BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0087.0047.p (1082 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value all0706 [C] COG2421 Predicted acetamidase/formamidase Nos Nostoc... 156 2e-37 CC2611 Non COG 132 5e-30 APE0528 [C] COG2421 Predicted acetamidase/formamidase Ape Aeropy... 102 5e-21 SSO2810 [C] COG2421 Predicted acetamidase/formamidase Sso Sulfol... 92 5e-18 AGl1441 [K] COG2207 AraC-type DNA-binding domain-containing prot... 85 1e-15 >all0706 [C] COG2421 Predicted acetamidase/formamidase Nos Nostoc sp. PCC 7120 Length = 328 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 127/413 (30%), Positives = 178/413 (43%), Gaps = 103/413 (24%) Query: 382 SHHHLKVSRETAHWGYLSRAIPPVMSVQSGAVVTIETLTQHAFDDYERMIKGDPG-AESV 440 +HH LK ++ T H G S + P + V S + +ET T + D K P Sbjct: 2 THHILKATKSTVHLGGFSHLLEPALKVDSSDTIDVETYTGYYIYD-----KAPPEFLTPE 56 Query: 441 FRWTAEGKSVERR-GAGPMDGSIFGRGAGEGFGVHICTGPIYVCGAEPGDVLEVQILDIW 499 F + ER+ AGP H+ TGPIYV AEPGDVLEV++ I Sbjct: 57 FLDICQNLPPERKIAAGP----------------HLLTGPIYVKDAEPGDVLEVKLEAIA 100 Query: 500 PRPSANPAYAGKSFGSNAA-AWWGFQYNDLIDPPAKRETITIFETDAEAEWARAVYSYRW 558 P G NA + WG N P + R+ Sbjct: 101 P---------SLPVGFNAIRSGWGALPNQFTQP-----------------------ALRF 128 Query: 559 TPQTDPFGVRHETMDYPGVPVDHATVEKRSGVLAGVRIPARLHFGFMAVAPRESDIIDSI 618 P + + T ++P +G++IP FG + VA E + S+ Sbjct: 129 IP----LNLANNTAEFPPN--------------SGIKIPLTPFFGILGVATPE-NARSSV 169 Query: 619 PPGYFGGNVDNWRATKGTTLYLPVAVPGALFSIGDPHFAQGDGEVNGTALELSLTGQFRF 678 PPGY+GGN+DN G+ ++LP+ VPG LFS+GD H AQGDGEVN TA+E S+ G+ + Sbjct: 170 PPGYYGGNIDNRELQAGSRIFLPIFVPGGLFSLGDGHSAQGDGEVNVTAIETSMNGRIQL 229 Query: 679 ILHKSGKATKPHVEGLAHPLLETPEEWILHGFSYGNYLRELGRNAQSEIYQRSSVDLALR 738 L K T P+ ETP + I GF+ ++D AL Sbjct: 230 TLRKDLHFTA--------PIAETPTDIITMGFA-------------------PTLDAALE 262 Query: 739 NAFRATRKFLMECYRLSEDEALALISLGVDFGVTQVADG-NWGVHAIVRKSML 790 A + FL LS ++A L SL V+F +TQV + N GVH ++ K + Sbjct: 263 QALKNMIDFLERFVNLSPEDAYVLCSLAVNFRITQVVNSPNKGVHGLLPKKLF 315 >CC2611 Non COG Length = 304 Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 87/222 (39%), Positives = 111/222 (50%), Gaps = 24/222 (10%) Query: 573 DYPGVPVDHATVEKRSGVLA---GVRIPARLHFGFMAVAP-RESDIIDSIPPGYFGGNVD 628 D+P V H V+ + GV G +P FG M VAP + + S P GGN+D Sbjct: 102 DFPERYVSHIAVDAQRGVCKPEWGPELPLAPFFGTMGVAPPAKYGRLSSREPREHGGNMD 