BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0080.0061.p         (230 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGpT188_2 [KL] COG4646 DNA methylase Atu Agrobacterium tumefacie...   365   e-101
mll9333_2 Non COG                                                     345   4e-95

>AGpT188_2 [KL] COG4646 DNA methylase Atu Agrobacterium tumefaciens strain C58
           (Cereon)
          Length = 1315

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/231 (77%), Positives = 199/231 (86%), Gaps = 1/231 (0%)

Query: 1   MQILSGLPVAVTVRKGRSAAGVPEKHARIIQKLIPIRDAVREVLKCQELDLPWKDAQVRL 60
           MQ++ G PVAV VRKGR+A G+PEKH RII+KLI +RDAVR VLK QELD PWKD QVRL
Sbjct: 95  MQVIDGEPVAVKVRKGRNADGIPEKHVRIIRKLISVRDAVRVVLKAQELDQPWKDLQVRL 154

Query: 61  RIAWSNFVRAFGPINTTIVSTAED-ETGEVRETHRRPNLQPFLDDPDCWLVASIEDDDLE 119
           RIAWS+FVR FGPIN T VS  ED ETG+ RE+HRRPNLQPF DDPDCWLVASIED DLE
Sbjct: 155 RIAWSSFVRDFGPINHTTVSITEDPETGKTRESHRRPNLQPFADDPDCWLVASIEDYDLE 214

Query: 120 SDTAKPGPIFTERVIAPPAPPVITSATDALAVVLNERGLVDPDHIAELVHRDADDVIAEL 179
           +DTA+PGPIFT+RVI+PPAPPVITSA DALAVVLNERG VD DHIAEL+HRD +DV+ EL
Sbjct: 215 NDTARPGPIFTDRVISPPAPPVITSAADALAVVLNERGHVDRDHIAELLHRDPEDVVTEL 274

Query: 180 GSAIFHDPSGGSWQTADAYLSGAVRDKLKVAEAAAALDPAYARNVTALREV 230
           GSAIF DP+ GSWQ ADAYLSG VR+KLKVA+AAA LDPAY RNV+AL  V
Sbjct: 275 GSAIFRDPADGSWQMADAYLSGHVREKLKVADAAAGLDPAYERNVSALTAV 325


>mll9333_2 Non COG
          Length = 636

 Score =  345 bits (886), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 183/231 (79%), Positives = 199/231 (86%), Gaps = 1/231 (0%)

Query: 1   MQILSGLPVAVTVRKGRSAAGVPEKHARIIQKLIPIRDAVREVLKCQELDLPWKDAQVRL 60
           +Q++ G  V +TVRKG ++ GVPEKHARII+KLIPIRDAVREVLK QE D PWK AQVRL
Sbjct: 94  VQMIDGAAVTITVRKGGASEGVPEKHARIIRKLIPIRDAVREVLKAQEFDRPWKPAQVRL 153

Query: 61  RIAWSNFVRAFGPINTTIVSTAED-ETGEVRETHRRPNLQPFLDDPDCWLVASIEDDDLE 119
           RIAWSNFVR FGPINTT+VST+ED ETGEVRE HRRPNLQPFLDDPDCWLVASIED DLE
Sbjct: 154 RIAWSNFVRDFGPINTTVVSTSEDAETGEVREVHRRPNLQPFLDDPDCWLVASIEDYDLE 213

Query: 120 SDTAKPGPIFTERVIAPPAPPVITSATDALAVVLNERGLVDPDHIAELVHRDADDVIAEL 179
           ++TA+PGPIFTERVIAPPA P+ITSA DALAVVLNERG VD DHIAEL+H D DDVI EL
Sbjct: 214 TNTARPGPIFTERVIAPPAAPIITSAADALAVVLNERGHVDVDHIAELLHGDVDDVIDEL 273

Query: 180 GSAIFHDPSGGSWQTADAYLSGAVRDKLKVAEAAAALDPAYARNVTALREV 230
           G AIF DP  GSW TADAYLSG VRDKLK A+AAAALDP + RNV AL EV
Sbjct: 274 GDAIFRDPETGSWHTADAYLSGQVRDKLKAAKAAAALDPVFERNVRALVEV 324