BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0090.0023.p         (106 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Rv2456c [GEPR] COG0477 Permeases of the major facilitator superf...    74   1e-13
MT2531 [GEPR] COG0477 Permeases of the major facilitator superfa...    74   1e-13
AGc2694 [GEPR] COG0477 Permeases of the major facilitator superf...    57   1e-08

>Rv2456c [GEPR] COG0477 Permeases of the major facilitator superfamily Mtu
           Mycobacterium tuberculosis H37Rv
          Length = 418

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 54/80 (67%)

Query: 1   VIPFAGLAIRGLLFATVRDPYVLVMVQIFDGITAAIFSVMVPLIVADVAFGSGHFNLAQG 60
           ++ FA L  RG L+    + Y LV VQ+ DGI A IF  + PL+V DV  G+GHFN++ G
Sbjct: 292 LVGFAVLTARGFLYTLSDNSYWLVGVQLLDGIGAGIFGALFPLVVQDVTHGTGHFNISLG 351

Query: 61  IVGTAVGIGASLSTVLAGYV 80
            V TA GIGA+LS ++AG++
Sbjct: 352 AVTTATGIGAALSNLVAGWI 371


>MT2531 [GEPR] COG0477 Permeases of the major facilitator superfamily MtC
           Mycobacterium tuberculosis CDC1551
          Length = 418

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 54/80 (67%)

Query: 1   VIPFAGLAIRGLLFATVRDPYVLVMVQIFDGITAAIFSVMVPLIVADVAFGSGHFNLAQG 60
           ++ FA L  RG L+    + Y LV VQ+ DGI A IF  + PL+V DV  G+GHFN++ G
Sbjct: 292 LVGFAVLTARGFLYTLSDNSYWLVGVQLLDGIGAGIFGALFPLVVQDVTHGTGHFNISLG 351

Query: 61  IVGTAVGIGASLSTVLAGYV 80
            V TA GIGA+LS ++AG++
Sbjct: 352 AVTTATGIGAALSNLVAGWI 371


>AGc2694 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 498

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%)

Query: 1   VIPFAGLAIRGLLFATVRDPYVLVMVQIFDGITAAIFSVMVPLIVADVAFGSGHFNLAQG 60
           ++  A L IRGLL +   D +V+  VQ  DG+ A +  ++ P+ V  +  G+G FN+   
Sbjct: 377 IVALAALPIRGLLASAFTDFWVIFPVQFLDGVGAGLLGIVTPVAVERILKGTGRFNVGLA 436

Query: 61  IVGTAVGIGASLSTVLAGYVSDKLGSS 87
            V    GIGASLS V+AG++  K G S
Sbjct: 437 SVMMVQGIGASLSNVVAGWLVTKGGYS 463