BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0093.0020.p (304 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr6536 [E] COG1176 ABC-type spermidine/putrescine transport sys... 334 1e-91 SMc00772 [E] COG1176 ABC-type spermidine/putrescine transport sy... 323 4e-88 BMEI0413 [E] COG1176 ABC-type spermidine/putrescine transport sy... 318 1e-86 AGc1087 [E] COG1176 ABC-type spermidine/putrescine transport sys... 303 4e-82 PA0303 [E] COG1176 ABC-type spermidine/putrescine transport syst... 268 2e-71 >mlr6536 [E] COG1176 ABC-type spermidine/putrescine transport system, permease component I Mlo Mesorhizobium loti Length = 322 Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 180/293 (61%), Positives = 228/293 (77%) Query: 12 RLAAIAPYLWMVLFFLVPFGFVLKISLSQTAIAQPPYTPVFDFTAGRAALAAAFAQLSFD 71 RL I PYLW++ FFL+PF V KISLSQTAIA PPYTPV DF+ G + A F L+FD Sbjct: 30 RLVIIVPYLWLLFFFLIPFVIVFKISLSQTAIAMPPYTPVLDFSDGISGFFAGFRDLNFD 89 Query: 72 NFRLLLQDNLYILSYLRSLVVAVSSTLILLLIGYPIAYGMARLPQRWQGVAMMLVIVPFW 131 N+ L QD LY +Y+ S+++A ST++ L++GYPIAYGM+R P + +MLVI+PFW Sbjct: 90 NYVWLTQDALYFKAYVTSVIIAAISTVLTLIVGYPIAYGMSRAPATIRPTLLMLVILPFW 149 Query: 132 TSFLIRIYAWINILQHDGLLNQMLLALHIVSAPVVWLSTDSAMYLGIVYSYLPFMILPLY 191 TSFLIR+YAWI IL+ +GLLNQ+LL+LHI++ P+V L+T +A+++GIVYSYLPFM+LPLY Sbjct: 150 TSFLIRVYAWIGILKPEGLLNQLLLSLHIINQPLVILNTYTAIFIGIVYSYLPFMVLPLY 209 Query: 192 ATLSRMDASLLEAAGDLGASPLQAFWLVTFPLSLPGVGAGALLCFIPVVGEFVIPDLLAG 251 ++L +MD SL+EAA DLG P AFW +TFPLSLPGV AG LL FIP VGEFVIPDLL G Sbjct: 210 SSLEKMDYSLIEAAKDLGCPPTAAFWKITFPLSLPGVIAGCLLVFIPAVGEFVIPDLLGG 269 Query: 252 SNSLMIGQTLWLEFFTNKDWPVASAAAVALLLLLVPPLVLYDRLQRRQLEAGR 304 S +LMIG+TLW EFF N+DWPV+SA AV LLLLL P++L+ + Q R E G+ Sbjct: 270 SQTLMIGKTLWNEFFANRDWPVSSAVAVILLLLLTVPIMLFQQAQARAQEQGK 322 >SMc00772 [E] COG1176 ABC-type spermidine/putrescine transport system, permease component I Sme Sinorhizobium meliloti Length = 303 Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 165/288 (57%), Positives = 217/288 (75%) Query: 11 ARLAAIAPYLWMVLFFLVPFGFVLKISLSQTAIAQPPYTPVFDFTAGRAALAAAFAQLSF 70 +RL I PY W++ FFL+PF V +ISLSQTA+A PPY PVFD G + + + S Sbjct: 10 SRLVIIIPYAWLLFFFLIPFFIVFRISLSQTAVAMPPYMPVFDLAGGLSGIMEKLGEFSL 69 Query: 71 DNFRLLLQDNLYILSYLRSLVVAVSSTLILLLIGYPIAYGMARLPQRWQGVAMMLVIVPF 