BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0087.0004.p (335 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0021_1 [M] COG0794 Predicted sugar phosphate isomerase invo... 267 3e-71 AGl2124_1 [M] COG0794 Predicted sugar phosphate isomerase involv... 265 1e-70 mll3023_1 [M] COG0794 Predicted sugar phosphate isomerase involv... 250 3e-66 SMb20830_1 [M] COG0794 Predicted sugar phosphate isomerase invol... 233 6e-61 SMc02268_1 [M] COG0794 Predicted sugar phosphate isomerase invol... 230 4e-60 >BMEII0021_1 [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation Bme Brucella melitensis Length = 245 Score = 267 bits (682), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 130/213 (61%), Positives = 163/213 (76%) Query: 8 MTKSSGPDDGAVQSALRTLDAEASGVAALSAALKSDLGAPFAAASELIGNAKGRLIVTGL 67 +T+ + A+ SALRT+ E +G+ AL AL + L PF A E I ++GRL+VTG+ Sbjct: 32 ITQKLADAEAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGV 91 Query: 68 GKSGHIGRKIAATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGEQPEMRNLIA 127 GKSGHIG K+AATFASTGT AFFVH+ EA+HGDLGMI ++DVILA+SWSGE E++ ++ Sbjct: 92 GKSGHIGSKLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVN 151 Query: 128 YAARFGIPLIAMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMMLALGDALAIA 187 Y+ RF IPLIA+T+ +DS L +AADV L LPKA EACPH LAPTTS++M LA+GDALAIA Sbjct: 152 YSQRFRIPLIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIA 211 Query: 188 LLEGRGFTSTDFSVLHPGGKLGALLKYARDLMH 220 LLE RGFT +DF HPGG LGA L + RD+MH Sbjct: 212 LLEARGFTPSDFKTFHPGGSLGASLIHIRDIMH 244 >AGl2124_1 [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 128/206 (62%), Positives = 162/206 (78%) Query: 15 DDGAVQSALRTLDAEASGVAALSAALKSDLGAPFAAASELIGNAKGRLIVTGLGKSGHIG 74 +D A++SA+RT+ E +G+AAL AL++ L PF A E IG + GRLI+TG+GKSGHIG Sbjct: 10 EDNAIESAVRTISMERAGLAALEDALRNGLSEPFCKAIETIGQSNGRLIITGVGKSGHIG 69 Query: 75 RKIAATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGEQPEMRNLIAYAARFGI 134 K+AATFASTGTPAFFVHAAEA+HGDLGMI DDV+LA+S GE E+R++I Y+ RF I Sbjct: 70 AKLAATFASTGTPAFFVHAAEANHGDLGMIGGDDVVLAISKGGESAELRSIINYSRRFSI 129 Query: 135 PLIAMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMMLALGDALAIALLEGRGF 194 PLIA+T ++S+L++A+D+ L +P +EACP LAPTTS+LM LALGDALA+ALLE R F Sbjct: 130 PLIALTCSENSSLARASDIVLLVPNEQEACPLGLAPTTSTLMQLALGDALAVALLEARNF 189 Query: 195 TSTDFSVLHPGGKLGALLKYARDLMH 220 T+ DF V HPGGKLGA L D+MH Sbjct: 190 TAGDFKVFHPGGKLGASLTLVSDIMH 215 >mll3023_1 [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation Mlo Mesorhizobium loti Length = 213 Score = 250 bits (639), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 128/208 (61%), Positives = 157/208 (75%), Gaps = 6/208 (2%) Query: 5 KPLMTKSSGPDDGAVQSALRTLDAEASGVAALSAALKSDLGAPFAAASELIGNAKGRLIV 64 KPL ++S + SALRT+ E +G+AAL+ AL++ L APFA A ++I +GRLIV Sbjct: 9 KPLDRQAS------IDSALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGRLIV 62 Query: 65 TGLGKSGHIGRKIAATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGEQPEMRN 124 TG+GKSGHIG KIAAT ASTGTPAFFVH EA+HGDLGMI DD I+A+SWSGE EM Sbjct: 63 TGVGKSGHIGSKIAATLASTGTPAFFVHPVEANHGDLGMIAKDDAIIAISWSGESKEMLG 122 Query: 125 LIAYAARFGIPLIAMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMMLALGDAL 184 ++AY+ RF IPLIA+T+ + S L++AADV L LP+ EACPH LAPTTS+L+ L +GDAL Sbjct: 123 IVAYSRRFSIPLIAVTSGETSALARAADVVLLLPRTPEACPHGLAPTTSTLLQLVIGDAL 182 Query: 185 AIALLEGRGFTSTDFSVLHPGGKLGALL 212 AIALLE RGFT F HPGG+LGA L Sbjct: 183 AIALLEARGFTPDHFRTFHPGGQLGANL 210 >SMb20830_1 [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation Sme Sinorhizobium meliloti Length = 221 Score = 233 bits (593), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 112/204 (54%), Positives = 152/204 (74%), Gaps = 2/204 (0%) Query: 19 VQSALRTLDAEASGVAALSAALKSD--LGAPFAAASELIGNAKGRLIVTGLGKSGHIGRK 76 ++S RTL +G+ AL+ L SD A EL+G+ GR++V+G+GKSGHIGRK Sbjct: 18 LESIGRTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDGRVVVSGVGKSGHIGRK 77 Query: 77 IAATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGEQPEMRNLIAYAARFGIPL 136 IAAT ASTGT A+FVH EASHGDLGMIT D ++ LSWSGE E+ N++ YA RF +P+ Sbjct: 78 IAATLASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPI 137 Query: 137 IAMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMMLALGDALAIALLEGRGFTS 196 I+++++++STL++ +++ L LPK EACPH LAPTTS+++ LA+GDALAIALLE RGF++ Sbjct: 138 ISISSNRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSA 197 Query: 197 TDFSVLHPGGKLGALLKYARDLMH 220 DF HPGGKLGA L+ ++L H Sbjct: 198 EDFKAFHPGGKLGAQLRLVQELAH 221 >SMc02268_1 [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation Sme Sinorhizobium meliloti Length = 221 Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/204 (54%), Positives = 150/204 (73%), Gaps = 2/204 (0%) Query: 19 VQSALRTLDAEASGVAALSAALKSD--LGAPFAAASELIGNAKGRLIVTGLGKSGHIGRK 76 ++S RTL +G+ AL+ L SD A EL+G+ GR++V+G+GKSGHIGRK Sbjct: 18 LESIGRTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDGRVVVSGVGKSGHIGRK 77 Query: 77 IAATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGEQPEMRNLIAYAARFGIPL 136 IAAT ASTGT A FVH EASHGDLGMIT D ++ LSWSGE E+ N++ YA RF +P+ Sbjct: 78 IAATLASTGTSAHFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPI 137 Query: 137 IAMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMMLALGDALAIALLEGRGFTS 196 +++ ++++STL++ +++ L LPK EACPH LAPTTS+++ LA+GDALAIALLE RGF++ Sbjct: 138 VSICSNRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSA 197 Query: 197 TDFSVLHPGGKLGALLKYARDLMH 220 DF HPGGKLGA L+ ++L H Sbjct: 198 EDFKTFHPGGKLGAQLRLVQELAH 221