BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0090.0012.p (234 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ... 247 1e-65 SP0753 [E] COG0410 ABC-type branched-chain amino acid transport ... 242 4e-64 PAE1388 [E] COG0410 ABC-type branched-chain amino acid transport... 241 1e-63 BMEII0873 [E] COG0410 ABC-type branched-chain amino acid transpo... 237 2e-62 DR1034 [E] COG0410 ABC-type branched-chain amino acid transport ... 231 7e-61 >TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 239 Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 118/234 (50%), Positives = 168/234 (71%) Query: 1 MLELSRVSASYGSVPAITDVSISIGEGEAVGLLGANGAGKSTTLRAVSGLVKLFAGKVTF 60 +LE+ + YG++ AI + + + G+ V L+GANGAGK+TTL A++GLV+ GK+ F Sbjct: 5 VLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIF 64 Query: 61 DGVDLATLPPYRIPELGIAHVPEGRQVFPEMTVQENLEIGAYTPKAKADRARTMELVYSI 120 +G D+ P + I +GIA VPEGR++FPE+TV ENL +GAY K K R +E ++S+ Sbjct: 65 NGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSL 124 Query: 121 FPRLADRRKQLAGTMSGGEQQMVAVGRGLMLKPRLLMLDEPSLGLAPVMTDVTFEKIGEI 180 FPRL +R KQL GT+SGGEQQM+A+GR LM +P+LLM+DEPSLGLAP++ FE I +I Sbjct: 125 FPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKI 184 Query: 181 HKMGTAILLVEQNVSRALSLVQRAYVLESGNVIMQGSSAELAGNKQVQAAYLGI 234 ++ GT ILLVEQN AL + YVLE+G ++++G ++EL N+ V+ AYLG+ Sbjct: 185 NQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVRKAYLGV 238 >SP0753 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 236 Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 114/233 (48%), Positives = 166/233 (71%) Query: 1 MLELSRVSASYGSVPAITDVSISIGEGEAVGLLGANGAGKSTTLRAVSGLVKLFAGKVTF 60 ML++ +S YG + A+ DVS + EGE V L+GANGAGK+T LR +SGLV+ +GK+ F Sbjct: 3 MLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKIEF 62 Query: 61 DGVDLATLPPYRIPELGIAHVPEGRQVFPEMTVQENLEIGAYTPKAKADRARTMELVYSI 120 G ++ +P +I G++ VPEGR VFP +TV ENLE+GA+ K + + ++ V+S Sbjct: 63 LGQEIQKMPAQKIVASGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVFSR 122 Query: 121 FPRLADRRKQLAGTMSGGEQQMVAVGRGLMLKPRLLMLDEPSLGLAPVMTDVTFEKIGEI 180 FPRL +R+ Q A T+SGGEQQM+A+GR LM P+LL+LDEPS+GLAP+ F+ I +I Sbjct: 123 FPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQDI 182 Query: 181 HKMGTAILLVEQNVSRALSLVQRAYVLESGNVIMQGSSAELAGNKQVQAAYLG 233 K GT +LL+EQN ++AL++ R YVLE+G +++ G+ ELA +++V+ AYLG Sbjct: 183 QKQGTTVLLIEQNANKALAISDRGYVLETGRIVLSGTGKELASSEEVRKAYLG 235 >PAE1388 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Pya Pyrobaculum aerophilum Length = 234 Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 116/233 (49%), Positives = 171/233 (73%), Gaps = 1/233 (0%) Query: 2 LELSRVSASYGSVPAITDVSISIGEGEAVGLLGANGAGKSTTLRAVSGLVKLFAGKVTFD 61 L ++++S+ YG + + ++ +G V LLG NGAGK+TTL ++ G+VK + GKV Sbjct: 3 LRITQLSSGYGKLQVLFGLTFEVGNNSIVSLLGPNGAGKTTTLLSIMGVVKPWGGKVELG 62 Query: 62 GVDLATLPPYRIPELGIAHVPEGRQVFPEMTVQENLEIGAYTPKAKADRARTMELVYSIF 121 GVD+ + PPY+ ELG++ VPEGR++FPEMTV+ENL +GAYT +A+ ++E VYS+F Sbjct: 63 GVDVTSAPPYKKVELGLSLVPEGRRLFPEMTVEENLLMGAYTKRAREKARDSLEFVYSLF 122 Query: 122 PRLADRRKQLAGTMSGGEQQMVAVGRGLMLKPRLLMLDEPSLGLAPVMTDVTFEKIGEIH 181 PRL +RR+Q AGTMSGGEQQM+A+ R LM +PR+L++DEPS GLAP + F+ I ++ Sbjct: 123 PRLKERRRQKAGTMSGGEQQMLAIARALMARPRVLLIDEPSAGLAPKVVADLFQTISQL- 181 Query: 182 KMGTAILLVEQNVSRALSLVQRAYVLESGNVIMQGSSAELAGNKQVQAAYLGI 234 + ++LLVEQNV+ AL + AYVLE+G +++QG+ +ELA N+ V+ AYLG+ Sbjct: 182 RSEMSVLLVEQNVAVALEISDYAYVLENGRIVLQGTPSELAENQHVKRAYLGV 234 >BMEII0873 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 252 Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 116/234 (49%), Positives = 158/234 (67%) Query: 1 MLELSRVSASYGSVPAITDVSISIGEGEAVGLLGANGAGKSTTLRAVSGLVKLFAGKVTF 60 ML L V A YG + DVS+ + EGE V ++GANGAGK+TTLR + G ++ AGK+TF Sbjct: 19 MLTLEHVDAGYGRTTILQDVSLEVKEGEIVTIVGANGAGKTTTLRTIVGQIQPRAGKITF 78 Query: 61 DGVDLATLPPYRIPELGIAHVPEGRQVFPEMTVQENLEIGAYTPKAKADRARTMELVYSI 120 G D+ LP + + + GI +PEGRQ+FP+MTV+ENL++G Y A+A + ME V + Sbjct: 79 LGEDITHLPAHEVVDRGIILIPEGRQLFPDMTVRENLQMGTYRRAARAAQESRMEEVLEL 138 Query: 121 FPRLADRRKQLAGTMSGGEQQMVAVGRGLMLKPRLLMLDEPSLGLAPVMTDVTFEKIGEI 180 FPR+ +R Q A ++SGGEQQMVA+ RG+M PR+LM DEPSLGLAP++ F+ + +I Sbjct: 139 FPRVRERLDQTASSLSGGEQQMVAIARGMMANPRILMFDEPSLGLAPIVVSQVFDVVRKI 198 Query: 181 HKMGTAILLVEQNVSRALSLVQRAYVLESGNVIMQGSSAELAGNKQVQAAYLGI 234 GT +L+VEQNV L + R YVLE+G V++ SS L N V+ AYLGI Sbjct: 199 AATGTTVLIVEQNVFTTLKVANRGYVLENGRVVLADSSEALLNNDHVRRAYLGI 252 >DR1034 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 252 Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 113/234 (48%), Positives = 169/234 (72%), Gaps = 1/234 (0%) Query: 1 MLELSRVSASYGSVPAITDVSISIGEGEAVGLLGANGAGKSTTLRAVSGLVKLFAGKVTF 60 +LEL V + YG + A+ +++++ EGE V L+G NGAGK+TTLR +SG++K G VT+ Sbjct: 17 VLELQNVHSYYGQIEALKGLNMTVNEGEIVALIGGNGAGKTTTLRTISGMMKPKTGSVTY 76 Query: 61 DGVDLATLPPYRIPELGIAHVPEGRQVFPEMTVQENLEIGAYTPKAKADRARTMELVYSI 120 G ++ +P +++ G+AHVPEGR++FP+MTV+ENLE+GAYT KA +E + + Sbjct: 77 LGQNVTGVPSHQLIGRGMAHVPEGRRIFPQMTVRENLEVGAYTVNDKAAINARIEEGFEL 136 Query: 121 FPRLADRRKQLAGTMSGGEQQMVAVGRGLMLKPRLLMLDEPSLGLAPVMTDVTFEKIGEI 180 FPRL +R QL GTMSGGEQQM+A+ R LM+ P++L+LDEPS+GL+P+ + F I + Sbjct: 137 FPRLRERESQLGGTMSGGEQQMLAIARALMIAPKVLLLDEPSMGLSPLFVENIFSIIERL 196 Query: 181 HK-MGTAILLVEQNVSRALSLVQRAYVLESGNVIMQGSSAELAGNKQVQAAYLG 233 +K GT ILLVEQN S AL++ RAYVL++G + + G++ ++A ++ V+ AYLG Sbjct: 197 NKERGTTILLVEQNASMALAIADRAYVLQTGEIKLSGNAQDIARDETVRKAYLG 250