKMMEVPADNRQGQIE---ADNMLSGALKSIFALGEAYPDLKANTSFI 120

Query: 119 QLASELSDLENKIAASRRFFNNAVQEYNTGIQQMPAALFAGMFGFTRKDFFDLGASRTEV 178
           +L  EL+  ENK+A SR+ +N  V  YNT +Q +P  + A +  F  +D   +     EV
Sbjct: 121 ELQHELTTTENKVAYSRQLYNTTVMTYNTKVQSVPTNIVAKLHNFKERDMLSIP----EV 176

Query: 179 E-AAPSVKF 186
           E  AP V+F
Sbjct: 177 ERVAPKVEF 185


>TM0961 [S] COG1704 Uncharacterized conserved protein Tma Thermotoga
           maritima
          Length = 193

 Score =  169 bits (429), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 83/167 (49%), Positives = 116/167 (69%), Gaps = 3/167 (1%)

Query: 20  GAYNRLVALSQRVGQAFADIDVQLKQRHDLIPNLVETVKGYAAHERGTLDDVIKARNSAM 79
           G YN LV+L Q V + ++ I  QL++R DLIPNLVETVKGYAAHE+  L+++  AR   +
Sbjct: 30  GYYNYLVSLEQEVQEKYSQIQNQLQRRADLIPNLVETVKGYAAHEKEILEEIANARAKLI 89

Query: 80  SAQGPAQVSAAENQLSGALGRLIALSEAYPDLKANANFQQLASELSDLENKIAASRRFFN 139
            A+ P + + A+ +LS AL RL+A++E YP+LKA+ANF+QL  EL+  EN+IA +RR +N
Sbjct: 90  GAKTPQESAQADAELSSALSRLLAIAENYPNLKADANFRQLMDELAGTENRIAVARRDYN 149

Query: 140 NAVQEYNTGIQQMPAALFAGMFGFTRKDFFDLGASRTEVEAAPSVKF 186
            AV++YNT I++ P  +FA MFGF  K +F+      EV   P VKF
Sbjct: 150 EAVKKYNTAIKKFPGVIFAKMFGFEEKQYFEAKPGAEEV---PEVKF 193


>SP1284 [S] COG1704 Uncharacterized conserved protein Spn Streptococcus
           pneumoniae TIGR4
          Length = 186

 Score =  168 bits (425), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 121/183 (66%), Gaps = 3/183 (1%)

Query: 4   SWIVIGVIVLLVLFAFGAYNRLVALSQRVGQAFADIDVQLKQRHDLIPNLVETVKGYAAH 63
           +WI++GVI L+V+F   +YN LV    +  +A++ IDVQLK+R+DL+PNL+ETVKGYA +
Sbjct: 2   TWIILGVIALIVIFVIVSYNGLVKNRMQTKEAWSQIDVQLKRRNDLLPNLIETVKGYAKY 61

Query: 64  ERGTLDDVIKARNSAMSAQGPAQVSAAENQLSGALGRLIALSEAYPDLKANANFQQLASE 123
           E  TL+ V + RN   +A  PA+   A + L+  +  + A++E+YPDLKA+ANF +L  E
Sbjct: 62  EGSTLEKVAELRNQVAAATSPAEAMKASDALTRQVSGIFAVAESYPDLKASANFVKLQEE 121

Query: 124 LSDLENKIAASRRFFNNAVQEYNTGIQQMPAALFAGMFGFTRKDFFDLGASRTEVEAAPS 183
           L++ ENKI+ SR+ +N+ V  YN  ++  P+ + AGMFGF   DF     +  E ++ P 
Sbjct: 122 LTNTENKISYSRQLYNSVVSNYNVKLETFPSNIIAGMFGFKAADFLQ---TPEEEKSVPK 178

Query: 184 VKF 186
           V F
Sbjct: 179 VDF 181


>MA2664 [S] COG1704 Uncharacterized conserved protein Mac Methanosarcina
           acetivorans str.C2A
          Length = 182

 Score =  165 bits (417), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 108/165 (65%), Gaps = 3/165 (1%)

Query: 22  YNRLVALSQRVGQAFADIDVQLKQRHDLIPNLVETVKGYAAHERGTLDDVIKARNSAMSA 81
           YN L+    RV  A+A ++VQLK+R+DLIPNLVETVKGYA HE+   +++ KAR + MSA
Sbjct: 21  YNDLIKQRNRVENAWAQVEVQLKRRYDLIPNLVETVKGYATHEKTLFENITKARAAVMSA 80

Query: 82  QGPAQVSAAENQLSGALGRLIALSEAYPDLKANANFQQLASELSDLENKIAASRRFFNNA 141
               + + A N LS  L  L A++E YPDLKAN NF QL  +L + ENKIA SR+F+N+ 
Sbjct: 81  SSVNETAEASNYLSSTLKSLFAVAENYPDLKANQNFMQLQKDLMETENKIAYSRQFYNDT 140

Query: 142 VQEYNTGIQQMPAALFAGMFGFTRKDFFDLGASRTEVEAAPSVKF 186
           V +YN  IQ +P  + A + GF +K+ F+   +  EV   P V+F
Sbjct: 141 VMKYNISIQTIPKNIVASLLGFQKKELFETAQAEREV---PKVEF 182


>FN1125 [S] COG1704 Uncharacterized conserved protein Fnu Fusobacterium
           nucleatum
          Length = 183

 Score =  161 bits (408), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 81/170 (47%), Positives = 110/170 (64%), Gaps = 5/170 (2%)

Query: 18  AFGAYNRLVALSQRVGQAFADIDVQLKQRHDLIPNLVETVKGYAAHERGTLDDVIKARNS 77
           A G  N+ V L  RV  +++ IDVQ++ R  L+PNLVETVKGYA HE+ T + +  A+  
Sbjct: 18  AIGYKNKFVVLDNRVKNSWSQIDVQMQNRFSLVPNLVETVKGYAKHEKETFEGIANAKTR 77

Query: 78  AMSAQGPAQVSAAENQLSGALGRLIALSEAYPDLKANANFQQLASELSDLENKIAASRRF 137
            MSA  P +   A NQLSG LGRL A+SEAYP+LKAN +F+ L ++L ++ENKI  +R+F
Sbjct: 78  YMSATTPEEKMEANNQLSGFLGRLFAISEAYPELKANTSFENLQAQLVEVENKIRFARQF 137

Query: 138 FNNAVQEYNTGIQQMPAALFAGMFGFTRKDFFDLGA-SRTEVEAAPSVKF 186
           +N+ V EYN  IQ  P +LFAG F +   + F     +R EV+    VKF
Sbjct: 138 YNDTVTEYNQTIQMFPGSLFAGFFNYHNAELFKANEMAREEVQ----VKF 183