130 DN+ L +D LY +Y+ S+V+A ST + LLIGYPIAYGMA+ P+ + +M+VI+PF Sbjct: 70 DNYVWLTEDVLYFNAYVSSVVIAAISTFLTLLIGYPIAYGMAKAPRSLRPTLLMIVILPF 129 Query: 131 WTSFLIRIYAWINILQHDGLLNQMLLALHIVSAPVVWLSTDSAMYLGIVYSYLPFMILPL 190 WTSFLIR+YAWI IL+ +GLLNQ+L A+ ++ P++ L+T+ A+Y+GIVYSYLPFM+LP+ Sbjct: 130 WTSFLIRVYAWIAILKPEGLLNQVLSAVGLIDQPLIILNTNLAIYIGIVYSYLPFMVLPI 189 Query: 191 YATLSRMDASLLEAAGDLGASPLQAFWLVTFPLSLPGVGAGALLCFIPVVGEFVIPDLLA 250 Y+ L +MD SL EAA DLG +P AFW VTFPLSLPGV AG LL FIP VGEFVIPDLL Sbjct: 190 YSALEKMDHSLTEAAQDLGCTPAAAFWRVTFPLSLPGVVAGCLLVFIPAVGEFVIPDLLG 249 Query: 251 GSNSLMIGQTLWLEFFTNKDWPVASAAAVALLLLLVPPLVLYDRLQRR 298 GS +LMIG+TLW EF +N+DWPV+SA A+ LL++LV P+V + +Q + Sbjct: 250 GSETLMIGKTLWSEFNSNRDWPVSSAVAIILLMILVIPIVYFQNIQAK 297 >BMEI0413 [E] COG1176 ABC-type spermidine/putrescine transport system, permease component I Bme Brucella melitensis Length = 303 Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 169/301 (56%), Positives = 224/301 (74%) Query: 4 RRIFARPARLAAIAPYLWMVLFFLVPFGFVLKISLSQTAIAQPPYTPVFDFTAGRAALAA 63 R I + +RL PYLW+++FFLVPF V KISLS+ A+A P Y P FD G AA Sbjct: 3 RVIASIASRLVIAVPYLWLLVFFLVPFFIVFKISLSEVAMAIPAYAPTFDLARGFAANWE 62 Query: 64 AFAQLSFDNFRLLLQDNLYILSYLRSLVVAVSSTLILLLIGYPIAYGMARLPQRWQGVAM 123 QLSFDN+ LL D LY +YL S+ +A ST++ L++ YP+AYG+AR P + + Sbjct: 63 KIKQLSFDNYLWLLDDPLYYKAYLSSVRIAAISTVLTLIVAYPMAYGIARAPATIRPTLL 122 Query: 124 MLVIVPFWTSFLIRIYAWINILQHDGLLNQMLLALHIVSAPVVWLSTDSAMYLGIVYSYL 183 M+VI+PFWTSFLIR+YAWI IL+ +GLLNQ L+ L+I+ P+ L+TD+A+++GIVYSYL Sbjct: 123 MMVILPFWTSFLIRVYAWIGILKPEGLLNQFLMGLNIIDTPLNILNTDTAVFIGIVYSYL 182 Query: 184 PFMILPLYATLSRMDASLLEAAGDLGASPLQAFWLVTFPLSLPGVGAGALLCFIPVVGEF 243 PFM+LP+Y++L +MD SL+EAA DLG +P AFW +TFPLSL GV AG L FIP VGEF Sbjct: 183 PFMVLPIYSSLEKMDYSLIEAAQDLGCTPFAAFWKITFPLSLAGVLAGCFLVFIPAVGEF 242 Query: 244 VIPDLLAGSNSLMIGQTLWLEFFTNKDWPVASAAAVALLLLLVPPLVLYDRLQRRQLEAG 303 VIPDLL GS +LMIG+T+W EFF+N+DWPV+SA AV LL+LL+ P+V++ ++Q R E G Sbjct: 243 VIPDLLGGSQTLMIGKTIWSEFFSNRDWPVSSAVAVVLLVLLIVPIVIFQQVQARAQEKG 302 Query: 304 R 304 + Sbjct: 303 K 303 >AGc1087 [E] COG1176 ABC-type spermidine/putrescine transport system, permease component I Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 321 Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 161/288 (55%), Positives = 