BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0002.p (450 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO3640 [S] COG4222 Uncharacterized protein conserved in bacteri... 567 e-161 AGc2125 [S] COG4222 Uncharacterized protein conserved in bacteri... 498 e-140 SMc00620 [S] COG4222 Uncharacterized protein conserved in bacter... 488 e-137 Cj0728 [S] COG4222 Uncharacterized protein conserved in bacteria... 435 e-122 DRB0111_3 [S] COG4222 Uncharacterized protein conserved in bacte... 129 1e-29 >YPO3640 [S] COG4222 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 448 Score = 567 bits (1461), Expect = e-161, Method: Compositional matrix adjust. Identities = 277/447 (61%), Positives = 335/447 (74%), Gaps = 6/447 (1%) Query: 1 MRLSLLCSVASILLATSAFAQSEGEFPATLAGHAVMPAESFIDAPADTPNDLKTSGKYTT 60 RL LL S SI +TS++AQ+ E PA LAGHAV+P +S + P+D P DL+ SGKYT+ Sbjct: 6 FRLVLLAS--SIAFSTSSWAQAV-EVPAVLAGHAVLPVKSTVATPSDAPTDLQQSGKYTS 62 Query: 61 GKRVDAIGTVMGKSYERPTGVSLPFKGQPLQGHSGIKVMPDGSFWVITDNGMGSRYNSAD 120 G+RV A+G+V KS +R TG+ LP GQPLQGHSGIK MPDG++WV+TDNG GS+ NS D Sbjct: 63 GQRVSALGSVAAKSADRLTGIGLPISGQPLQGHSGIKHMPDGTYWVLTDNGFGSKANSPD 122 Query: 121 SMLYLNRHKIDWANGKIERQETVFLHDPDRKVPFRIVHEDTAKRYLTGADFDTEGFQIIN 180 +MLYLN + ID+ NG + +TVFLHDPD+KVPF I++E T KRYLTG+DFD E FQ + Sbjct: 123 AMLYLNHYNIDFKNGNVTPLQTVFLHDPDKKVPFHIINESTEKRYLTGSDFDPESFQFAD 182 Query: 181 DIFWIGDEFGPYILKADKTGKILAVFETVADGKPVRSPDHWAVQSPGAPGASYTNVNLRR 240 D WIGDEFGPY++KAD GK+LAVFET DG V+SPD+ + PGAP N + R Sbjct: 183 DALWIGDEFGPYLIKADLNGKVLAVFETQVDGNVVKSPDNPTLTLPGAPDGK-QNFQVAR 241 Query: 241 SKGYEGFASSKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQY 300 SKG+EG A S DG LY +LEG LWD +K +E +DGK R+LEFDV + +TGR WQY Sbjct: 242 SKGFEGMAVSPDGSKLYPMLEGALWDGEK--FENIDGKRYLRVLEFDVKNQAWTGRSWQY 299 Query: 301 VFEQNGNAIGDFNMIDPAQGLVIERDNGEGTADKACPQGQRGENCFPDLAKFKRVYKIEL 360 V E N NAIGDFN+ID GLVIERDNGEGTADKAC G + CF +AKFKRVYKI Sbjct: 300 VLEDNQNAIGDFNLIDANHGLVIERDNGEGTADKACAAGAPTDKCFSQIAKFKRVYKIAF 359 Query: 361 SDANVGKPVRKIAHIDLMKIRDPNKKARKPLNDGVYTFPFFTIENVDRVDETHIIVGNDN 420 SD NVGKPV K+++IDL+ I+DP ARKPLN+GV TFPFFTIENVD VD +HIIVGNDN Sbjct: 360 SDDNVGKPVEKVSYIDLLNIKDPQNLARKPLNNGVLTFPFFTIENVDVVDASHIIVGNDN 