BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0079.0001.p (641 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1401 Non COG 587 e-167 mlr6411 [O] COG3278 Cbb3-type cytochrome oxidase, subunit 1 Mlo ... 575 e-164 mll6630 [O] COG3278 Cbb3-type cytochrome oxidase, subunit 1 Mlo ... 566 e-161 SMa0765 [O] COG3278 Cbb3-type cytochrome oxidase, subunit 1 Sme ... 565 e-160 SMa1220 [O] COG3278 Cbb3-type cytochrome oxidase, subunit 1 Sme ... 564 e-160 >CC1401 Non COG Length = 548 Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust. Identities = 276/355 (77%), Positives = 314/355 (88%), Gaps = 2/355 (0%) Query: 3 MFWGIAGFTVGLMIAMQLAWPALNF--DLPWTTFGRLRPLHTSAVIFAFGGNVLIATSFY 60 MFWG AG VG++IA QL+WP + + DL + FGRLRPLHTSAVIFAFGGN LIATSFY Sbjct: 88 MFWGAAGLLVGVIIAAQLSWPTIFYFPDLGFLNFGRLRPLHTSAVIFAFGGNALIATSFY 147 Query: 61 VVQKTCRTRLAGDLSPWFVVVGYNFFILVAGTGYLLGVTQSKEYAEPEWYADFWLTIVWV 120 VVQ+TC+ RLAG ++PWFV GY FI++A TGYL+G T KEY+EPEWY D WLTIVWV Sbjct: 148 VVQRTCKARLAGGITPWFVFWGYQLFIVLAATGYLMGATSGKEYSEPEWYTDLWLTIVWV 207 Query: 121 TYLLVFLMTLVKRKEPHIFVANWFYLAFIITIAVLHLGNNPALPVSFLGSKSYIAWGGVQ 180 YLLVFL T+ KRKEPHI+VANWFYLAFI+T+A+LH+ NN A+PV L KSY + GVQ Sbjct: 208 AYLLVFLGTIWKRKEPHIYVANWFYLAFIVTVALLHVVNNAAVPVGLLNHKSYGVFAGVQ 267 Query: 181 DAMFQWWYGHNAVGFFLTAGFLAIMYYFIPKRAERPVYSYRLSIIHFWALIFLYIWAGPH 240 DA+ QWWYGHNAVGFFLTAGFLA+MYYF+P+R ERPVYSYRLSI+HFWALIF+YIWAGPH Sbjct: 268 DALVQWWYGHNAVGFFLTAGFLAMMYYFVPRRVERPVYSYRLSIVHFWALIFIYIWAGPH 327 Query: 241 HLHYTALPDWAQTLGMTFSIMLWMPSWGGMINGMMTLSGAWDKLRTDPVLRMMVVSVAFY 300 HLHYTALP WAQTLGMTFSIMLWMPSWGGMING+MTLSGAWDKLRTDPV+RMMVVS+AFY Sbjct: 328 HLHYTALPQWAQTLGMTFSIMLWMPSWGGMINGLMTLSGAWDKLRTDPVVRMMVVSIAFY 387 Query: 301 GMSTFEGPMMSIKVVNSLSHYTDWTIGHVHSGALGWVGFVSFGALYCLIPWLWNR 355 GMSTFEGP+MSI+ VN+LSHYTDWTIGHVHSGALGWVGF+SFGA+YCL+PWLW + Sbjct: 388 GMSTFEGPVMSIRAVNALSHYTDWTIGHVHSGALGWVGFISFGAIYCLVPWLWKK 442 >mlr6411 [O] COG3278 Cbb3-type cytochrome oxidase, subunit 1 Mlo Mesorhizobium loti Length = 536 Score = 575 bits (1483), Expect = e-164, Method: Compositional matrix adjust. Identities = 275/365 (75%), Positives = 318/365 (87%), Gaps = 4/365 (1%) Query: 3 MFWGIAGFTVGLMIAMQLAWPALNFDLPWTTFGRLRPLHTSAVIFAFGGNVLIATSFYVV 62 +FWG+ G VG++IA+QLA+P LN PW FGRLRPLHTS V+FAFGGN L+ TS YVV Sbjct: 77 VFWGVVGMLVGVIIALQLAYPHLNIQ-PWFNFGRLRPLHTSGVVFAFGGNALLCTSLYVV 135 Query: 63 QKTCRTRLAGDLSPWFVVVGYNFFILVAGTGYLLGVTQSKEYAEPEWYADFWLTIVWVTY 122 Q+TCR RL G WFV GY FI++A TGYLLG+T+S+EYAEPEWY D WLTIVWV Y Sbjct: 136 