BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0088.0009.p (540 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1545 [T] COG5001 Predicted signal transduction protein contai... 296 1e-79 mlr4740_2 [T] COG2200 FOG Mlo Mesorhizobium loti 249 1e-65 AGl1027 [T] COG5001 Predicted signal transduction protein contai... 242 2e-63 AGl511_4 [T] COG2200 FOG Atu Agrobacterium tumefaciens strain C5... 241 3e-63 SMc00887_2 [T] COG2200 FOG Sme Sinorhizobium meliloti 231 5e-60 >RSc1545 [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Rso Ralstonia solanacearum Length = 776 Score = 296 bits (757), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 176/421 (41%), Positives = 253/421 (60%), Gaps = 10/421 (2%) Query: 96 AEGDVRDLARHDPLTGLPNRRLFDEKLDLCAGLATDTHQVAVLMLGLDGLKRIKDTHGHE 155 AE +R LA +D LTGL NR F E+LD A LA ++ +L + LDG K + DT GH Sbjct: 334 AENRIRQLAHYDTLTGLANRTNFREQLD--ARLAAPEARLGLLYIDLDGFKLVNDTKGHR 391 Query: 156 AVDKALCELATRLIDILRKDGL-LARIGGDEFGIVLPSISSLEDPANLARRMVASAADTF 214 A D L +A RL + + G+ +AR+GGDEF +++P + A LA ++ + + Sbjct: 392 AGDALLERVAQRLRAVCDRPGMAIARLGGDEFAVLVPH-DDADRAATLATALIEALGAPY 450 Query: 215 AIETGAAE---LSLGIGIAIAPLDGVNPHELVRRAERALYRAQSDGRSRVRFFEPDMDIH 271 A+ GA + + IGIA+AP G + L+ RA+ ALY A++ G+ R F DM+ Sbjct: 451 AL--GADQNVRIGASIGIALAPAHGRDTENLLARADIALYAAKAAGKGLARLFCADMETR 508 Query: 272 VERRINIERELRSAIA-ADIIEPHYQPVVSLESNRIVGFEALARWENRTLGHVPPDVFIP 330 ++ R +E +LR+A+ D + YQP+V + + ++ EAL RW + G VPPD F+P Sbjct: 509 IQARALLEAQLRAALEHQDRLFVFYQPIVDVATGKVTAREALVRWHHAERGWVPPDEFVP 568 Query: 331 IAEETGLIDALGDQVFRRACLDATAWPKTFSLAFNISPVQLRDSALGGRIISILEQTGFS 390 IAE++GLID LG V RAC +AT W +A N+SP+QL + L + + L +G + Sbjct: 569 IAEQSGLIDQLGRFVLHRACREATRWEDGARVAVNVSPMQLGKATLAQTVHAALIDSGLA 628 Query: 391 PCRLEIEITESAFVERNGAAKTVIDELRRAGVRIALDDFGTGYATLSQLLSFRLDKIKID 450 P RLEIE+TE+A ++ + + +L GVR+ALDDFGTGY++L+ L +F DKIKID Sbjct: 629 PDRLEIEVTETALIQNEAESFEDLRQLYDMGVRVALDDFGTGYSSLAHLRAFPFDKIKID 688 Query: 451 RSFVSHLDESTDSRVIVRAILGLAKGFGLTTTAEGVEDEGQLVYLVANGCTEGQGYLFSG 510 RSFV L E DS V+VRAI L + G+TT AEGVE + + + GCTE QGY + Sbjct: 689 RSFVRDLLERPDSAVLVRAIADLGRQLGVTTVAEGVETQAHVRGIREAGCTEAQGYYYGR 748 Query: 511 P 511 P Sbjct: 749 P 749 >mlr4740_2 [T] COG2200 FOG Mlo Mesorhizobium loti Length = 271 Score = 249 bits (636), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 122/248 (49%), Positives = 166/248 (66%) Query: 267 DMDIHVERRINIERELRSAIAADIIEPHYQPVVSLESNRIVGFEALARWENRTLGHVPPD 326 +M+ +R IE+ LR A++A +EPH+QP+V L + R +GFE LARW +R LG VPP Sbjct: 4 EMEEAAKRVTRIEQALRRAVSAGEVEPHFQPIVDLTTRRTIGFETLARWTDRDLGAVPPT 63 Query: 327 VFIPIAEETGLIDALGDQVFRRACLDATAWPKTFSLAFNISPVQLRDSALGGRIISILEQ 386 VFIPIAEE G+I L V R+A A +WP L+FN+SP QL D G I++IL++ Sbjct: 64 VFIPIAEERGIIGPLSQLVLRKATEAARSWPSDLFLSFNLSPSQLVDQNTGLHILAILDR 123 Query: 387 TGFSPCRLEIEITESAFVERNGAAKTVIDELRRAGVRIALDDFGTGYATLSQLLSFRLDK 446 TGF P RLEIEITE+ + +A ++++LRR G+R++LDDFGTG ++L +L F DK Sbjct: 124 TGFDPRRLEIEITETGLMNDPASAAQIVEDLRRVGIRVSLDDFGTGQSSLGRLREFHFDK 183 Query: 447 IKIDRSFVSHLDESTDSRVIVRAILGLAKGFGLTTTAEGVEDEGQLVYLVANGCTEGQGY 506 +KIDR+FVS + + S I+RAIL + +G G+ AEG+E+E Q LV GC GQGY Sbjct: 184 LKIDRAFVSSILDDRPSEHIIRAILAMCEGLGMDVVAEGIEEEAQADRLVQFGCAGGQGY 243 Query: 507 LFSGPVQA 514 LF PV A Sbjct: 244 LFGKPVDA 251 >AGl1027 [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 648 Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 158/466 (33%), Positives = 240/466 (51%), Gaps = 16/466 (3%) Query: 64 IVFVAFLLSIALSIFSVRRYRELARGIDARTIAEGDVRD---LARHDPLTGLPNRRLFDE 120 ++ A ++SI L+ YR R + ++ E + LA D LTGLPNRR F Sbjct: 183 LLVCAGMMSILLT-----NYRNFERMVISQQRTEALSNENLLLANIDSLTGLPNRRAFFA 237 Query: 121 KLDL-CAGLATDTHQVAVLMLGLDGLKRIKDTHGHEAVDKALCELATRLIDILRKDGLLA 179 L++ A ++A+ ++ LDG K + D +GH D+ L ++ RL L+ Sbjct: 238 HLEVELANAREKGTRLALGVIDLDGFKPVNDLYGHSVGDRLLINVSKRLTANLKASKAF- 296 Query: 180 RIGGDEFGIVLPSISSLEDPANLARRMVASAAD---TFAIETGAAELSLGIGIAIAPLDG 236 R+GGDEF IV P I D A L A + + + + G +S +GIA+ P Sbjct: 297 RLGGDEFAIVAPIIP---DDAQLVANANAISEELRAPYHMPEGTVHVSASMGIAVFPHLA 353 Query: 237 VNPHELVRRAERALYRAQSDGRSRVRFFEPDMDIHVERRINIERELRSAIAADIIEPHYQ 296 +L RA+ ALY A+ R F+ + + + IE L+ + + + +Q Sbjct: 354 STLEQLFDRADYALYHAKKTRRGDAVLFDAEHEKQINIEARIEHLLKQSDLKNELSVMFQ 413 Query: 297 PVVSLESNRIVGFEALARWENRTLGHVPPDVFIPIAEETGLIDALGDQVFRRACLDATAW 356 P+V + + GFEALARW + LGHVPP F IAE G++ +L + + A A+ W Sbjct: 414 PIVDIRDGKTAGFEALARWHSPVLGHVPPAQFFAIAERAGIVGSLTRPLLKMALASASTW 473 Query: 357 PKTFSLAFNISPVQLRDSALGGRIISILEQTGFSPCRLEIEITESAFVERNGAAKTVIDE 416 + L+FN+S L +I I+E + F RL++EITE+AF + +D Sbjct: 474 DPSLRLSFNLSAQDLNCHEGVLSLIGIIENSCFDTRRLDLEITETAFAHDFEQVRQSVDM 533 Query: 417 LRRAGVRIALDDFGTGYATLSQLLSFRLDKIKIDRSFVSHLDESTDSRVIVRAILGLAKG 476 LRR G I+LDDFGTGY++L++L + L