BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0083.0001.p (390 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll7369 [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family p... 453 e-127 SMa0247 [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family p... 416 e-116 CC0823 Non COG 411 e-114 AGc4970 [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family p... 410 e-114 YPO1289 [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family p... 392 e-109 >mll7369 [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family protein Mlo Mesorhizobium loti Length = 385 Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust. Identities = 224/388 (57%), Positives = 287/388 (73%), Gaps = 4/388 (1%) Query: 4 LTPKDVLPEDGTAGTLVGRVWLPQAGGPAVVAVRADGVFDVTARF-PTVSALCEESDPAA 62 +T LP+DG +GR P P +V VR VFD+T+ PTV +CE +DPA Sbjct: 1 MTNMTFLPDDGV---FLGRARSPDVPHPLIVTVRDGTVFDITSSAAPTVRDICEMADPAG 57 Query: 63 ALRATRGERIGDFEAILANTPPDGRDKARPHLLAPVDLQVLKAAGVTFAISMLERVIEER 122 +R+ +G+ IG + I AN+ RD A+P+LL+PVDLQ +KA+GVTF +S+LERVIEE+ Sbjct: 58 HVRSAKGKPIGSLDDIAANSFQTSRDPAKPYLLSPVDLQAVKASGVTFVVSLLERVIEEQ 117 Query: 123 ARGNPSSADAIRKEVVRLVGDDLSKLKPGSEQAMKLKQVLIDQNAWSQYLEVGIGPDAEV 182 ARG+ ADAIR ++ L+G DLSKLKPGS +AM++K LI + AWSQYLEVGIGPDAE+ Sbjct: 118 ARGSAEKADAIRADIAGLIGHDLSKLKPGSPEAMEIKAKLIARGAWSQYLEVGIGPDAEI 177 Query: 183 FTKAPTLSSVGSGMDAGLHPKSTWNNPEPEVVLIVSAAGKIVGAALGNDVNLRDFEGRSA 242 FTK ++SVG G D GLHP STWNNPEPE+ +I +++G+IVGA +GNDVNLRD EGRSA Sbjct: 178 FTKCQPMASVGFGADVGLHPVSTWNNPEPEIAMIAASSGRIVGATIGNDVNLRDVEGRSA 237 Query: 243 LLLSKAKDNNASCAIGPLLRLFDQTFSLDDVRKMDVGLTVTGADGFVLEGHSSISKISRD 302 LLL KAKDNNAS ++GP +RLFD TFS+DDV++ V L V G DGF LEG SS+++ISR Sbjct: 238 LLLGKAKDNNASASLGPFIRLFDDTFSIDDVKRAVVRLKVEGEDGFSLEGASSMAEISRS 297 Query: 303 PTDLVAQTIGPVHQYPDGFALFLGTMFAPVKDRDAKGEGFTHKRDDIVTIAAPQLGKLVN 362 P +LVA IGP HQYPDG AL+LGTMF P KDR KG+GFTHK DIVTI++ + G LVN Sbjct: 298 PEELVAAAIGPHHQYPDGLALYLGTMFVPSKDRGEKGKGFTHKVGDIVTISSEKFGALVN 357 Query: 363 RMRGSDECEPWTFGVGALMKNLAQRKVL 390 R+R S +C WT+G LM++LA+ ++ Sbjct: 358 