BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0022.p (310 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc1159 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and ... 288 8e-78 BMEI1518 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and... 286 3e-77 SMc00988 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and... 284 1e-76 mll7442 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and ... 280 4e-75 CC3421 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and r... 251 2e-66 >AGc1159 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 317 Score = 288 bits (738), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 169/312 (54%), Positives = 215/312 (68%), Gaps = 6/312 (1%) Query: 2 SDVSTRVADS-TGNWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAGVAHDV 60 SD+S RV+D+ + NWV P PY +LAR+DRPIG LL+ PC+W+AALAA A Sbjct: 5 SDLSDRVSDAPSNNWVYRILPRPLWPYAQLARWDRPIGWQLLMWPCFWAAALAANAAVAT 64 Query: 61 R-----SLPLVVLLFFIGAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVTVTQAA 115 +L ++LFFIG+ MRGAGCT+ND+ D +D V RTRSRP+P+G+V+ QA Sbjct: 65 GGFSWGTLIWHLVLFFIGSVAMRGAGCTYNDLADHKIDMAVARTRSRPLPSGRVSRGQAK 124 Query: 116 VFMVLQALIGLLVLLQXNRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAFSYGALMG 175 +F+VLQAL GL+VLLQ N FAV+TGIASL+ VAIYPF KR T WPQ LGLAFS+GALMG Sbjct: 125 LFIVLQALAGLVVLLQFNGFAVITGIASLVFVAIYPFAKRFTNWPQFFLGLAFSWGALMG 184 Query: 176 FAVTLARIDLTAIALYAGSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGARTHRALVI 235 +A + A+ LY GSIAW I YDTIYAHQD EDD +G+ STA LFG THR LV+ Sbjct: 185 WAGQFGSLAWPAVLLYVGSIAWTIGYDTIYAHQDKEDDTAVGIGSTALLFGENTHRWLVV 244 Query: 236 FYGLAVLLIGVAFALAGARWPAWIGLAAFALHLAWQVRRLDISDGALCLRIFKSNRDAGF 295 YG A+++I ++F AG A+ GLAA A+ L QV LDI + CL +FKSN G Sbjct: 245 LYGTALVMIFLSFWTAGVNIIAYSGLAAAAIMLFRQVWVLDIDNVDQCLVLFKSNNRVGV 304 Query: 296 ILFASLVVDAVL 307 ++FA L++ +L Sbjct: 305 LIFAGLILPLLL 316 >BMEI1518 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Bme Brucella melitensis Length = 333 Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 171/314 (54%), Positives = 208/314 (66%), Gaps = 13/314 (4%) Query: 2 SDVSTRVAD------STGNWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAG 55 SD+ +R A +G+WV P W PY +LAR+DRPIG LLL PCWWS AL AG Sbjct: 8 SDIQSRAARGRVKDAPSGHWVYRVLPQWLWPYAQLARWDRPIGWQLLLWPCWWSTALVAG 67 Query: 56 VAHDVRSLPLVVL-------LFFIGAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQ 108 VL LF +GA MRGAGCT+ND+ D+++D KV+RTRSRP+P+GQ Sbjct: 68 AGAKAGDGAWSVLPSFWHLFLFLVGAIAMRGAGCTYNDLVDQEIDDKVDRTRSRPLPSGQ 127 Query: 109 VTVTQAAVFMVLQALIGLLVLLQXNRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAF 168 VT QA +F+VLQAL+GL V+LQ N F+V GI SLLIVA YPFMKRIT WPQ VLGLAF Sbjct: 128 VTRKQAKLFVVLQALVGLAVVLQFNWFSVGLGIFSLLIVAAYPFMKRITDWPQFVLGLAF 187 Query: 169 SYGALMGFAVTLARIDLTAIALYAGSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGAR 228 S+GALMG+A T + L + LY G+I W I YDTIYAHQD EDDAL+GV+STARLFG Sbjct: 188 SWGALMGWAATEGSLSLPPVLLYIGAILWTIGYDTIYAHQDKEDDALVGVRSTARLFGKH 247 Query: 229 THRALVIFYGLAVLLIGVAFALAGARWPAWIGLAAFALHLAWQVRRLDISDGALCLRIFK 288 T AL++ YG A+ AFA+ PA GL A HL Q+ LDI + CLR+FK Sbjct: 248 TKTALMVLYGGAIGFFAAAFAVVQVPMPALAGLLAAGAHLYRQILVLDIDNPDQCLRLFK 307 Query: 289 SNRDAGFILFASLV 302 SN G+++F LV Sbjct: 308 SNNIVGWLIFLGLV 321 >SMc00988 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Sme Sinorhizobium meliloti Length = 318 Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 165/310 (53%), Positives = 207/310 (66%), Gaps = 6/310 (1%) Query: 5 STRVADS-TGNWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAGVAHDVRSL 63 S RV D+ + NWV P PY +LAR+DRPIG LLL+PC WSAA+AAG A + S Sbjct: 7 