BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0083.0003.p         (153 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll9538 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium...   197   9e-51
CC3169 Non COG                                                        147   1e-35
RSp1377 [K] COG1522 Transcriptional regulators Rso Ralstonia sol...   146   1e-35
mlr1619 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium...   144   5e-35
mll0557 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium...   142   2e-34

>mll9538 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 155

 Score =  197 bits (500), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 93/151 (61%), Positives = 118/151 (78%)

Query: 2   PALDAIDRKILSLLQTDSRMTMQELADKVGLSVSPCHRRVKLLEERGVISRYIATVDQKS 61
           P LDAID KI++ LQ +++ T  +LA+ VGLS SPC RRV+LLE  GVI  Y   +DQK 
Sbjct: 4   PTLDAIDLKIIAALQKNAKATTNDLAEAVGLSPSPCARRVRLLERAGVIKGYTVVLDQKK 63

Query: 62  IGLHVSVFISIKLARQKEEDLNRFARAISKWDEVLECYLMTGNRDYLLRVVAADLSSYEA 121
           +GL +S F SIKL RQ+E+DL+RF++A+ +W EV++CYLMTG RDYL+R+V  DL +YE 
Sbjct: 64  LGLPISAFASIKLERQREDDLDRFSQAVLRWPEVVDCYLMTGQRDYLMRIVVRDLEAYER 123

Query: 122 FLKNKLTRLDGIASIESSFALSQVKYSTALP 152
           F+K+KLTRLD IASIESSFAL QVK S ALP
Sbjct: 124 FIKDKLTRLDNIASIESSFALGQVKRSEALP 154


>CC3169 Non COG
          Length = 201

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 104/150 (69%)

Query: 4   LDAIDRKILSLLQTDSRMTMQELADKVGLSVSPCHRRVKLLEERGVISRYIATVDQKSIG 63
           +DA DR+I+  LQ D R+T QELA++V LS SPC RRV+ LE  GVI+ Y A VDQK+ G
Sbjct: 50  MDAKDRQIIRELQKDGRLTNQELAERVNLSPSPCLRRVRNLEAEGVITGYTALVDQKAYG 109

Query: 64  LHVSVFISIKLARQKEEDLNRFARAISKWDEVLECYLMTGNRDYLLRVVAADLSSYEAFL 123
           L ++VF+ ++L R  ++ +  F  A+++ D++L+C+L+ G  DYLLRV+   L +YE F+
Sbjct: 110 LPITVFVRVRLDRHGQDLIKGFEDAVARIDQILDCFLLAGGDDYLLRVIVDSLEAYEDFM 169

Query: 124 KNKLTRLDGIASIESSFALSQVKYSTALPV 153
           + +L  + GIASI++SFA   VK +   P+
Sbjct: 170 RRRLHAIPGIASIDTSFAYGVVKQTRVFPL 199


>RSp1377 [K] COG1522 Transcriptional regulators Rso Ralstonia solanacearum
          Length = 152

 Score =  146 bits (369), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/150 (49%), Positives = 100/150 (66%)

Query: 4   LDAIDRKILSLLQTDSRMTMQELADKVGLSVSPCHRRVKLLEERGVISRYIATVDQKSIG 63
            DAIDR+ILS LQ D R+   ELA +VGLS SPC RRV+LLEE GVI RY+A ++   +G
Sbjct: 3   FDAIDRRILSALQRDGRLQNIELAKEVGLSPSPCLRRVRLLEEAGVIERYVAVLNPAKVG 62

Query: 64  LHVSVFISIKLARQKEEDLNRFARAISKWDEVLECYLMTGNRDYLLRVVAADLSSYEAFL 123
             +SVF  I L  Q    ++ F  AI +  EV+EC+LM G+ D+LLRVVAADL  Y  F 
Sbjct: 63  KGLSVFARIWLKGQDAATVDAFTAAIQQLPEVVECHLMAGDCDFLLRVVAADLEDYRQFQ 122

Query: 124 KNKLTRLDGIASIESSFALSQVKYSTALPV 153
              LTR+ G+ S+++   + ++K ++ALPV
Sbjct: 123 IQYLTRIPGVQSVKTEVPMQKIKLTSALPV 152


>mlr1619 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 152

 Score =  144 bits (364), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 69/142 (48%), Positives = 98/142 (69%)

Query: 5   DAIDRKILSLLQTDSRMTMQELADKVGLSVSPCHRRVKLLEERGVISRYIATVDQKSIGL 64
           D  D +IL  L+ D+R+T  ELA+++GLS SPC RRV+ LEE GVI  Y   VD  + G 
Sbjct: 7   DDFDLRILRELRDDARITNNELAERIGLSPSPCLRRVRRLEETGVIRGYTTLVDPAAFGW 66

Query: 65  HVSVFISIKLARQKEEDLNRFARAISKWDEVLECYLMTGNRDYLLRVVAADLSSYEAFLK 124
            +    +I+L+RQ E+++  F  AI  WDEVLEC+L+TG+RDY+L+VV  +L  YE F+K
Sbjct: 67  SMVAIATIRLSRQNEDEIVMFEEAIRGWDEVLECHLVTGSRDYVLKVVTGNLEQYERFIK 126

Query: 125 NKLTRLDGIASIESSFALSQVK 146
            K+ RL  +ASIE+SF ++ +K
Sbjct: 127 EKIARLKCVASIETSFVMNTIK 148


>mll0557 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 163

 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 105/150 (70%), Gaps = 1/150 (0%)

Query: 4   LDAIDRKILSLLQTDSRMTMQELADKVGLSVSPCHRRVKLLEERGVISRYIATVDQKSIG 63
           +D +DRKIL LLQ D+ + + ++A KVGLS +PC RR++ LEE GVI R +A +D + + 
Sbjct: 1   MDRLDRKILRLLQEDATLAVADVAKKVGLSTTPCWRRIQKLEEEGVIKRRVAILDHEKVN 60

Query: 64  LHVSVFISIKLARQKEEDLNRFARAISKWDEVLECYLMTGNRDYLLRVVAADLSSYEAFL 123
           + V+VF+SI+      E L RF+  I ++ EV+E Y M+G+ DYLLRVV  D+++Y+AF 
Sbjct: 61  VRVTVFVSIRTNSHSHEWLRRFSEVIQEFPEVVEFYRMSGDVDYLLRVVVPDIAAYDAFY 120

Query: 124 KNKLTRLDGIASIESSFALSQVKYSTALPV 153
           K  + +++ I  + SSFA+ Q+KY+T +P+
Sbjct: 121 KRLIAKIE-IRDVSSSFAMEQIKYTTEIPL 149