BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0016.p (495 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII1029 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transfera... 310 5e-84 mlr8269 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase... 309 8e-84 SMc00894 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferas... 304 3e-82 AGc1254 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase... 292 1e-78 CC0302 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase ... 268 2e-71 >BMEII1029 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase Bme Brucella melitensis Length = 446 Score = 310 bits (794), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 164/368 (44%), Positives = 217/368 (58%) Query: 2 YRKLSSAMVPLAPALIKRRLKLGKEDPERVGERRGVSADTRPQGPLVWIHGASVGEVLAA 61 YR L SA P + I R GKED R GER G SA RPQGP++W H ASVGE +A Sbjct: 13 YRFLGSAAYPFVGSYIAYRASRGKEDRSRRGERYGKSAIARPQGPVIWAHAASVGETIAL 72 Query: 62 AGLIERLRALNLRILLTSGTVTSAAIVAKRFPPDVIHQYVPYDSPRYVTRFLDHWHPSLA 121 L+ER+ A + +++T+GTVTSA +VA + VIHQY P D V FLDHW P L Sbjct: 73 VPLVERIVATGIHVVMTTGTVTSAKVVADQLGSRVIHQYAPLDLQPAVDHFLDHWKPDLV 132 Query: 122 LFIESDLWPNLILSSAARRLPMVLINGRMSQRSFPRWRRVSNTIGALLGRFDICLAQSNT 181 + ES++WP +LS +R +P VL+NGRMS RSF W++ AL F +AQS Sbjct: 133 IGCESEVWPATVLSLGSRHIPHVLVNGRMSDRSFAAWQKRPALAEALFENFAHVVAQSEL 192 Query: 182 DAERFAALGSHNVVVTGNLKLDVAAPPADPAKLERLMSVTRGRAIVVAASTHPGEEEILI 241 D ERF ALG+ V V+GNLK+D PP+DP + + GR A STH GEEEI Sbjct: 193 DGERFRALGARPVSVSGNLKVDTPPPPSDPQAMSLMQRQVAGRRTWAAISTHDGEEEIAA 252 Query: 242 EAHKSLAGFFPGLLTVIVPRHAARGEAVARLVTEAGLRPGLRSHEDLPVATTDIYVADTM 301 E H+ L +P L+T+IVPRH R A+ ++ GL+ RS A TD+ + DT+ Sbjct: 253 EVHQMLKMRYPRLITIIVPRHPDRAPAIEAMLAAKGLKVARRSTGQPIEADTDVLLGDTI 312 Query: 302 GELGLFYRLAPIVFMGGSLVAHGGQNPIEAIKLGAAIVHGPHVFNFTDVYEALDRAGGAR 361 GE+GL+ +L I F+G SL GG NP+E + A++ G +V NF + ++ L + GGAR Sbjct: 313 GEMGLYLQLTEIAFIGNSLTKEGGHNPLEPAMMATAVLTGRNVQNFRESFQRLIKNGGAR 372 Query: 362 RADDREAL 369 DR L Sbjct: 373 IVKDRNML 380 >mlr8269 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase Mlo Mesorhizobium loti Length = 438 Score = 309 bits (792), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 167/382 (43%), Positives = 222/382 (58%) Query: 2 YRKLSSAMVPLAPALIKRRLKLGKEDPERVGERRGVSADTRPQGPLVWIHGASVGEVLAA 61 YR +A PL + R GKED R ER GV+ RP+GP++WIH ASVGE +A Sbjct: 13 YRFAGAAAYPLVGPYVAWRTSRGKEDRHRRRERYGVAGRPRPEGPVIWIHAASVGETIAV 72 Query: 62 AGLIERLRALNLRILLTSGTVTSAAIVAKRFPPDVIHQYVPYDSPRYVTRFLDHWHPSLA 121 L+E + + I+LT+GTVTSA + +R +IHQYVP D V+RFLDHW P LA Sbjct: 73 VPLVESILDYGVNIVLTTGTVTSAQVADERLGDRIIHQYVPLDLKPAVSRFLDHWQPDLA 132 Query: 122 LFIESDLWPNLILSSAARRLPMVLINGRMSQRSFPRWRRVSNTIGALLGRFDICLAQSNT 