BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0007.p         (148 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEII1040 [FJ] COG0590 Cytosine/adenosine deaminases Bme Brucell...   202   2e-52
AGc1234 [FJ] COG0590 Cytosine/adenosine deaminases Atu Agrobacte...   200   1e-51
SMc00905 [FJ] COG0590 Cytosine/adenosine deaminases Sme Sinorhiz...   190   8e-49
mll8252 [FJ] COG0590 Cytosine/adenosine deaminases Mlo Mesorhizo...   182   2e-46
CC0231 [FJ] COG0590 Cytosine/adenosine deaminases Ccr Caulobacte...   138   3e-33

>BMEII1040 [FJ] COG0590 Cytosine/adenosine deaminases Bme Brucella melitensis
          Length = 204

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 94/142 (66%), Positives = 114/142 (80%)

Query: 7   MDLALKTAENAGKAGEVPIGCVIVRGYEVIATAGNRTLTDRDPTAHAEILAIRQAAEAIG 66
           MD+AL+ A  AG+ GEVPIG VIVR  E+IA AGNRT    D TAHAEIL IRQA E +G
Sbjct: 63  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 122

Query: 67  TERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFAQPTCHHVPE 126
           +ERL+DCDLYVTLEPC MCA AISFAR+RRLYYGA+DPKGG +E G RF+ QPTCHH PE
Sbjct: 123 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 182

Query: 127 VYGAVGESESARLLREFFRERR 148
           +Y    E+++ ++L++FFRE+R
Sbjct: 183 IYPGFCEADARKILKDFFREKR 204


>AGc1234 [FJ] COG0590 Cytosine/adenosine deaminases Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 152

 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 99/143 (69%), Positives = 112/143 (78%)

Query: 6   FMDLALKTAENAGKAGEVPIGCVIVRGYEVIATAGNRTLTDRDPTAHAEILAIRQAAEAI 65
           FM+LAL  A +AG+  EVPIG V+V    VIA +GNRT    D TAHAEI  IR A EA+
Sbjct: 7   FMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIRMACEAL 66

Query: 66  GTERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFAQPTCHHVP 125
           G ERL   DLYVTLEPCTMCA AISFAR+RRLYYGA DPKGGAVESGVRFF+QPTCHH P
Sbjct: 67  GQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQPTCHHAP 126

Query: 126 EVYGAVGESESARLLREFFRERR 148
           +VY  + ESESA +LR+FFRE+R
Sbjct: 127 DVYSGLAESESAEILRQFFREKR 149


>SMc00905 [FJ] COG0590 Cytosine/adenosine deaminases Sme Sinorhizobium
           meliloti
          Length = 149

 Score =  190 bits (483), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 95/143 (66%), Positives = 108/143 (75%)

Query: 6   FMDLALKTAENAGKAGEVPIGCVIVRGYEVIATAGNRTLTDRDPTAHAEILAIRQAAEAI 65
           FM  AL+ A  A   GEVPIG V+V   ++IA AGNRT    D TAHAEI AIR AA A+
Sbjct: 7   FMQAALQEARKAAARGEVPIGAVVVLDGKMIAAAGNRTRELNDITAHAEIEAIRHAAAAV 66

Query: 66  GTERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFAQPTCHHVP 125
           G ERL   DLYVTLEPCTMCA AISFAR+RRLYYGA DPKGGAV++GVRF+A PTCHHVP
Sbjct: 67  GDERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYASPTCHHVP 126

Query: 126 EVYGAVGESESARLLREFFRERR 148
           +VY  + E E+A +LREFF  RR
Sbjct: 127 DVYSGLAEREAADILREFFAGRR 149


>mll8252 [FJ] COG0590 Cytosine/adenosine deaminases Mlo Mesorhizobium loti
          Length = 149

 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 95/148 (64%), Positives = 112/148 (75%)

Query: 1   MSAPSFMDLALKTAENAGKAGEVPIGCVIVRGYEVIATAGNRTLTDRDPTAHAEILAIRQ 60
           M  P FM LALK AE A   GEVP+G VI  G  V+A AGNRT    DPTAHAE+L IR+
Sbjct: 1   MKRPDFMALALKEAEAAALRGEVPVGAVIANGSTVVAKAGNRTRELADPTAHAEMLVIRE 60

Query: 61  AAEAIGTERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFAQPT 120
           A   + +ERL   DLYVTLEPC MCAGAISFAR+RRLY+GA D KGGAV +GVRFFA PT
Sbjct: 61  ACGKLSSERLTGHDLYVTLEPCAMCAGAISFARLRRLYFGAPDEKGGAVVNGVRFFASPT 120

Query: 121 CHHVPEVYGAVGESESARLLREFFRERR 148
           CHH P++Y  +GE+E+A LL++FF+ERR
Sbjct: 121 CHHTPDIYPGMGETEAALLLKDFFKERR 148


>CC0231 [FJ] COG0590 Cytosine/adenosine deaminases Ccr Caulobacter
           vibrioides
          Length = 161

 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/130 (62%), Positives = 90/130 (69%), Gaps = 2/130 (1%)

Query: 21  GEVPIGCVIVRGY--EVIATAGNRTLTDRDPTAHAEILAIRQAAEAIGTERLVDCDLYVT 78
           GE P+G VI+     EVIATAGN  +   DPTAHAEI A+R AA  +G  RL D  L VT
Sbjct: 28  GETPVGAVILDPSTGEVIATAGNGPIAAHDPTAHAEIAAMRAAAAKLGNYRLTDLTLVVT 87

Query: 79  LEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFAQPTCHHVPEVYGAVGESESAR 138
           LEPC MCAGAIS AR+ R+ +GA DPKGGAV  G +FFAQPTCH  PEV G V   ESA 
Sbjct: 88  LEPCAMCAGAISHARIGRVVFGADDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLADESAD 147

Query: 139 LLREFFRERR 148
           LLR FFR RR
Sbjct: 148 LLRGFFRARR 157