BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0093.0009.p (341 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc1930 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 182 9e-46 AGl129GM [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate tran... 94 6e-19 mlr6799 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 69 1e-11 CAC1400 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 69 2e-11 mll8573 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 65 3e-10 >AGc1930 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 347 Score = 182 bits (462), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 109/318 (34%), Positives = 163/318 (51%), Gaps = 8/318 (2%) Query: 23 DTTIKFTLGWKTQGSDAAFFYAKDNGYFKEEGLNVVIDQGEGSGATVTRIMSGAYDAGFG 82 +T +KFTL WK +G A F A D GYFK EGL+V ID G GS + R+ +GAY GFG Sbjct: 33 ETPVKFTLDWKFEGPAAGFLLALDKGYFKAEGLDVTIDSGNGSVEAIPRVATGAYQMGFG 92 Query: 83 DVNAIIQNAATKPQDAPVMVYMMWNQPPFAIVAKNSSGIK-TIKDFEGHTLGGAQGTPTT 141 D+N++++ P VYM++ +P FA+V + S G+ K EG LG Sbjct: 93 DINSVMKFLDEDPSQKIKAVYMVYERPTFAVVGRKSLGVTGDPKSLEGKKLGAPPPDGAF 152 Query: 142 RLLPVFVHKNGLDGEKIKVSNMAPNLQEPMLIKGDIDAALVFNITSYFNVVLNRQD---P 198 P F GLD KIK+ ++ ++EPML KGD+DA F F+V+LN + Sbjct: 153 AQWPAFKQVAGLDDSKIKIESIGFPVREPMLAKGDVDAVFGFA----FSVILNLKKQGIA 208 Query: 199 DKDFKWFSFGDYGLDLYSNGVMVSRKLIASNPKAVAGLVRAINRGAIAVAKDQNAAMKAA 258 D D ++GL+LY N V+V+ NP+AV G ++A+ +G K + A Sbjct: 209 DDDISTILMAEHGLNLYGNAVLVNTDFAEKNPEAVKGFLKALAKGFADSVKTPEEGVAAV 268 Query: 259 LNYDNLINVDVEKRRLQYSFEKLIVSPEMKDIGIGDVRDDRMARAIGFIVEGYQLARTPA 318 L + ++ +E RL + I +P + + G+G V R+A ++ + L Sbjct: 269 LKRNETLDSAIELERLNMANSMNIKTPYVVENGMGGVDPARLAASLDTLKVSMGLKGNVK 328 Query: 319 PAEVFSREFLPPRAEREL 336 +VF +LPP+ ER L Sbjct: 329 AEQVFDAAYLPPKEERML 346 >AGl129GM [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 329 Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 14/244 (5%) Query: 1 MLRKVSAALLGLAL-IAG--PARAEDTTIKFTLGWKTQGSDAAFFYAKDNGYFKEEGLNV 57 M + ++ +++ LA+ +AG A AED + L + G F+Y + G++K+ G+++ Sbjct: 5 MRKTLTGSVVALAISLAGIQSAAAEDK-VTLRLNFLLSGVHTIFYYGAEKGFYKDAGIDL 63 Query: 58 VIDQGEGSGATVTRIMSGAYDAGFGDVNAIIQNAATKPQDAPV-MVYMMWNQPPFAIVAK 116 I +G+GS TV + +G G D ++I A+ + APV V + N P+A+ + Sbjct: 64 QIGEGQGSARTVQSVATGGDMFGIADGGSVIAGAS---KGAPVKSVLGLLNTSPYAMTFR 120 Query: 117 NSSGIKTIKDFEGHTLGGAQGTPTTRLLPVFVHKNGLDGEKIKVSNM-APNLQEPMLIKG 175 SG+K+IKD EG T+ + G + LLP KNG+D K+ + N+ P + + I Sbjct: 121 ADSGVKSIKDVEGKTVAASAGEASLALLPALWKKNGVDASKVNILNVDGPG--KIIAIMQ 178 Query: 176 DIDAALVFNITSYFNVVLNRQDPDKDFKWFSFGDYGLDLYSNGVMVSRKLIASNPKAVAG 235 D A ++ + + VVLN + ++ FSF + G++ ++ + KLI SN V Sbjct: 179 DRAAGILGGLENQV-VVLNSKGLKQNV--FSFAELGVNTQGLTIITNTKLIDSNQDLVKR 235 Query: 236 LVRA 239 V A Sbjct: 236 FVAA 239 >mlr6799 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Mlo Mesorhizobium loti Length = 336 Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 38/322 (11%) Query: 26 IKFTLGWKTQGSDAAFFYAKDNGYFKEEGLNVV-IDQGEGSGATVTRIMSGAYDAGFGDV 84 + L W +G+ A FF K+ G+F + ++V I +G GS + + + D GFGD+ Sbjct: 31 VNVQLDWVVRGNHAMFFVGKEKGFFAKNDIDVAEIRKGSGSPDAMRLVGNENADFGFGDL 