BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0020.p (258 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc00897 [R] COG0312 Predicted Zn-dependent proteases and their ... 287 1e-77 mlr8264 [R] COG0312 Predicted Zn-dependent proteases and their i... 284 1e-76 AGc1248 [R] COG0312 Predicted Zn-dependent proteases and their i... 283 4e-76 BMEII1033 [R] COG0312 Predicted Zn-dependent proteases and their... 271 9e-73 CC0309 Non COG 255 5e-68 >SMc00897 [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs Sme Sinorhizobium meliloti Length = 448 Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 148/260 (56%), Positives = 185/260 (71%), Gaps = 6/260 (2%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVETCK-VPVVFDPRVAGSIVGH 59 MERDYDF S + +L + +GR AGERA AR NPR+V T K V VVFDPRVA GH Sbjct: 191 MERDYDFDSRLYFDELRTAEDIGRVAGERAAARVNPRRVATQKNVTVVFDPRVARGFAGH 250 Query: 60 LVGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALI 119 L GAINGAS+ARKTSFL+D +G+Q+ I + DDPL VRG S+ FD EGV K +++ Sbjct: 251 LAGAINGASVARKTSFLRDMMGKQIMKSGIAVTDDPLIVRGASSRPFDGEGVSGSKLSMV 310 Query: 120 DAGVLTTWVLDSATARELGLVTTGHAHRGVSSSP--SPGTYNLHLEPGAVTPRELISDIK 177 + GVL W L ++ ARELGL T G RGV P SP + NL LEPG+++ +LI + Sbjct: 311 EDGVLRHWFLSTSAARELGLETNG---RGVRGGPAVSPASTNLALEPGSISRDDLIRGVG 367 Query: 178 QGFYVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDL 237 GFYVT+LIG GVN VTG+YSRGASGFWIENGEI YPVSEVTIA +L MF +L ADD+ Sbjct: 368 TGFYVTELIGQGVNMVTGEYSRGASGFWIENGEILYPVSEVTIASNLKQMFMALTPADDI 427 Query: 238 EFRYGVNSPTLRIEGLTLGG 257 + ++G+ +PTL +EG+T+ G Sbjct: 428 DRKFGIAAPTLAVEGMTIAG 447 >mlr8264 [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs Mlo Mesorhizobium loti Length = 463 Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 146/257 (56%), Positives = 184/257 (71%), Gaps = 1/257 (0%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVETCKVPVVFDPRVAGSIVGHL 60 MERDY+F+S H +DLD+P +GRKAGERAV R RK T V VVFDPRVA I GHL Sbjct: 207 MERDYEFSSRQHFADLDAPEDIGRKAGERAVRRIGARKAATGPVDVVFDPRVARGIAGHL 266 Query: 61 VGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALID 120 GAINGAS+ARKTSFL+D +G+Q+ + I + D+PLR RG S+ FD EGV +K +++ Sbjct: 267 AGAINGASVARKTSFLRDMMGKQVAASAITVTDEPLRPRGQASRPFDGEGVEGEKLLMVE 326 Query: 121 AGVLTTWVLDSATARELGLVTTGHAHRGVSSSPSPGTYNLHLEPGAVTPRELISDIKQGF 180 GVL W L ++ ARELGL+T G R SS T NL +EPG +P +LI +K GF Sbjct: 327 KGVLNHWFLSTSAARELGLITNGRGSRSGSSVSPSST-NLAIEPGERSPEDLIKSLKSGF 385 Query: 181 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDLEFR 240 YVT++ G GV+ VTG+YSRGASGFWIENGE+ YPV+EVTIA +L MF ++V ADDL+ Sbjct: 386 YVTEVFGQGVDMVTGEYSRGASGFWIENGELAYPVAEVTIASNLKTMFLNMVPADDLDRN 445 Query: 241 YGVNSPTLRIEGLTLGG 257 +G +PTL IEG+TL G Sbjct: 446 FGTAAPTLLIEGMTLAG 462 >AGc1248 [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 453 Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 140/259 (54%), Positives = 186/259 (71%), Gaps = 2/259 (0%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVET-CKVPVVFDPRVAGSIVGH 59 MERDYD+ S + +DLD+ +GR+AGE+ V R PR+V+T + VVFDPR+A VG Sbjct: 196 MERDYDYDSRLYYADLDTAEEIGRRAGEKVVRRVGPRQVDTGSNITVVFDPRIARGFVGA 255 Query: 60 LVGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALI 119 + GAINGAS+ARKTSFL+DK+G+Q+ K + + DDP VRG S+ FD EG+R +K +I Sbjct: 256 IAGAINGASVARKTSFLRDKMGQQILKKGLYLTDDPQIVRGPSSRPFDGEGIRGEKMTMI 315 Query: 120 DAGVLTTWVLDSATARELGLVTTGHAHRGVSSSPSPGTYNLHLEPGAVTPRELISDIKQG 179 + GVL W L ++ ARELGL T G RG +S SP + NL LEPG ++P EL+ I G Sbjct: 316 EDGVLKHWFLSTSAARELGLETNGRGVRG-GTSVSPASTNLALEPGDLSPEELLVQIGTG 374 Query: 180 FYVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDLEF 239 FYVT+LIG G N +TG+YS GASGFWIENGE ++PVSEVTIA +L MF + A+D++ Sbjct: 375 FYVTELIGHGANMLTGEYSCGASGFWIENGEKSFPVSEVTIASNLKDMFMRVTPANDIDR 434 Query: 240 RYGVNSPTLRIEGLTLGGR 258 +YGV +PTL IEG+T+ G+ Sbjct: 435 KYGVAAPTLAIEGMTIAGK 453 >BMEII1033 [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs Bme Brucella melitensis Length = 430 Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 135/259 (52%), Positives = 180/259 (69%), Gaps = 5/259 (1%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVETCKVPVVFDPRVAGSIVGHL 60 MERDYDF+S H +DLD+P A+GR AGERAV R R+ +T V VV+DPR+A I GHL Sbjct: 174 MERDYDFSSRLHFADLDAPEAIGRSAGERAVRRLGARQAKTGPVTVVYDPRLARGIAGHL 233 Query: 61 VGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALID 120 AINGAS+ARK SFL++ LG+ + + I + D+PLRVRG S+ FD EG+ + +++ Sbjct: 234 ASAINGASVARKMSFLRNSLGKPVLKQGINVTDNPLRVRGPSSRPFDGEGIEGQPLTMVE 293 Query: 121 AGVLTTWVLDSATARELGLVTTGHAHRGVSSSP--SPGTYNLHLEPGAVTPRELISDIKQ 178 GVL W+L ++ARELGL G RGV S +P + N +EPG +P ELI + Sbjct: 294 DGVLQHWLLSGSSARELGLQGNG---RGVPSGSGVTPASTNFAIEPGTQSPEELIRAVGT 350 Query: 179 GFYVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDLE 238 GFYVT++ G GV+ ++G YSRGASGFWIENGE+ YPVSEVTIA +L MF ++ A D++ Sbjct: 351 GFYVTEVFGQGVDMISGQYSRGASGFWIENGELAYPVSEVTIASNLKDMFLNMTPASDID 410 Query: 239 FRYGVNSPTLRIEGLTLGG 257 +G+ +PTL IEG+TL G Sbjct: 411 RNFGMAAPTLVIEGMTLAG 429 >CC0309 Non COG Length = 443 Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 126/258 (48%), Positives = 177/258 (68%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVETCKVPVVFDPRVAGSIVGHL 60 MER + S H DL + +G +AG +AVAR NPRK+ + PV+F+ R+A S++G L Sbjct: 186 MERGGEGRSTRHFGDLPAAGDIGMEAGRQAVARLNPRKIASTTAPVIFENRLAMSLIGPL 245 Query: 61 VGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALID 120 +GAI+G SIAR TSFLKDKLG+ +F+K + +++DP RVRGL S FD EGV + ALI+ Sbjct: 246 LGAISGPSIARGTSFLKDKLGQAIFAKGVNLLEDPHRVRGLGSAPFDDEGVATQARALIE 305 Query: 121 AGVLTTWVLDSATARELGLVTTGHAHRGVSSSPSPGTYNLHLEPGAVTPRELISDIKQGF 180 GVLTTW+L+++ A++LGL TTGHA RG++ +NL L+PGA + L+ D G Sbjct: 306 DGVLTTWLLNTSAAKQLGLATTGHASRGLAGPSGVSAHNLTLQPGAQDLKGLMQDAGTGL 365 Query: 181 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDLEFR 240 VT + G +NG TGD+S G SG+W ENGE T PV+E+T+AG+L+ ++ LV DLEFR Sbjct: 366 VVTSMFGPSLNGNTGDWSVGCSGYWFENGESTGPVTEITVAGNLIDIYARLVPGSDLEFR 425 Query: 241 YGVNSPTLRIEGLTLGGR 258 NSP+L ++ L + G+ Sbjct: 426 GASNSPSLLVDALAIAGK 443