KIKIDRSFV+ L E S IV+++L L++ Sbjct: 534 LRRLGCGISLDDFGTGYSSLTRLHALPLTKIKIDRSFVTDLHEKPASYKIVKSLLALSRD 593 Query: 477 FGLTTTAEGVEDEGQLVYLVANGCTEGQGYLFSGPVQAAGIPALLD 522 L EGVE +L L G T QGY+++ P++ + A L Sbjct: 594 MELECVVEGVETSAELTTLEGLGATLVQGYIYAPPLREWDVAAFLS 639 >AGl511_4 [T] COG2200 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 256 Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 117/239 (48%), Positives = 164/239 (68%), Gaps = 1/239 (0%) Query: 273 ERRINIERELRSAIAADIIEPHYQPVVSLESNRIVGFEALARWENRTLGHVPPDVFIPIA 332 ERR +E +LR AI D + +YQPV+S+E ++VG+EAL RW++ T G VPPDVFIPIA Sbjct: 1 ERR-QLETDLRLAINRDELVLNYQPVLSVECGQVVGYEALVRWQHPTRGVVPPDVFIPIA 59 Query: 333 EETGLIDALGDQVFRRACLDATAWPKTFSLAFNISPVQLRDSALGGRIISILEQTGFSPC 392 EE+G+I +LG+ V R AC A+ W +A N+SP+Q + LG + ++L QTG SP Sbjct: 60 EESGIIISLGEWVLREACRQASTWAPHLKIAVNVSPLQFSLANLGHVVCTVLMQTGLSPN 119 Query: 393 RLEIEITESAFVERNGAAKTVIDELRRAGVRIALDDFGTGYATLSQLLSFRLDKIKIDRS 452 RLE+EITE+A ++ A ++++L+ GV I +DDFGTGY++LS L SF DKIKIDRS Sbjct: 120 RLELEITEAALLKDRKATLVILNQLKALGVAIVMDDFGTGYSSLSNLQSFPFDKIKIDRS 179 Query: 453 FVSHLDESTDSRVIVRAILGLAKGFGLTTTAEGVEDEGQLVYLVANGCTEGQGYLFSGP 511 F++ + E ++R IVRA++GL + L TAEG+E + Q +V GC + QGYLF P Sbjct: 180 FIAAMSEDDNARAIVRAVIGLGRSLDLPVTAEGIETDAQYRMVVDEGCAQAQGYLFGRP 238 >SMc00887_2 [T] COG2200 FOG Sme Sinorhizobium meliloti Length = 269 Score = 231 bits (588), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 115/251 (45%), Positives = 163/251 (64%) Query: 264 FEPDMDIHVERRINIERELRSAIAADIIEPHYQPVVSLESNRIVGFEALARWENRTLGHV 323 + ++ ++ +E+ LR+AI A I+ H+QP+V L S+R VGFEALARW + LG+V Sbjct: 2 YSQEIAQEMKHATQLEQALRNAIIAGGIDVHFQPIVDLRSDRPVGFEALARWCDADLGYV 61 Query: 324 PPDVFIPIAEETGLIDALGDQVFRRACLDATAWPKTFSLAFNISPVQLRDSALGGRIISI 383 P VF+P AEE G IDAL + + R+A A +WP+ L+FN+S VQL D A R+++I Sbjct: 62 SPAVFVPFAEERGFIDALSEMLLRKAARAALSWPEDLFLSFNLSSVQLMDPATSARLLAI 121 Query: 384 LEQTGFSPCRLEIEITESAFVERNGAAKTVIDELRRAGVRIALDDFGTGYATLSQLLSFR 443 + Q G P RLE+EITE+A + G A+ ++ ELR AGVR++LDDFGTG ++L +L F Sbjct: 122 IAQVGLDPRRLELEITETAAMADAGTAQRIVTELRAAGVRVSLDDFGTGQSSLGRLRDFS 181 Query: 444 LDKIKIDRSFVSHLDESTDSRVIVRAILGLAKGFGLTTTAEGVEDEGQLVYLVANGCTEG 503 LDK+KIDR+FVS + S IV+AI+ + +G L AEG+E + + L A GC G Sbjct: 182 LDKVKIDRTFVSGISTDRTSEHIVKAIVSMCEGLELAVVAEGIEHSSEALKLKALGCGLG 241 Query: 504 QGYLFSGPVQA 514 QGY + P A Sbjct: 242 QGYFYGKPADA 252