90 Query: 85 NAIIQNAATKPQDAPVMVYMMWNQ-PPFAIVAKNSSGIKTIK-----DFEGHTLGGAQGT 138 + A + Q+ PV+ NQ P I+ S KT+K D +G T+G Sbjct: 91 PTL---AVARSQNVPVVALAAVNQHSPLGII----SLAKTLKLAKPSDLKGLTIGIHPAG 143 Query: 139 PTTRLLPVFVHKNGLDGEKIKVSNMAPNLQEPMLIKGDIDAALVFNITSYFNVVLNRQDP 198 T F+ NGL + + +++++P + +L+ V + Y ++ + P Sbjct: 144 STYIFFKGFLAANGLTEKDMTLNSVSPPYESYLLL------GRVQTVVGY----VDAEVP 193 Query: 199 DKDFKWFSFG--------DYGLDLYSNGVMVSRKLIASNPKAVAGLVRAINRG-AIAVAK 249 + + K G D+G Y +G+ S+K+I P+ VA V+A VA Sbjct: 194 ELEAKAGGPGSLSIMMGSDHGWKAYGSGLFTSQKMIKDKPEIVARFVKAYREAFDYVVAH 253 Query: 250 DQNAA---MKAALNYDNLINVDVEKRRLQYSFEKLIVSPEMKDIGIGDVRDDRMARAIGF 306 + AA KAA Y + DV ++ SP+ K+ G+G + + + Sbjct: 254 PEEAAEITAKAAPGYAD--KKDVLLAQINADIASTFTSPDTKEHGLGWMTKTQWEETLKT 311 Query: 307 IVEGYQLARTPAPAEVFSREFL 328 + + L + +VF+ +FL Sbjct: 312 LTDQGVLKAALSADDVFTDKFL 333 >CAC1400 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Cac Clostridium acetobutylicum Length = 333 Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/304 (26%), Positives = 127/304 (41%), Gaps = 26/304 (8%) Query: 1 MLRKVSAALLGLALIAGPA--------RAEDTTIKFTLGWKTQGSDAAFFYAKDNGYFKE 52 +L +SA ++ A+I G + + TT+ L W + + A D GY+KE Sbjct: 6 ILSLISAVIMTSAIITGCTSNGSSSSNKLDKTTV--ILDWTPNTNHTGMYVALDKGYYKE 63 Query: 53 EGLNVVIDQGEGSGATVTRIMSGAYDAGFG---DVNAIIQNAATKPQDAPVMVYMMWNQP 109 EGL+V I Q SG+ I + D G DV + P V + N Sbjct: 64 EGLDVKIQQ-PSSGSVTDLIATNKGDFGVSYQEDVTYALTGKTPLPIKTIAAV-LQHNTS 121 Query: 110 PFAIVAKNSSGIKTIKDFEGHTLGGAQGTPTTR-LLPVFVHKNGLDGEKIKVSNMAPNLQ 168 FA A S IK+IKD EG GG G+P+ ++ + KNG D K+K+ N+ N Sbjct: 122 GFA--APKSKNIKSIKDAEGKVYGG-WGSPSEEAVIKAIMEKNGADFSKLKIVNIG-NDD 177 Query: 169 EPMLIKGDIDAALVFNITSYFNVVLNRQDPDKDFKWFSFGDYGLDLYSNGVMVSRKLIAS 228 K ++D A +F + + + D D+ D LD Y+ ++ + K++ Sbjct: 178 YFAATKKNVDFAWIFE--GWTGIEAKLKGIDLDYVAVKDLDPALDYYTPVIITNNKILKE 235 Query: 229 NPKAVAGLVRAINRGAIAVAKDQNAAMKAALNY----DNLINVDVEKRRLQYSFEKLIVS 284 NP + A +G AK + K Y D + V+ +K + + + Sbjct: 236 NPAKAKKFMLATKKGYQYAAKHPEESAKILRKYAPEIDEKLAVESQKYMATHYADDMSKW 295 Query: 285 PEMK 288 EMK Sbjct: 296 GEMK 299 >mll8573 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Mlo Mesorhizobium loti Length = 342 Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 18/259 (6%) Query: 2 LRKVSAALLGLALIAGPARAEDTTIKFTLGWKTQGSDAAFFYAKDNGYFKEEGLNVVIDQ 61 L V+ A G+ L+ P + W A NGYFK+ GL+V Sbjct: 11 LAAVAMASSGMQLVLTPGAKAAGKVVIQYDWLMSNGQIGDIAAVANGYFKDAGLDVEFSP 70 Query: 62 GEGSGATVTRIMSGAYDAGFGDVNAIIQNAATKPQDAPV-MVYMMWNQPPFAIVAKNSSG 120 G + +TV ++SGA A G + Q A + PV ++ + P+A+ +K S+ Sbjct: 71 GGPNASTVPPVISGA--AQLGQFSETPQLFAARASGVPVKIIACGFRTGPYALTSKASNP 128 Query: 121 IKTIKDFEGHTLGGAQGTPTTR-LLPVFVHKNGLDGEKIKVSNMAPNLQEPMLIKGDIDA 179 IK + D +G +G PT R ++ + KNG+ + V N+ + L++GD+DA Sbjct: 129 IKGVADLKGKKIG---IQPTARFVMDEILAKNGMSASDLTVINV--GFDKGPLVRGDVDA 183 Query: 180 --ALVFNITSYFNVVLNRQDPDKDFKWFSFGDYGLDLYSNGVMVSRKLIASNPKAVAGLV 237 + N + V +R D D GL+ Y++ + I +P +A + Sbjct: 184 IGGWITNTQALSVVGEDRID-------LLVRDLGLNSYADVYFATDAAIEKDPDTLAKFI 236 Query: 238 RAINRGAIAVAKDQNAAMK 256 A+ +G V + A+K Sbjct: 237 GAVAKGWGWVHANPQEAVK 255