419 Query: 421 NLPFSSSRDPNKADDDEFVLLEVGDFL 447 N PFSSSR PN+ADD+EF+LL+V L Sbjct: 420 NFPFSSSRQPNEADDNEFILLDVKALL 446 >AGc2125 [S] COG4222 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 492 Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust. Identities = 258/453 (56%), Positives = 310/453 (68%), Gaps = 4/453 (0%) Query: 1 MRLSLLCSVASILLATSAFAQSEGEFPATLAGHAVMPAESFIDAPADTPNDLKTSGKYTT 60 M+ L S A + A+ + A +E EFPA L HA++PA + I AP D P LKTS K+TT Sbjct: 41 MKHILFASCAILAFASISHA-AEQEFPAKLVSHAILPANTIIPAPTDAPEHLKTSAKFTT 99 Query: 61 G--KRVDAIGTVMGKSYERPTGVSLPFKGQPLQGHSGIKVMPDGSFWVITDNGMGSRYNS 118 KR + +GTV GK R TG+S+PF GQP+QG SGIK MPDGSFW ++DNG GS+ NS Sbjct: 100 ADRKRAEGLGTVPGKDGVRLTGLSMPFNGQPMQGFSGIKAMPDGSFWSLSDNGFGSKLNS 159 Query: 119 ADSMLYLNRHKIDWANGKIERQETVFLHDPDRKVPFRIVHEDTAKRYLTGADFDTEGFQI 178 +D+ML L+ K DW GK+ ETVFL DPD K PF IV E ++KRYLTGADFD E Q Sbjct: 160 SDAMLMLHHLKFDWDAGKVNALETVFLSDPDMKAPFPIVLEGSSKRYLTGADFDVESIQP 219 Query: 179 INDIFWIGDEFGPYILKADKTGKILAVFETVADGKPVRSPDHWAVQSPGAPGASYTNVNL 238 + D FW+G+EFGPYILK + GK+ V T A V+SPDH + PG P NL Sbjct: 220 VADGFWVGEEFGPYILKFTRDGKLTDVISTKAGDIEVKSPDHPTLALPGNPTQKMPAFNL 279 Query: 239 RRSKGYEGFASSKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYW 298 +RS GYEG A SKDG LYGLLEGPL+ AD + + DG A RI+E D A +++TGR W Sbjct: 280 KRSGGYEGMALSKDGSKLYGLLEGPLYMADGQVEKTEDGATALRIIELDTAKKEWTGRTW 339 Query: 299 QYVFEQNGNAIGDFNMIDPAQGLVIERDNGEGTADKACPQGQRGE-NCFPDLAKFKRVYK 357 Y Q G AIGDFNM+D + LVIERDNG GTADKAC ++ E NCF AK KR+YK Sbjct: 340 LYPLAQGGEAIGDFNMLDDSTALVIERDNGAGTADKACADPKKPEANCFALPAKVKRIYK 399 Query: 358 IELSDANVGKPVRKIAHIDLMKIRDPNKKARKPLNDGVYTFPFFTIENVDRVDETHIIVG 417 IE +DA VGK RKI +IDL+KI DP+ K R+ +G Y PF TIENVDRVD THIIVG Sbjct: 400 IEFNDAKVGKAARKIGYIDLLKISDPDNKKRQGGGNGYYDMPFVTIENVDRVDATHIIVG 459 Query: 418 NDNNLPFSSSRDPNKADDDEFVLLEVGDFLKAK 450 NDNNLPFS+ R +KADD+EFVLLEV D L AK Sbjct: 460 NDNNLPFSAGRALDKADDNEFVLLEVKDLLDAK 492 >SMc00620 [S] COG4222 Uncharacterized protein conserved in bacteria Sme Sinorhizobium meliloti Length = 452 Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust. Identities = 245/438 (55%), Positives = 306/438 (69%), Gaps = 4/438 (0%) Query: 