161 Query: 629 NWRATKGTTLYLPVAVPGALFSIGDPHFAQGDGEVNGTALELSLTGQFRFILHKSGKATK 688 N G+TLYLPV VPGA FS+GD H QGDGEV ALE+ LTG F F+LHK Sbjct: 162 NKELVAGSTLYLPVWVPGANFSVGDGHGRQGDGEVCVNALEMGLTGTFTFVLHKKANGAA 221 Query: 689 PHVEGLAHPLLETPEEWILHGFSYGNYLRELGRNAQSEIYQRSSVDLALRNAFRATRKFL 748 + A P ETP ++L GF +DLA++ A R T F+ Sbjct: 222 -DIAPFAWPRAETPTHYVLMGF-------------------HEDLDLAMKQALRQTIDFI 261 Query: 749 MECYRLSEDEALALISLGVDFGVTQVADGNWGVHAIVRKSML 790 L+ +A SL VDF VTQ +G GVHA++ K +L Sbjct: 262 TARSNLTRVQAYQFCSLAVDFRVTQTVNGEKGVHALLSKGLL 303 >APE0528 [C] COG2421 Predicted acetamidase/formamidase Ape Aeropyrum pernix Length = 377 Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 99/321 (30%), Positives = 151/321 (47%), Gaps = 37/321 (11%) Query: 473 VHICTGPIYVCGAEPGDVLEVQILDIWPRPSANPAYAGKSFGSNAA-AWWGFQYNDLIDP 531 VH TGP+YV GA+PGD+L V++LDI P FG A +GF DL D Sbjct: 69 VHPLTGPVYVRGAKPGDLLVVEVLDIKAEP----------FGFTVAIPGFGF-LRDLFDK 117 Query: 532 PAKRETITIFETDAEAEWARAVYSYRWTPQTDPF-GVRHETMDYPGVPVDHATVEKRSGV 590 P K + + ++ + + R DPF GV P + E+ + Sbjct: 118 PYKIR----WRIEGGYAFSEDLPNVRI--PGDPFLGVMGVA---PSKELLKEIKEREDRL 168 Query: 591 L--AGVRIPARLHFGFMAVAPRE---SDIIDSIPPGYFGGNVDNWRATKGTTLYLPVAVP 645 L G +P AV PRE S+ + +IPP GGN+D + G+ +Y PV V Sbjct: 169 LKRGGFVLPPTPE---GAVPPREPVASEGLRTIPPRENGGNLDVRHFSPGSKIYFPVFVE 225 Query: 646 GALFSIGDPHFAQGDGEVNGTALELSLTGQFRFILHKSGKATKPHVEGLAHPLLETPEEW 705 GALFS+GD H+AQGDGEV GTA+E+ T RF + G G+ P+ + P E Sbjct: 226 GALFSVGDAHYAQGDGEVCGTAIEMGATATLRFGVISEGAKKY----GIRFPIFK-PSES 280 Query: 706 ILHGFSYGNYLRELGRNAQSEIYQRSSVDLALRNAFRATRKFLMECYRLSEDEALALISL 765 + F++ ++ G + + + L+ ++A L+E + ++A L S+ Sbjct: 281 SVRRFTHSKHVAVTGVGVIDSLNESENATLSAKHALLNLIN-LLEKAGYTREQAYLLASV 339 Query: 766 GVDFGVTQVAD-GNWGVHAIV 785 D ++Q+ D N+ V A + Sbjct: 340 AADLRLSQLVDVPNFTVTAFL 360 >SSO2810 [C] COG2421 Predicted acetamidase/formamidase Sso Sulfolobus solfataricus Length = 318 Score = 92.4 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 108/403 (26%), Positives = 164/403 (40%), Gaps = 120/403 (29%) Query: 401 AIPPVMSVQSGAVVTIETLTQHAFDDYERMIKGDPGAESVFRWTAEGKSVERRGAGPMDG 460 ++PP++++ G ++T+ET + ++G+ + Sbjct: 16 SLPPILTISDGDIITVET-----------------------KEASDGQVTPSSTEKDLLK 52 Query: 461 SIFGRGAGEGFGVHICTGPIYVCGAEPGDVLEVQILDIWPRPSANPAYAGKSFG-SNAAA 519 F + +H TGPI V