BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0084.0007.p         (163 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

slr1406 [R] COG3193 Uncharacterized protein, possibly involved i...    77   2e-14
AGc2067 [R] COG3193 Uncharacterized protein, possibly involved i...    74   2e-13
sll1307 [R] COG3193 Uncharacterized protein, possibly involved i...    64   1e-10

>slr1406 [R] COG3193 Uncharacterized protein, possibly involved in
           utilization of glycolate and propanediol Syn
           Synechocystis
          Length = 181

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 13/143 (9%)

Query: 33  MAMSLAIMQA--ALDQCTKDGYKVSVVIVDKGGNVAASVRGDGTGPHTMEFARMKAYTAR 90
           + +SLA+  A  A++ C +DGY V+  +V++ G V A +RGD   PHT+E +  KA+T  
Sbjct: 37  LPISLAVEAAMEAVNTCQQDGYNVTATVVNREGLVQAVIRGDDATPHTIENSFYKAFTLI 96

Query: 91  T----RSQTSLATMKQMEDPANAFLKQIP----NVVGVG---GGVPIKAGNEVIGGVGVS 139
           T      Q S   + Q   PA   +  +P     + G+    GG  IK G++++  +GVS
Sbjct: 97  TLGPITGQDSTGAIAQKMTPAPLPVGSVPLAPNPITGLSFSTGGSAIKVGDQLVAAIGVS 156

Query: 140 GAPGGEKDEVCANAGLAKVADAL 162
           G+P G  D+ C   G+ K+   L
Sbjct: 157 GSPNGNLDQTCGLKGIEKIKSRL 179


>AGc2067 [R] COG3193 Uncharacterized protein, possibly involved in
           utilization of glycolate and propanediol Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 160

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 4/139 (2%)

Query: 20  ALAQAPLVEKNVSMAMSLAIMQAALDQCTKDGYKVSVVIVDKGGNVAASVRGDGTGPHTM 79
           ALAQ       + + M+    +AAL  C+  G  V+V IV + G     ++ DG+GPHT+
Sbjct: 17  ALAQTLPTAPYLPLDMAEKATKAALQACSAKGNAVTVAIVTRDGATKTVLKADGSGPHTV 76

Query: 80  EFARMKAYTART--RSQTSLATMKQMEDPANAFLKQI-PNVVGVGGGVPIKAGNEVIGGV 136
             A  KA+ A +  R    +A     + PAN  L+ +   +V   GG+PIK G+ ++GG+
Sbjct: 77  PSATGKAFAAASLGRDIGEIAEFIASK-PANDGLRNMDERLVIQAGGLPIKIGDALVGGI 135

Query: 137 GVSGAPGGEKDEVCANAGL 155
           GV GAP G  D  CA  GL
Sbjct: 136 GVGGAPSGAIDAECAREGL 154


>sll1307 [R] COG3193 Uncharacterized protein, possibly involved in
           utilization of glycolate and propanediol Syn
           Synechocystis
          Length = 175

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 28/183 (15%)

Query: 1   MRRFSLALFSSVTVLT--ATPALA--QAPLVEKNVSMAMSLAIMQAALDQCTKDGYKVSV 56
           M +F+     +   LT  A PALA  + P++   +++  +    Q+A+  C ++GY V+ 
Sbjct: 1   MLKFTFTPLLTTIALTGLALPALALEETPVLPAEIAIKAA----QSAIAACRQEGYGVTA 56

Query: 57  VIVDKGGNVAASVRGDGTGPHTMEFARMKAYTART--------RSQTSLATMK------- 101
            +V+  GNV   +R DG   HT++ +  KAY+A T        R+   LA+M+       
Sbjct: 57  TVVNPEGNVLVVIRSDGALVHTVQTSFNKAYSAVTLATNHNLDRTSGILASMQAKGAQGV 116

Query: 102 -QMEDPANAFLKQIPNVVGVGGGVPIKAGNEVIGGVGVSGAPGGEKDEVCANAGLAKVAD 160
                PA+     +  +    GGV + +  +V+GG+GVSG P G  DE CA  G   V  
Sbjct: 117 GTWPMPAD----PLTGITLFPGGVTLISQGKVVGGLGVSGTPIGMVDEGCAIKGRDAVLP 172

Query: 161 ALK 163
            L+
Sbjct: 173 DLR 175