SGRVHDAPSNNWVYRVLPRALWPYAQLARWDRPIGWQLLLLPCLWSAAMAAGAAASLGSF 66 Query: 64 P-----LVVLLFFIGAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVTVTQAAVFM 118 + LF +GA MRGAGCT+NDI D D+D +V RTRSRP+P+G+VT QA FM Sbjct: 67 SAGRFLFHIFLFTVGAIAMRGAGCTYNDIVDHDIDMEVARTRSRPLPSGRVTRFQAKAFM 126 Query: 119 VLQALIGLLVLLQXNRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAFSYGALMGFAV 178 +LQAL+GL+VLLQ N F + G SL +VAIYPF KR T WPQ LGLAFS+GA+MG+ Sbjct: 127 LLQALVGLVVLLQFNGFTIFLGFLSLALVAIYPFAKRFTDWPQFFLGLAFSWGAIMGWTA 186 Query: 179 TLARIDLTAIALYAGSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGARTHRALVIFYG 238 + L AI+LYA +IAW I YDTIYA+QD EDD LIGV+STAR FG L+ YG Sbjct: 187 EFGSLSLAAISLYAAAIAWTIGYDTIYAYQDREDDELIGVRSTARRFGDNPQPWLIGLYG 246 Query: 239 LAVLLIGVAFALAGARWPAWIGLAAFALHLAWQVRRLDISDGALCLRIFKSNRDAGFILF 298 +AV L+ AF AGA + A++GL A+ LA+Q+ L+I D CL +FK N G I+F Sbjct: 247 IAVFLMLFAFLAAGAGFFAYVGLLVAAVMLAYQIVVLNIHDPLQCLALFKFNGVVGLIIF 306 Query: 299 ASLVVDAVLR 308 A LV+ + R Sbjct: 307 AGLVLSLLAR 316 >mll7442 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Mlo Mesorhizobium loti Length = 327 Score = 280 bits (715), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 169/308 (54%), Positives = 210/308 (68%), Gaps = 8/308 (2%) Query: 7 RVADS-TGNWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAAL-------AAGVAH 58 RVAD+ G+WV P PY +LAR+DRPIG LLL PCWWSAAL Sbjct: 12 RVADAPNGHWVYRVLPRSVWPYAQLARWDRPIGWQLLLWPCWWSAALAASAYPRPGDPLL 71 Query: 59 DVRSLPLVVLLFFIGAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVTVTQAAVFM 118 + PL ++LF +GA MRGAGCT+NDI D ++D +V+RTRSRP+P+GQ T +A +F+ Sbjct: 72 SLLPAPLYLVLFLVGAIAMRGAGCTYNDIVDENIDNQVDRTRSRPLPSGQTTRRRAWLFL 131 Query: 119 VLQALIGLLVLLQXNRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAFSYGALMGFAV 178 VLQAL+GL VLLQ N FA++ GI SL IVAIYPFMKRIT WPQ+ LGLAFS+GALMG+AV Sbjct: 132 VLQALVGLAVLLQFNSFAILLGICSLAIVAIYPFMKRITNWPQLFLGLAFSWGALMGWAV 191 Query: 179 TLARIDLTAIALYAGSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGARTHRALVIFYG 238 +D AI LY GSI WVI YDTIYAHQD EDDA++GV+STARLFG T L YG Sbjct: 192 EFGDLDGPAIMLYIGSILWVIGYDTIYAHQDKEDDAIVGVRSTARLFGDNTKSWLAGLYG 251 Query: 239 LAVLLIGVAFALAGARWPAWIGLAAFALHLAWQVRRLDISDGALCLRIFKSNRDAGFILF 298 ++ +AFA A A A GL A H+A Q+ LDI+D CLR+F+SN G+++F Sbjct: 252 GTLICFAIAFASAQAPVVALAGLIAAGAHMARQIAVLDINDPDQCLRLFRSNNQVGWLIF 311 Query: 299 ASLVVDAV 306 L+ A+ Sbjct: 312 LGLIGGAL 319 >CC3421 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Ccr Caulobacter vibrioides Length = 328 Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 142/291 (48%), Positives = 188/291 (64%), Gaps = 5/291 (1%) Query: 14 NWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAGVAHDVR-SLPLVVLLFFI 72 NWVD HAP RP+L+L R+DRP+G WLL++P W ALAA A R PL++L F+ Sbjct: 31 NWVDRHAPQRLRPWLKLGRFDRPVGIWLLMLPGWQGIALAA--AEQGRWPNPLLLLAVFV 88 Query: 73 GAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVTVTQAAVFMVLQALIGLLVLLQX 132 GA +MR AGC +NDI DRD DA+V RT RPIPAG ++V QA +F+V + L+L+ Sbjct: 89 GAALMRAAGCAFNDIVDRDFDAQVARTAMRPIPAGLISVKQAWLFVVGCCGVSFLILICL 148 Query: 133 NRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAFSYGALMGFAVTLARIDLTAIALYA 192 A++ G+ SL +VA YPFMKRITWWPQ LGL F++GAL+G+A + +A LYA Sbjct: 149 GWTAILLGVLSLALVAAYPFMKRITWWPQAWLGLTFNWGALLGYAAATGHLSWSAALLYA 208 Query: 193 GSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGARTHRALVIFYGLAVLLIGVAFALAG 252 I W + YDTIYA QD EDDAL G+KS+ R G + FY ++ +L+ +A G Sbjct: 209 SGIFWTLGYDTIYAIQDIEDDALAGIKSSTRRLGQHVQIGVAGFYLVSFILLVIA-GWMG 267 Query: 253 ARWPAWIGLAA-FALHLAWQVRRLDISDGALCLRIFKSNRDAGFILFASLV 302 P ++ LAA FALHL+ Q + I DG L++FKSN AG ++FA LV Sbjct: 268 DIGPLFLPLAALFALHLSRQAAAVRIEDGPGALKLFKSNALAGLLVFAGLV 318