GAEPGD LEV+ L+ + K +G + Sbjct: 53 LDFSK-------IHPLTGPIEVKGAEPGDALEVEFLE----------FRHKGWGWTGVLP 95 Query: 520 WWGF----QYNDLIDPPAKRETITIFETDAEAEWARAVYSYRWTPQTDPFG---VRHETM 572 +GF QY ID + + I++ D + +A+ FG V+ Sbjct: 96 GFGFLADEQYTAPID--LQGPALKIWKVDEKYAYAK-------------FGDLNVKVPIY 140 Query: 573 DYPGVPVDHATVEKRSGVLAGVRIPARLHFGFMAVAPRESDIIDSIPPGYFGGNVDNWRA 632 +PGV G +P R + +IPP GGN+D Sbjct: 141 PFPGV--------------IGTGLPFR-------------GKLSTIPPRENGGNMDIKHL 173 Query: 633 TKGTTLYLPVAVPGALFSIGDPHFAQGDGEVNGTALE--LSLTGQFRFILHKSGKATKPH 690 T GT LYLPV V GAL SIGD H AQGDGEV GTA+E + +T + R I + Sbjct: 174 TVGTKLYLPVFVNGALLSIGDTHLAQGDGEVCGTAIEAPMEVTVKVRLIKNV-------- 225 Query: 691 VEGLAHPLLETPEEWILHGFSYGNYLRELGRNAQSEIYQRSSVDLALRNAFRATRKFLME 750 GL PL T + + Y Y+ G +D L NA + K ++ Sbjct: 226 --GLTQPLFVTKK---VKEMEYDEYIAYPG------------IDSNLWNATKKAIKGIIS 268 Query: 751 CYR--LSEDEALALISLGVDFGVTQVAD-GNWGVHAIVRKSML 790 ++ EA L S+ V+ V++V D NW V A + K++ Sbjct: 269 ILSKYMAPVEAYILASVVVNLRVSEVVDVPNWIVTAYLPKNVF 311 >AGl1441 [K] COG2207 AraC-type DNA-binding domain-containing proteins Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 346 Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 92/323 (28%), Positives = 149/323 (46%), Gaps = 25/323 (7%) Query: 13 IPRQNRREVWREALAGLQLDCELPEAGQFQFGELTAKRSTSGGQLALLR--STEQQIVCS 70 +P+++ +WR+++ L D L + F + + G +AL R S+ Q S Sbjct: 20 VPKRDAMGLWRDSINVL-FDARLRSSQDDGF--FASVDAAFIGNVALGRTQSSAQDFDRS 76 Query: 71 -GHAASPGMPARVAIIFHGYGRGSITSGQRSCEFAD-NDVSVCDLQSPWRMTLREDFEIL 128 A GM + Y G S + + E A D+ + D+ P T D + L Sbjct: 77 RNKLARDGMDG---FLLQFYASGKSMSRRGTGETAGPGDLYIIDMAQPL-ATATTDHDHL 132 Query: 129 LLELPRERLLGRL----GHNRLRLPAVLGATIAAASVRPVMRTLGGNFAILDKADLATAE 184 L +PR L GRL H+ LPA L + +R M ++ +F +++ D A Sbjct: 133 SLVVPRRLLEGRLIGSGNHHERVLPAGLPLV---SLLRETMTSIYRHFDVMNANDGAATV 189 Query: 185 VAVTELVAGALLGETRLD-AEAMTQVQAGHLRRVDAAIEAQLGNAGLTIADIARQEGLSQ 243 + EL A+ R D A+ + + +RR I+ L + L++ + + G+S+ Sbjct: 190 SPLLELATAAINNHVREDNAQGVQRALRASIRRY---IDNHLLDPALSVEKVMGEFGVSR 246 Query: 244 RYLQRLFERQNTTFSAYVRERRLERCCNDLIDPNYADQRIAEISYRWGFTDQAHFSRMFS 303 R + RLFE FSA + RRLER + L P + IA+++ +GFT+ +FSR+F Sbjct: 247 RTVYRLFEPLGG-FSACITHRRLERAMDFLRAPQSSHMTIADVAAAYGFTNPENFSRVFK 305 Query: 304 ATYGTSPRDFRK--AVPRDVEGE 324 T+G SPR R + RDV E Sbjct: 306 KTFGLSPRQIRHFASENRDVTSE 328