RVRLSPDCPHWTYGASHLMRDLAKADLI 385 >SMa0247 [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family protein Sme Sinorhizobium meliloti Length = 398 Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust. Identities = 218/389 (56%), Positives = 272/389 (69%), Gaps = 9/389 (2%) Query: 3 SLTPKDVLPEDGTAGTLVGRVWLPQAGGPAVVAVRADGVFDVTARFPTVSALCEESDPAA 62 +L+ + + P D ++ LVGRVW AGGP V + VFD+T T+SAL E Sbjct: 12 ALSAESIQPADASSAMLVGRVWSKTAGGPCPVLISEGEVFDLTPLAATISALLEIDGLVD 71 Query: 63 ALR-ATRGERIGDFEAILANTPPDGRDKARPHLLAPVDLQVLKAAGVTFAISMLERVIEE 121 ALR +R +G +A L D LLAP DLQ +KAAGVTFA SMLERVIEE Sbjct: 72 ALRDPSRFASLGSLDAFLRGEAGD--------LLAPADLQAVKAAGVTFADSMLERVIEE 123 Query: 122 RARGNPSSADAIRKEVVRLVGDDLSKLKPGSEQAMKLKQVLIDQNAWSQYLEVGIGPDAE 181 +A+G+P A IR + ++GD+L L GS++A ++K++L + WSQYLEVGIGPDAE Sbjct: 124 QAKGDPLRAQEIRGRLAPVLGDNLKGLVAGSDKAAEVKKLLQELGLWSQYLEVGIGPDAE 183 Query: 182 VFTKAPTLSSVGSGMDAGLHPKSTWNNPEPEVVLIVSAAGKIVGAALGNDVNLRDFEGRS 241 +FTKA +SSVG G G+HPKS WNNPEPEVVL V++ GKIVGA LGNDVNLRDFEGRS Sbjct: 184 IFTKAQPMSSVGCGAYIGIHPKSDWNNPEPEVVLAVTSKGKIVGATLGNDVNLRDFEGRS 243 Query: 242 ALLLSKAKDNNASCAIGPLLRLFDQTFSLDDVRKMDVGLTVTGADGFVLEGHSSISKISR 301 ALLLSKAKDNNASC+IGP +RLFD F+++DV++ +V L V G +GF + G S +S ISR Sbjct: 244 ALLLSKAKDNNASCSIGPFIRLFDGAFTIEDVKQAEVSLVVDGKEGFKMTGISPMSAISR 303 Query: 302 DPTDLVAQTIGPVHQYPDGFALFLGTMFAPVKDRDAKGEGFTHKRDDIVTIAAPQLGKLV 361 P DLV+Q + HQYPDG FLGTMFAPVKDR G GFTH+ D V I+ P+LG+LV Sbjct: 304 SPEDLVSQLLNDNHQYPDGVVFFLGTMFAPVKDRRGTGLGFTHEIGDRVEISTPRLGRLV 363 Query: 362 NRMRGSDECEPWTFGVGALMKNLAQRKVL 390 N + SD C W+FG+GALMKNLA+R +L Sbjct: 364 NWVDHSDRCPKWSFGLGALMKNLAERGLL 392 >CC0823 Non COG Length = 442 Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/384 (58%), Positives = 264/384 (68%), Gaps = 5/384 (1%) Query: 8 DVLPEDGTAGTLVGRVWLPQAGGPAVVAVRADGVFDVTARFPTVSALCEESDPAAALRAT 67 + LPED A TL+GR+ + GP V VR V DV+ PTV+ L P A + Sbjct: 63 EFLPEDWKAATLLGRIDFGE--GPTPVLVRGGRVEDVSKIAPTVADLMNAFQPGAVI--P 118 Query: 68 RGERIGDFEAILANTPPDGRDKARP-HLLAPVDLQVLKAAGVTFAISMLERVIEERARGN 126 RGE G EA+ + D A P LLAPVDLQ LKAAGVTFA+S LERVIEERARG+ Sbjct: 119 RGEDKGPLEALDIRPVWEDPDGAAPVKLLAPVDLQCLKAAGVTFAVSTLERVIEERARGD 178 Query: 127 PSSADAIRKEVVRLVGDDLSKLKPGSEQAMKLKQVLIDQNAWSQYLEVGIGPDAEVFTKA 186 A IR + +G DL ++PGS+ A +LK LI WSQYLEV IGPDAE+FTK Sbjct: 179 AGEALKIRTLLAERMGGDLKSVEPGSQGAQRLKDALIADGLWSQYLEVAIGPDAEIFTKG 238 Query: 187 PTLSSVGSGMDAGLHPKSTWNNPEPEVVLIVSAAGKIVGAALGNDVNLRDFEGRSALLLS 246 PTLSS+G G G+ S WNNPEPEVVL+ +G I GAALGNDVNLRDFEGRSALLLS Sbjct: 239 PTLSSMGWGDQVGVRYDSHWNNPEPEVVLLCDGSGLIRGAALGNDVNLRDFEGRSALLLS 298 Query: 247 KAKDNNASCAIGPLLRLFDQTFSLDDVRKMDVGLTVTGADGFVLEGHSSISKISRDPTDL 306 KAKDNNASCAIGP RLFD+TF LDDVR +V L +TG D FVL+G S++S ISRDP L Sbjct: 299 KAKDNNASCAIGPFFRLFDETFGLDDVRSAEVELKITGRDNFVLDGKSNMSLISRDPAVL 358 Query: 307 VAQTIGPVHQYPDGFALFLGTMFAPVKDRDAKGEGFTHKRDDIVTIAAPQLGKLVNRMRG 366 Q G HQYPDGFALFLGTMFAP++DRD G+GFTHK D V ++ P+LG L N + Sbjct: 359 AGQAYGKQHQYPDGFALFLGTMFAPIQDRDTPGQGFTHKVGDRVRVSTPKLGVLENEVTT 418 Query: 367 SDECEPWTFGVGALMKNLAQRKVL 390 D+ +PWTFG+ AL++NLA R +L Sbjct: 419 CDKAKPWTFGISALIRNLAGRGLL 442 >AGc4970 [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 386 Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust. Identities = 209/389 (53%), Positives = 270/389 (69%), Gaps = 9/389 (2%) Query: 3 SLTPKDVLPEDGTAGTLVGRVWLPQAGGPAVVAVRADGVFDVTARFPTVSALCEESDPAA 62 S+ +LP+D LVGRVW GGP V ++ ++D+T+ PT+S L E++D Sbjct: 6 SIDATAILPDDFENALLVGRVWSKSEGGPCPVLLKGGVLYDLTSLSPTMSELLEKTDLVE 65 Query: 63 ALRATRG-ERIGDFEAILANTPPDGRDKARPHLLAPVDLQVLKAAGVTFAISMLERVIEE 121 L T +G +A L D + LLAP D+Q +KAAGVTFA SMLERVIEE Sbjct: 66 QLAVTSTFVALGALDAFL--------DGSAGELLAPNDIQAVKAAGVTFADSMLERVIEE 117 Query: 122 RARGNPSSADAIRKEVVRLVGDDLSKLKPGSEQAMKLKQVLIDQNAWSQYLEVGIGPDAE 181 +A+G+P A IR + ++GD+L L+ GSE+A ++K++L + WSQYLEVGIGPDAE Sbjct: 118 QAKGDPLRAQEIRGRLAPVLGDNLKGLEAGSEKAAEVKKLLQEMGLWSQYLEVGIGPDAE 177 Query: 182 VFTKAPTLSSVGSGMDAGLHPKSTWNNPEPEVVLIVSAAGKIVGAALGNDVNLRDFEGRS 241 +F+KA ++SVG G G+HPKS WNNPEPEVVL +++ G+IVGA LGNDVNLRDFEGRS Sbjct: 178 IFSKAQAMASVGCGALIGVHPKSQWNNPEPEVVLAIASDGRIVGATLGNDVNLRDFEGRS 237 Query: 242 