181 + ES++WP IL AR +P VL+NGR+S RSF W++ +N AL +AQS+ Sbjct: 133 IIAESEIWPMTILELGARHVPQVLVNGRLSDRSFTSWKKRANIAEALFENLAHVVAQSDV 192 Query: 182 DAERFAALGSHNVVVTGNLKLDVAAPPADPAKLERLMSVTRGRAIVVAASTHPGEEEILI 241 D ERF LG+ V V+GNLK+D PP D L L GR A STH GEE + Sbjct: 193 DGERFRTLGARPVTVSGNLKVDTNPPPVDERVLASLQRQIGGRPTWAAISTHDGEEVVAA 252 Query: 242 EAHKSLAGFFPGLLTVIVPRHAARGEAVARLVTEAGLRPGLRSHEDLPVATTDIYVADTM 301 E H +L GLLT++VPRH R EA+A ++ GL+ RS D TDI + DT+ Sbjct: 253 EVHATLHKRHHGLLTIVVPRHPDRAEALAAQISGMGLKVARRSKGDRIGPDTDILLGDTI 312 Query: 302 GELGLFYRLAPIVFMGGSLVAHGGQNPIEAIKLGAAIVHGPHVFNFTDVYEALDRAGGAR 361 GE+GL+ RL I F+G SL + GGQNP+E L A++ G +V NF + Y+ L +GGA+ Sbjct: 313 GEMGLYLRLTEIAFVGRSLTSEGGQNPLEPAMLDTAVLAGRNVQNFREAYQRLIDSGGAK 372 Query: 362 RADDREALVKQLGQFLADSXLR 383 DR+ L + L + R Sbjct: 373 LVRDRDMLAGAVNFLLTNEVAR 394 >SMc00894 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase Sme Sinorhizobium meliloti Length = 437 Score = 304 bits (779), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 164/382 (42%), Positives = 222/382 (58%), Gaps = 1/382 (0%) Query: 2 YRKLSSAMVPLAPALIKRRLKLGKEDPERVGERRGVSADTRPQGPLVWIHGASVGEVLAA 61 YR L +A+ P + + R GKEDP R ER G ++ RPQGPLVW H ASVGE A Sbjct: 13 YRWLGTAVYPFFWSYLALRAAKGKEDPARRRERYGYASAPRPQGPLVWFHAASVGETNAV 72 Query: 62 AGLIERLRALNLRILLTSGTVTSAAIVAKRFPPDVIHQYVPYDSPRYVTRFLDHWHPSLA 121 LI+ +R + ++LT+GT TSA + A+R V+HQYVP D V+RFL++W P LA Sbjct: 73 TPLIKEIRRRGIAVVLTTGTTTSARVAAERLGSAVVHQYVPLDFKPAVSRFLEYWQPDLA 132 Query: 122 LFIESDLWPNLILSSAARRLPMVLINGRMSQRSFPRWRRVSNTIGALLGRFDICLAQSNT 181 + ES++WP I+ R +P VL+NGR+S R+F RWRR + AL + +AQS+ Sbjct: 133 IIAESEIWPMTIIELGRRHIPQVLVNGRLSDRTFARWRRRPSLADALFENLALVIAQSDV 192 Query: 182 DAERFAALGSHNVVVTGNLKLDVAAPPADPAKLERLMSVTRGRAIVVAASTHPGEEEILI 241 DAERF LG+ V V+GNLK+D APP DP L R A ST GEE Sbjct: 193 DAERFRTLGALPVTVSGNLKVDNEAPPHDPRDLREYRQQIGARKTWAAISTFEGEENAAG 252 Query: 242 EAHKSLAGFFPGLLTVIVPRHAARGEAVARLVTEAGLRPGLRSHEDLPVATTDIYVADTM 301 H++L GLLT+IVPRH R +A+ + GL+ R+ D DI + DT+ Sbjct: 253 TVHQALKE-RTGLLTIIVPRHPERCDAIEAALVAKGLKVARRTRGDPVTPEVDILLGDTI 311 Query: 302 GELGLFYRLAPIVFMGGSLVAHGGQNPIEAIKLGAAIVHGPHVFNFTDVYEALDRAGGAR 361 GE+GL+ RL + F+G SL A GGQNP+E LG A++ G +V NF + Y+ L + G A+ Sbjct: 312 GEMGLYLRLTEVAFVGRSLFAEGGQNPLEPAMLGCAVLSGGNVQNFRETYQMLAKNGSAK 371 Query: 362 RADDREALVKQLGQFLADSXLR 383 D E L K + LA+ +R Sbjct: 372 FVRDTEMLAKGVNYLLANDDMR 393 >AGc1254 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 440 Score = 292 bits (747), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 162/384 (42%), Positives = 215/384 (55%), Gaps = 1/384 (0%) Query: 2 YRKLSSAMVPLAPALIKRRLKLGKEDPERVGERRGVSADTRPQGPLVWIHGASVGEVLAA 61 YR A P A + R GKED R