BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0087.0038.p         (100 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll7060 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium...    84   6e-17
SMa0160 [K] COG1802 Transcriptional regulators Sme Sinorhizobium...    58   6e-09

>mll7060 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 230

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 52/84 (61%)

Query: 6   GNPERFHEVNERFHNAIYAGSQNAYIAEITLATRVRVQPFRRAQFRNLGRLAKSHAEHDR 65
           G  E +   N  FH+ +Y G+ + +I E+T  TR R+ PFRRAQFR  GRLAKS  EHD 
Sbjct: 127 GAEEDYEYFNTEFHSRLYRGAHSTHIQELTATTRSRLAPFRRAQFRLPGRLAKSWQEHDL 186

Query: 66  VVVAIMRGDKTGAAAAMRAHIEQV 89
           +V AIMRGD   A  A R H+  V
Sbjct: 187 IVTAIMRGDSVAAGKAARDHVSIV 210


>SMa0160 [K] COG1802 Transcriptional regulators Sme Sinorhizobium meliloti
          Length = 224

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%)

Query: 9   ERFHEVNERFHNAIYAGSQNAYIAEITLATRVRVQPFRRAQFRNLGRLAKSHAEHDRVVV 68
           +R++  NE FH AIY  S + ++ E       R++P+RR Q R   R+  S  EH  +V 
Sbjct: 122 DRYYYENEIFHRAIYTASHSGFLEEQCTTLHRRLRPYRRLQLRVRNRMKVSFREHGEIVE 181

Query: 69  AIMRGDKTGAAAAMRAHI 86
           AI+ G+  GA   +R+H+
Sbjct: 182 AILSGNTDGAREGLRSHV 199