ALLLSKAKDNNASCAIGPLLRLFDQTFSLDDVRKMDVGLTVTGADGFVLEGHSSISKISR 301 ALLLSKAKDNNASCAIGP +RLFD F+++DV+K + L V G DGF + G S++ ISR Sbjct: 238 ALLLSKAKDNNASCAIGPFIRLFDGNFTIEDVKKSQISLLVEGEDGFTMTGVSAMQAISR 297 Query: 302 DPTDLVAQTIGPVHQYPDGFALFLGTMFAPVKDRDAKGEGFTHKRDDIVTIAAPQLGKLV 361 P +L +Q + HQYPDG FLGTMFAPVKDR G GFTH + D V I+ P+LGKL+ Sbjct: 298 TPENLASQLLNRNHQYPDGAVFFLGTMFAPVKDRHGPGLGFTHSKGDRVEISTPKLGKLI 357 Query: 362 NRMRGSDECEPWTFGVGALMKNLAQRKVL 390 N + +DEC WTFG ALM+NLA+R +L Sbjct: 358 NWVTTTDECPEWTFGTVALMRNLAKRGLL 386 >YPO1289 [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family protein Ype Yersinia pestis Length = 380 Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/382 (52%), Positives = 257/382 (67%), Gaps = 2/382 (0%) Query: 9 VLPEDGTAGTLVGRVWLPQAGGPAVVAVRADGVFDVTARFPTVSALCEESDPAAALRATR 68 +LP T LVGRVW P G P+VV VR ++D+T +++ E+ P+ Sbjct: 1 MLPTSLTKAKLVGRVWRPGIG-PSVVIVRNHILYDITEAVISMADFLEDH-PSERFTMLT 58 Query: 69 GERIGDFEAILANTPPDGRDKARPHLLAPVDLQVLKAAGVTFAISMLERVIEERARGNPS 128 GE +G + ++ G RP LLAP D Q LKA GVTFA SM+ERVI+ER G+P Sbjct: 59 GEPLGTIDDLILPPAEMGYHSTRPCLLAPCDFQALKACGVTFAQSMVERVIDERTAGDPD 118 Query: 129 SADAIRKEVVRLVGDDLSKLKPGSEQAMKLKQVLIDQNAWSQYLEVGIGPDAEVFTKAPT 188 ADA+R+ + ++G L+ ++ GS+QA K+K LI + WSQYLEVGIGPDAE+FTK+ Sbjct: 119 RADALRQRIGAVIGSSLNNIQAGSDQAAKVKAALIAEGLWSQYLEVGIGPDAEIFTKSQP 178 Query: 189 LSSVGSGMDAGLHPKSTWNNPEPEVVLIVSAAGKIVGAALGNDVNLRDFEGRSALLLSKA 248 +S+VG G G++ S W+N EPEVVL V + I GA LGNDVNLRD EGRSALLL +A Sbjct: 179 MSAVGYGAQIGVNRISAWSNSEPEVVLAVDSQSNIRGATLGNDVNLRDIEGRSALLLGQA 238 Query: 249 KDNNASCAIGPLLRLFDQTFSLDDVRKMDVGLTVTGADGFVLEGHSSISKISRDPTDLVA 308 KDNNA+CAIGP +RLFD+ F+L D+ + LTVTGADGF L G S++++ISR PTDLV Sbjct: 239 KDNNAACAIGPFIRLFDENFTLHDIEHASLTLTVTGADGFNLSGSSNMAEISRRPTDLVR 298 Query: 309 QTIGPVHQYPDGFALFLGTMFAPVKDRDAKGEGFTHKRDDIVTIAAPQLGKLVNRMRGSD 368 QT HQYPDGF LFLGT+FAP +DR + GFTH+ D+V I+ P LG L N + SD Sbjct: 299 QTCNTSHQYPDGFMLFLGTLFAPTQDRAQQNAGFTHQPGDLVEISTPLLGTLHNTVVYSD 358 Query: 369 ECEPWTFGVGALMKNLAQRKVL 390 E PWT+G ALM+NL +R VL Sbjct: 359 EAVPWTYGTRALMRNLTKRGVL 380