BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0079.0005.p         (137 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr6414 [C] COG2010 Cytochrome c, mono- and diheme variants Mlo ...   125   4e-29
BMEI1566 [C] COG2010 Cytochrome c, mono- and diheme variants Bme...   124   5e-29
AGc2829 [C] COG2010 Cytochrome c, mono- and diheme variants Atu ...   124   6e-29
mll6628 [C] COG2010 Cytochrome c, mono- and diheme variants Mlo ...   122   2e-28
CC1404 Non COG                                                        120   9e-28

>mlr6414 [C] COG2010 Cytochrome c, mono- and diheme variants Mlo
           Mesorhizobium loti
          Length = 287

 Score =  125 bits (313), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/137 (49%), Positives = 82/137 (59%), Gaps = 4/137 (2%)

Query: 2   QTIQFGAR-SGHAKTHEGQMLAFGRDGVLKKDEIVTVANYVRSLSGLSTAPKFDAAAGKK 60
           QTI  G R +    T + +M  FG   ++  ++I  V  YV SLSG           G K
Sbjct: 154 QTIAHGIRFASDPDTRQSEMPPFGD--IITPEQIAQVGAYVASLSGKVQDASL-IEPGAK 210

Query: 61  LFTENCTSCHGDNGKGNPELGAPNLTDQIWLYGSDEGALVETITNGRAGVMPAWVGRLDP 120
           +F ENC +CHGDN KGN ELGAPNLTD IWLY   E A+   +   + GVMPAW+GRL  
Sbjct: 211 VFGENCVACHGDNAKGNKELGAPNLTDAIWLYAPGETAIAVQVRAPKHGVMPAWIGRLGE 270

Query: 121 VTVKALAVYVHSLGGGK 137
             VK LAVYVHSLGGG+
Sbjct: 271 TKVKELAVYVHSLGGGE 287


>BMEI1566 [C] COG2010 Cytochrome c, mono- and diheme variants Bme Brucella
           melitensis
          Length = 299

 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 85/136 (62%), Gaps = 4/136 (2%)

Query: 3   TIQFGARS-GHAKTHEGQMLAFGRDGVLKKDEIVTVANYVRSLSGLSTAPKFDAAAGKKL 61
           TI+ G RS    +T   +M AF    VL+  +I  VA YV SLSG    P      G+K+
Sbjct: 167 TIRHGVRSPDDPETRLSEMTAFA--DVLEPQQIRDVAAYVVSLSGTPHDPSM-VPEGQKV 223

Query: 62  FTENCTSCHGDNGKGNPELGAPNLTDQIWLYGSDEGALVETITNGRAGVMPAWVGRLDPV 121
           F ENC  CHG + KG  E GAPNLTD IWLYGS E A++  +++ + GVMPAW  RL   
Sbjct: 224 FAENCAVCHGADAKGLREFGAPNLTDAIWLYGSGEDAIIRQVSHPKHGVMPAWEARLGDA 283

Query: 122 TVKALAVYVHSLGGGK 137
           TVK LA++VHSLGGG+
Sbjct: 284 TVKQLAIFVHSLGGGE 299


>AGc2829 [C] COG2010 Cytochrome c, mono- and diheme variants Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 287

 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 85/136 (62%), Gaps = 4/136 (2%)

Query: 3   TIQFGAR-SGHAKTHEGQMLAFGRDGVLKKDEIVTVANYVRSLSGLSTAPKFDAAAGKKL 61
           T++ G R +  A T   +M AFG   +LK DEI  VA YV SL+G  + P      GK+L
Sbjct: 155 TVKHGIRFADDADTRASEMPAFGD--ILKSDEIRAVAAYVVSLTGTPSNPAL-VEPGKQL 211

Query: 62  FTENCTSCHGDNGKGNPELGAPNLTDQIWLYGSDEGALVETITNGRAGVMPAWVGRLDPV 121
           F +NC SCHG++ KGN E GAPNL D IWL    E  +V  I + + GVMPAW  RL   
Sbjct: 212 FADNCASCHGEDAKGNREFGAPNLADAIWLKAHGEEGIVAQIRSPKHGVMPAWGERLGDT 271

Query: 122 TVKALAVYVHSLGGGK 137
           TVK LA++VHSLGGG+
Sbjct: 272 TVKQLAIFVHSLGGGE 287


>mll6628 [C] COG2010 Cytochrome c, mono- and diheme variants Mlo
           Mesorhizobium loti
          Length = 287

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/137 (48%), Positives = 82/137 (59%), Gaps = 4/137 (2%)

Query: 2   QTIQFGAR-SGHAKTHEGQMLAFGRDGVLKKDEIVTVANYVRSLSGLSTAPKFDAAAGKK 60
           QTI  G R +    T   +M AFG   ++  ++I  V+ YV SLSG           G K
Sbjct: 154 QTITHGIRFASDPDTRISEMPAFGD--IITPEQIAQVSAYVASLSGKVQDTSL-VEPGAK 210

Query: 61  LFTENCTSCHGDNGKGNPELGAPNLTDQIWLYGSDEGALVETITNGRAGVMPAWVGRLDP 120
           +F ENC +CHG N KGN E GAP+LTD IWLYGS E A+   +   + GVMPAW+ RL  
Sbjct: 211 VFAENCVACHGANAKGNREFGAPDLTDAIWLYGSGEAAIAAQVRAPKHGVMPAWIDRLGE 270

Query: 121 VTVKALAVYVHSLGGGK 137
             VK LAVYVHSLGGG+
Sbjct: 271 TRVKELAVYVHSLGGGE 287


>CC1404 Non COG
          Length = 288

 Score =  120 bits (301), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 80/135 (59%), Gaps = 1/135 (0%)

Query: 3   TIQFGARSGHAKTHEGQMLAFGRDGVLKKDEIVTVANYVRSLSGLSTAPKFDAAAGKKLF 62
           TI  G RSG       QM A+GRD +LK ++I  +  YV +LS          A    LF
Sbjct: 155 TITHGIRSGAEGARVSQMPAYGRDEMLKPEQIDDLTEYVVNLSRRPAN-AAAVARATPLF 213

Query: 63  TENCTSCHGDNGKGNPELGAPNLTDQIWLYGSDEGALVETITNGRAGVMPAWVGRLDPVT 122
              C++CHG  G+GN +LGAPNLTD  WL+G+D  ++   I  G  GVMPAW GRL P T
Sbjct: 214 EAQCSACHGPQGQGNQQLGAPNLTDADWLFGADRASIRGQIYAGNGGVMPAWSGRLSPET 273

Query: 123 VKALAVYVHSLGGGK 137
           +KAL VY+HS  GG+
Sbjct: 274 IKALTVYIHSNAGGQ 288