210/288 (72%), Gaps = 5/288 (1%) Query: 13 LAAIAPYLWMVLFFLVPFGFVLKISLSQTAIAQPPYTPVFDFTAGRAALAAAFAQLSFDN 72 L PY W++LFF PF ++KISLS TAI+ PPYTPVF+ G + L F+QL F+N Sbjct: 35 LVVAVPYFWLLLFFAAPFLIIVKISLSDTAISMPPYTPVFE---GFSKLGEFFSQLDFEN 91 Query: 73 FRLLLQDNLYILSYLRSLVVAVSSTLILLLIGYPIAYGMARLPQRWQGVAMMLVIVPFWT 132 + L +D LYI +YL SL +A ST +LLLIGYP+A MAR P + +MLVI+PFWT Sbjct: 92 YLFLTEDPLYIEAYLSSLRIAFISTFLLLLIGYPMALAMARAPSSVRPTLVMLVILPFWT 151 Query: 133 SFLIRIYAWINILQHDGLLNQMLLALHIV--SAPVVWLSTDSAMYLGIVYSYLPFMILPL 190 SFLIR+YAWI IL+ +GLL + L + V T++A+++GIVYSYLPFM+LPL Sbjct: 152 SFLIRVYAWIGILKPEGLLTVLFQWLGFLGPDQQVNIFRTETAIFIGIVYSYLPFMVLPL 211 Query: 191 YATLSRMDASLLEAAGDLGASPLQAFWLVTFPLSLPGVGAGALLCFIPVVGEFVIPDLLA 250 Y+ L ++D +LLEAA DLG P +AFW +TFPLSLPGV AGA++CFIP+ GEFVIPDLL Sbjct: 212 YSALEKLDNTLLEAAADLGCPPWKAFWKITFPLSLPGVVAGAMICFIPITGEFVIPDLLG 271 Query: 251 GSNSLMIGQTLWLEFFTNKDWPVASAAAVALLLLLVPPLVLYDRLQRR 298 G+ +LMIG+TLW EFF N+DWP+ASA AV LL+LLV P+ ++ Q++ Sbjct: 272 GAQTLMIGKTLWTEFFGNRDWPLASAVAVLLLILLVVPIAIFQNQQKK 319 >PA0303 [E] COG1176 ABC-type spermidine/putrescine transport system, permease component I Pae Pseudomonas aeruginosa Length = 293 Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 141/270 (52%), Positives = 194/270 (71%), Gaps = 5/270 (1%) Query: 33 VLKISLSQTAIAQPPYTPVFDFTAGRAALAAAFAQLSFDNFRLLLQDNLYILSYLRSLVV 92 VLKISL++ +A PPYT +F + + + L+ N+ +L D LYI +YL SL + Sbjct: 27 VLKISLAEADVAIPPYTEIFAYADQQLQVL-----LNLGNYLMLTDDPLYIDAYLGSLKM 81 Query: 93 AVSSTLILLLIGYPIAYGMARLPQRWQGVAMMLVIVPFWTSFLIRIYAWINILQHDGLLN 152 A STLI LL+GYP+AY +AR Q Q V ++L+++P WT+ LIR+YAW+ IL ++GLLN Sbjct: 82 AFISTLICLLVGYPMAYAIARSSQSSQTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLN 141 Query: 153 QMLLALHIVSAPVVWLSTDSAMYLGIVYSYLPFMILPLYATLSRMDASLLEAAGDLGASP 212 +L+ L ++S P+ L+T+ A+Y+GIVYSYLPFMILPLYA L + D SLLEAA DLGA Sbjct: 142 SVLMGLGLISEPLTILNTNIAVYIGIVYSYLPFMILPLYANLVKHDPSLLEAASDLGARN 201 Query: 213 LQAFWLVTFPLSLPGVGAGALLCFIPVVGEFVIPDLLAGSNSLMIGQTLWLEFFTNKDWP 272 +FW +T PLS G+ AG +L FIP VGEFVIP+LL G +LMIG+ LW EFF N+DWP Sbjct: 202 FTSFWKITVPLSKNGIIAGCMLVFIPAVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWP 261 Query: 273 VASAAAVALLLLLVPPLVLYDRLQRRQLEA 302 VASA AV +L +L+ P++L+++ Q ++LE Sbjct: 262 VASALAVVMLAILIIPIILFNKNQAKELEG 291