BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0085.0005.p         (175 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DR2459 [R] COG1853 Conserved protein/domain typically associated...    92   5e-19
AGpA322 [R] COG1853 Conserved protein/domain typically associate...    91   2e-18
RSc0763 [R] COG1853 Conserved protein/domain typically associate...    84   2e-16
SMa0793 [R] COG1853 Conserved protein/domain typically associate...    79   7e-15
CC2275 [R] COG1853 Conserved protein/domain typically associated...    78   1e-14

>DR2459 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Dra
           Deinococcus radiodurans
          Length = 186

 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 4/149 (2%)

Query: 7   PASFRAAAARFPTGVTVVASIDRDGTPVGMTANSFTPVSTKPPTVLVSVMRGRTWQAIM- 65
           P  FR    RF +GVT++ + D +    GMTA++F  VS  PP VLVSV R      ++ 
Sbjct: 35  PLEFRQTLGRFASGVTIITAQDGE-QRRGMTASAFVSVSLTPPLVLVSVDRRAHMHGLLA 93

Query: 66  --DSKRYAVNVLHAEDLALCAHFSGGPRAEGSPSLVKREEFPVLSQAIAQFACDVVRSID 123
             +   + VNVL A    L  HF+G P  E S      E  P+L   IAQ  C   + I 
Sbjct: 94  EPEVTHFGVNVLGANQRHLSDHFAGRPGPEESVPWFMHESVPLLGGTIAQLVCRKEQVIA 153

Query: 124 VADHTLFIGEVRWCRQRDGSPLTFYPSRF 152
             DHTL++G V + R  D  PL ++  ++
Sbjct: 154 AGDHTLYMGFVEYSRYTDDDPLLYFRGQY 182


>AGpA322 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 323

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 2   NPHPDPASFRAAAARFPTGVTVVASIDRDGTPVGMTANSFTPVSTKPPTVLVSVMR-GRT 60
           +P  DP + R A   F TGVT+V + D DG P GMTANSFT VS  PP +L+ V +   +
Sbjct: 5   HPAIDPIALRKAFGTFVTGVTIVTTYDADGNPRGMTANSFTSVSLDPPLLLICVGKSAAS 64

Query: 61  WQAIMDSKRYAVNVLHAEDLALCAHFSGGPRAEGSPSLVKREEF--PVLSQAIAQFACDV 118
           ++A   ++ +AVN LH   + +   F+     +       R     P+L+ +++ F C V
Sbjct: 65  YEAFCQTESFAVNFLHEGQVDVSGIFASKTADKFGSVRHHRVHTGAPILADSLSWFDCTV 124

Query: 119 VRSIDVADHTLFIGEVRWCRQRDGSPLTFYPSRFCN 154
              ++  DH + IGEVR       +PL F   R+ +
Sbjct: 125 FNRVEAGDHVILIGEVRAFGTSPQAPLGFCRGRYAS 160


>RSc0763 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Rso Ralstonia
           solanacearum
          Length = 191

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 81/162 (50%), Gaps = 11/162 (6%)

Query: 3   PHPDPASFRAAAARFPTGVTVVASIDRDGTP-----VGMTANSFTPVSTKPPTVLVSV-M 56
           P  D A FR A ++F TGVTVV +    G P     VG+TA+SF  VS +PP VL S+  
Sbjct: 22  PDFDAAHFRRALSQFATGVTVV-TTRSGGAPDQPPFVGVTASSFNSVSLEPPLVLWSLGT 80

Query: 57  RGRTWQAIMDSKRYAVNVLHAEDLALCAHFS--GGPRAEGSPSLVKREEFPVLSQAIAQF 114
           +  ++        Y +NVL A  L LC  F+   G R       +     P+L+Q++A F
Sbjct: 81  QANSFPLFHRGSHYVINVLSASQLDLCKRFATLKGDRFANVDYRLSPTGLPILAQSLAWF 140

Query: 115 ACDVVRSIDVADHTLFIGEVRWCRQRD--GSPLTFYPSRFCN 154
            C      D  DH +F+GEV  C   D  G+PL F+   F +
Sbjct: 141 ECHNRSRYDEGDHVIFVGEVERCGVLDARGAPLVFHRGAFSS 182


>SMa0793 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Sme
           Sinorhizobium meliloti
          Length = 320

 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 14/157 (8%)

Query: 6   DPASFRAAAARFPTGVTVVASIDRDGTPVGMTANSFTPVSTKPPTVLVSVMR-GRTWQAI 64
           DP + R A   F TGVTVV + D  G P+G TANSFT VS  PP +LV + +  R ++++
Sbjct: 16  DPRALRDAFGAFATGVTVVTASDAAGKPIGFTANSFTSVSLDPPLLLVCLAKSSRNYESM 75

Query: 65  MDSKRYAVNVLHAEDLALCAHFSG--GPRAEGSPSLVKREEFPVLSQAIAQFACDVVRSI 122
             + R+A+NVL      +   F+     R       + R+  P+ S   A F C +   I
Sbjct: 76  TSAGRFAINVLSETQKDVSNTFARPVEDRFAAVDWRLGRDGCPIFSDVAAWFECSMQDII 135

Query: 123 DVADHTLFIGEVRWCRQRDGSPLTFYPSRFCNGLGAA 159
           +  DH + IG V           T + +   NGLG A
Sbjct: 136 EAGDHVIIIGRV-----------TAFENSGLNGLGYA 161


>CC2275 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Ccr
           Caulobacter vibrioides
          Length = 174

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 79/151 (52%), Gaps = 4/151 (2%)

Query: 6   DPASFRAAAARFPTGVTVVASIDRDGTPVGMTANSFTPVSTKPPTVLVSV-MRGRTWQAI 64
           D  + R A   F TGVTVV ++  DG  VG+TANSFT VS  PP  L+ V ++  +  A+
Sbjct: 16  DARALRNAFGCFTTGVTVVTTLAPDGRRVGLTANSFTSVSLDPPLALICVDLKSSSLPAL 75

Query: 65  MDSKRYAVNVLHAEDLALCAHF--SGGPRAEGSPSLVKREEFPVLSQAIAQFACDVVRSI 122
             ++++AVNVLHAE   L   F      R  G  +   R   P+L + +A F C+   + 
Sbjct: 76  DAAQKFAVNVLHAEHQQLARQFVQKETDRFAGLETETWRTGVPILPECMANFECETHHAF 135

Query: 123 DVADHTLFIGEVRWCRQR-DGSPLTFYPSRF 152
           D  DH +++G V   R   D  PL +   RF
Sbjct: 136 DAGDHRVYVGRVVKLRYDPDHEPLVYLQGRF 166