16 TSAFAQSEGEFPATLAGHAVMPAESFIDAPADTPNDLKTSGKYTTG--KRVDAIGTVMGK 73 +SA E FPA L HA++PA + + APAD + LKTSGK++T KR +G+V GK Sbjct: 16 SSAALAEEKAFPARLEAHAILPANTIVAAPADAADYLKTSGKFSTADRKRAAELGSVAGK 75 Query: 74 SYERPTGVSLPFKGQPLQGHSGIKVMPDGSFWVITDNGMGSRYNSADSMLYLNRHKIDWA 133 RPTG+SLPF GQP+QG SGIK M DG+FW ++DNG G++ NS D+ML L+ KIDW Sbjct: 76 DGVRPTGLSLPFNGQPMQGFSGIKAMEDGTFWSLSDNGFGNKLNSTDAMLMLHHLKIDWD 135 Query: 134 NGKIERQETVFLHDPDRKVPFRIVHEDTAKRYLTGADFDTEGFQIINDIFWIGDEFGPYI 193 G++E +T+FL DP+RK PF IV E +A RYLTG DFD E Q + D FW+G+EFGPYI Sbjct: 136 AGRVEALKTLFLSDPERKTPFPIVMEGSATRYLTGGDFDVESIQPVADGFWVGEEFGPYI 195 Query: 194 LKADKTGKILAVFETVADGKPVRSPDHWAVQSPGAPGASYTNVNLRRSKGYEGFASSKDG 253 LK D GK+ V TV GKPV SPD+ A+ P + NL+RS GYEG A SKDG Sbjct: 196 LKFDLDGKLTDVIATVVGGKPVLSPDNPALTLQADPSKKAPDFNLKRSGGYEGLALSKDG 255 Query: 254 KFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQYVFEQNGNAIGDFN 313 LYGLLEGP+W AD + E+ +G+ A RI+E D ++ +TGR W Y + G AIGDFN Sbjct: 256 SKLYGLLEGPIW-ADSESVEEAEGRRALRIVELDAGSKAWTGRSWLYPLAEGGEAIGDFN 314 Query: 314 MIDPAQGLVIERDNGEGTADKACPQGQRGE-NCFPDLAKFKRVYKIELSDANVGKPVRKI 372 M+D LVIERDNG GT DKAC + + +CF +K KRVYKI + D NVGK VRKI Sbjct: 315 MLDEKTALVIERDNGAGTVDKACADPKNPQPDCFAVGSKLKRVYKIAMDDENVGKAVRKI 374 Query: 373 AHIDLMKIRDPNKKARKPLNDGVYTFPFFTIENVDRVDETHIIVGNDNNLPFSSSRDPNK 432 ++DL+KI DP+ + R+ +G Y PF TIENVDRVDETHIIVGNDNNLPFS+ R +K Sbjct: 375 GYVDLLKIADPDNRKRQGGGEGYYDMPFVTIENVDRVDETHIIVGNDNNLPFSAGRSLDK 434 Query: 433 ADDDEFVLLEVGDFLKAK 450 ADD+EFVLLEVG+FLKA+ Sbjct: 435 ADDNEFVLLEVGEFLKAE 452 >Cj0728 [S] COG4222 Uncharacterized protein conserved in bacteria Cje Campylobacter jejuni Length = 441 Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust. Identities = 218/443 (49%), Positives = 298/443 (67%), Gaps = 8/443 (1%) Query: 9 VASILLATSAFAQSEGEFPATLAGHAVMPAESFIDAPADTPNDLKTSGKYTTGKRVDAIG 68 + S +L + F E E A LAGH ++ ++S + P D P+ KT GK+ R + IG Sbjct: 6 LTSAMLCSVLFGVQEYE--ANLAGHIIIDSKSTVKPPKDAPDFFKTYGKFANIAREEKIG 63 Query: 69 TVMGKSYERPTGVSLPFKGQPLQGHSGIKVMPDGS-FWVITDNGMGSRYNSADSMLYLNR 127 T K R T LPFK QP+QGHSGIK +P FWVI+DNG+G +YNS D+MLY + Sbjct: 64 TFKSKG-NRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVISDNGLGKKYNSYDAMLYAHE 