ER G ++ RP+GPLVW H ASVGE LA Sbjct: 13 YRIAGIAAYPFARPYLSYRAAKGKEDKRRRLERFGYASAERPRGPLVWFHAASVGETLAL 72 Query: 62 AGLIERLRALNLRILLTSGTVTSAAIVAKRFPPDVIHQYVPYDSPRYVTRFLDHWHPSLA 121 LI +R ++ +LLT+GTVTSA + R DVIHQYVP D V RFL +W P A Sbjct: 73 IPLIREIRKRDIFVLLTTGTVTSAELTRTRLGDDVIHQYVPLDIKIAVNRFLTYWAPDAA 132 Query: 122 LFIESDLWPNLILSSAARRLPMVLINGRMSQRSFPRWRRVSNTIGALLGRFDICLAQSNT 181 + ES++WP ++ R +P + +N R+S RSF RW+ + +L + + +AQS+ Sbjct: 133 ITAESEIWPVTMMELERRHIPQIRVNARLSDRSFDRWKARHDIAESLFSKLALVVAQSDL 192 Query: 182 DAERFAALGSHNVVVTGNLKLDVAAPPADPAKLERLMSVTRGRAIVVAASTHPGEEEILI 241 DAERF LGS VV++GNLK D PP D A LE R A ST GEE+ Sbjct: 193 DAERFRDLGSWPVVISGNLKGDTDPPPCDEALLESYRKQVGNRKTWAAISTFDGEEKAAA 252 Query: 242 EAHKSLAGFFPGLLTVIVPRHAARGEAVARLVTEAGLRPGLRSHEDLPVATTDIYVADTM 301 H ++ G LT+IVPRH RG+ V ++ L RS D+ TDI++ D++ Sbjct: 253 TVHAAIKS-RNGQLTIIVPRHPERGDDVEAMLKGMNLSVARRSRNDVITPGTDIFLGDSI 311 Query: 302 GELGLFYRLAPIVFMGGSLVAHGGQNPIEAIKLGAAIVHGPHVFNFTDVYEALDRAGGAR 361 GE+GL+ RL + F+G SL A GGQNP+E LG A++ G HV NF + Y+ L RAGG R Sbjct: 312 GEMGLYLRLTELAFVGRSLTAEGGQNPLEPAMLGCAVLSGAHVQNFREAYQKLIRAGGGR 371 Query: 362 RADDREALVKQLGQFLADSXLRAR 385 D E L K + L + R + Sbjct: 372 IIRDVEMLAKAVHYLLVNDNERYK 395 >CC0302 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase Ccr Caulobacter vibrioides Length = 416 Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 160/370 (43%), Positives = 215/370 (58%), Gaps = 16/370 (4%) Query: 1 VYRKLSSAMVPLAPALIKRRLKLGKEDPERVGERRGVSADTRPQGPLVWIHGASVGEVLA 60 +YR + + P+APAL+ R + GKEDP R+ ER + RP+GPLVW+HGASVGE L+ Sbjct: 9 LYRAATGLLEPVAPALLAHRARKGKEDPARLAERLARADTPRPEGPLVWLHGASVGESLS 68 Query: 61 AAGLIERLRALN--LRILLTSGTVTSAAIVAKRFPPDVIHQYVPYDSPRYVTRFLDHWHP 118 L+ERLRA + +L+TSGT TSAA++AKR PP IHQY P D+P RF+ W P Sbjct: 69 ILPLVERLRAEKPEVTVLVTSGTTTSAALLAKRLPPGAIHQYAPVDAPGAARRFIAQWKP 128 Query: 119 SLALFIESDLWPNLILSSAARRLPMVLINGRMSQRSFPRWRRVSNTIGALLGRFDICLAQ 178 LA+F+ES+LWPNL+L + A + L++ ++S RSF W LL FD+ LAQ Sbjct: 129 DLAVFVESELWPNLLLEAKAAGTRLALVSAKLSDRSFASWSTRPQAAYRLLSVFDLILAQ 188 Query: 179 SNTDAERFAALGSHNVVVTGNLKLDVAAPPADPAKLERLMSVTRGR---AIVVAASTHPG 235 +RF LG V +LK P D A L ++ R R A + ASTHPG Sbjct: 189 DARAHQRFERLGG-KVAGEADLKFGATPLPVDAAAL----AIERERFPTAPFLIASTHPG 243 Query: 236 EEEILIEAHKSLAGFFPGLLTVIVPRHAARGEAVARLVTEAGLRPGLRSHEDLPVATTDI 295 E+EI+++A +L P ++ PRH RG A+ L GL LRS P ++ Sbjct: 244 EDEIVLDAIVALPHRPP---VILAPRHVERGPAITALAEARGLSASLRSRA--PGQPAEV 298 Query: 296 YVADTMGELGLFYRLAPIVFMGGSLVAH-GGQNPIEAIKLGAAIVHGPHVFNFTDVYEAL 354 VADT+GE+GL++RLA + GSLV GG NP+EA +L + GP V N+T Y L Sbjct: 299 VVADTLGEMGLWFRLAGGCVIAGSLVPDIGGHNPLEAARLDCPAISGPFVENWTSAYAGL 358 Query: 355 DRAGGARRAD 364 + AGG AD Sbjct: 359 ETAGGVVMAD 368