122 Query: 128 HKIDWANGKIERQETVFLHDPDRKVPFRIVHEDTAKRYLTGADFDTEGFQIINDIFWIGD 187 K D+ N K E +TVF D D+K P+ I E T +RYL+G DFDTE Q+IND F+IGD Sbjct: 123 FKFDFKNSKYELLKTVFFKDSDKKYPYPITTETTKERYLSGVDFDTESIQVINDEFYIGD 182 Query: 188 EFGPYILKADKTGKILAVFETVADGKPVRSPDHWAVQSPGAPGASYTNVNLRRSKGYEGF 247 EFGPY+L DK G + VF+ +GK + SPD+ +++ P N++RSKG+E Sbjct: 183 EFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSLKFSDKPDGENEKFNIKRSKGFEAM 242 Query: 248 ASSKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQYVFEQNGN 307 ASSKDG LY LLEG +++ + + EK GKE RI+EF+V +KFTG+ ++Y E + Sbjct: 243 ASSKDGSKLYLLLEGSIYNNNAYENEK--GKEYLRIIEFNVKNKKFTGKTYKYFLEDKSH 300 Query: 308 AIGDFNMIDPAQGLVIERDNGEGTADKACPQGQRGENCFPDLAKFKRVYKIELSDANVGK 367 +IGDFNMID G++IERD EGT DKAC +G+ ++CF ++A+FKR+YK++L D Sbjct: 301 SIGDFNMIDDKYGIIIERDQKEGTKDKACKEGEDTKHCFNNVAQFKRIYKVKLDDKT--H 358 Query: 368 PVRKIAHIDLMKIRDPNKKARKPLNDGVYTFPFFTIENVDRVDETHIIVGNDNNLPFSSS 427 +KI++IDL+ I+D NK ++KPL + + FPF TIE VD VD++HI+V NDNN P+SSS Sbjct: 359 EAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFETIEGVDIVDDSHIVVENDNNFPYSSS 418 Query: 428 RDPNKADDDEFVLLEVGDFLKAK 450 R+PNK DD+EF+LLEV DFLK+K Sbjct: 419 REPNKTDDNEFILLEVKDFLKSK 441 >DRB0111_3 [S] COG4222 Uncharacterized protein conserved in bacteria Dra Deinococcus radiodurans Length = 214 Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 120/240 (50%), Gaps = 44/240 (18%) Query: 215 VRSPDHWAVQSPGAPGASYTNVNLRRSKGYEGFASSKDGKFLYGLLEGPLWDADKKDWEK 274 VRSP H A A G S NL S G+EGFA + GK YGLLE + Sbjct: 7 VRSPQHPAF----AQGLSSAAANLPASGGFEGFAIAPGGKLAYGLLE-----------KT 51 Query: 275 VDGKEAS--RILEFDVAAEKFTGRYW----QYVFEQNGNAIGDFNMIDPAQGLVIERDNG 328 V G A R++ +D+ R+W +YV EQ G AIGD ++ +Q LVIERDNG Sbjct: 52 VAGDPAGQLRLMRYDLGT-----RHWALAGRYVLEQGGEAIGDLTPVNDSQMLVIERDNG 106 Query: 329 EGTADKACPQGQRGENCFPDLAKFKRVYKIELSDANVGKPVRKIAHIDLMKIRDPNKKAR 388 +G + AKFKR+Y I+L+ N +RK DLM + DP A Sbjct: 107 QG-----------------ETAKFKRLYLIDLAAKNADGTLRKTLVADLMALADPRGLAP 149 Query: 389 KPLNDGVYTFPFFTIENVDRVDETHIIVGNDNNLPFSSSRDPNKADDDEFVLLEVGDFLK 448 GV++FP+FTIENV + ++V NDNN P + R + D EF+ +++ LK Sbjct: 150 S-TRGGVFSFPYFTIENVLVLGPDTLLVANDNNYPATGGRGADVKDQTEFLWIKLPTALK 208