QRTCRARLFGGKLAWFVFWGYQLFIVMAATGYLLGITESREYAEPEWYVDIWLTIVWVAY 195 Query: 123 LLVFLMTLVKRKEPHIFVANWFYLAFIITIAVLHLGNNPALPVSFLGSKSYIAWGGVQDA 182 L++FL T++KRKEPHI+VANWFYL+FI+TIA+LH+ NN ++P SFLGSKSY A+ GVQDA Sbjct: 196 LILFLGTILKRKEPHIYVANWFYLSFIVTIAMLHVINNLSMPASFLGSKSYSAFSGVQDA 255 Query: 183 MFQWWYGHNAVGFFLTAGFLAIMYYFIPKRAERPVYSYRLSIIHFWALIFLYIWAGPHHL 242 + QWWYGHNAVGFFLTAGFL +MYYF+PK+A RPVYSYRLSI+HFWA+IFLYIWAGPHHL Sbjct: 256 LTQWWYGHNAVGFFLTAGFLGMMYYFVPKQANRPVYSYRLSIVHFWAIIFLYIWAGPHHL 315 Query: 243 HYTALPDWAQTLGMTFSIMLWMPSWGGMINGMMTLSGAWDKLRTDPVLRMMVVSVAFYGM 302 HYTALPDWAQTLGM FSIMLWMPSWGGMING+MTLSGAWDKLRTDP++RMMV++VAFYGM Sbjct: 316 HYTALPDWAQTLGMAFSIMLWMPSWGGMINGLMTLSGAWDKLRTDPIIRMMVMAVAFYGM 375 Query: 303 STFEGPMMSIKVVNSLSHYTDWTIGHVHSGALGWVGFVSFGALYCLIPWLWNRQLYXGLG 362 STFEGP+MSIK VNSLSHYTDWTIGHVHSGALGWVG +SFGA+Y ++P LWNR+ L Sbjct: 376 STFEGPIMSIKTVNSLSHYTDWTIGHVHSGALGWVGMISFGAIYYMVPKLWNRER---LY 432 Query: 363 RLRLV 367 LRLV Sbjct: 433 SLRLV 437 >mll6630 [O] COG3278 Cbb3-type cytochrome oxidase, subunit 1 Mlo Mesorhizobium loti Length = 536 Score = 566 bits (1459), Expect = e-161, Method: Compositional matrix adjust. Identities = 277/365 (75%), Positives = 318/365 (87%), Gaps = 4/365 (1%) Query: 3 MFWGIAGFTVGLMIAMQLAWPALNFDLPWTTFGRLRPLHTSAVIFAFGGNVLIATSFYVV 62 MFWG+ G VG++IA+QLA+P LN PW FGRLRPLHTS V+FAFGGN L+ TS YVV Sbjct: 77 MFWGVVGMLVGVVIALQLAYPDLNIQ-PWFNFGRLRPLHTSGVVFAFGGNALLCTSMYVV 135 Query: 63 QKTCRTRLAGDLSPWFVVVGYNFFILVAGTGYLLGVTQSKEYAEPEWYADFWLTIVWVTY 122 Q+TCR RL G WFV GY FI++A TGYLLG+T+S+EYAEPEWY D WLTIVWV Y Sbjct: 136 QRTCRARLFGGDLAWFVFWGYQLFIVMAATGYLLGITESREYAEPEWYVDIWLTIVWVAY 195 Query: 123 LLVFLMTLVKRKEPHIFVANWFYLAFIITIAVLHLGNNPALPVSFLGSKSYIAWGGVQDA 182 L++FL T++KRKEPHI+VANWFYL+FI+TIA+LH+ NN ++P SFLGSKSY A+ GVQDA Sbjct: 196 LILFLGTILKRKEPHIYVANWFYLSFIVTIAMLHVVNNLSMPASFLGSKSYSAFSGVQDA 255 Query: 183 MFQWWYGHNAVGFFLTAGFLAIMYYFIPKRAERPVYSYRLSIIHFWALIFLYIWAGPHHL 242 + QWWYGHNAVGFFLTAGFL +MYYF+PK+A RPVYSYRLSIIHFWALIFLYIWAGPHHL Sbjct: 256 LTQWWYGHNAVGFFLTAGFLGMMYYFVPKQANRPVYSYRLSIIHFWALIFLYIWAGPHHL 315 Query: 243 HYTALPDWAQTLGMTFSIMLWMPSWGGMINGMMTLSGAWDKLRTDPVLRMMVVSVAFYGM 302 HYTALPDWAQTLGM FSIMLWMPSWGGMING+MTLSGAWDK+RTDP++RMMV+++AFYGM Sbjct: 316 HYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKIRTDPIIRMMVIAIAFYGM 375 Query: 303 STFEGPMMSIKVVNSLSHYTDWTIGHVHSGALGWVGFVSFGALYCLIPWLWNRQLYXGLG 362 STFEGPMMSIK VNSLSHYTDWTIGHVHSGALGWVG +SFGA+Y ++P LWNR+ L Sbjct: 376 STFEGPMMSIKSVNSLSHYTDWTIGHVHSGALGWVGMISFGAIYYMVPKLWNRE---RLY 432 Query: 363 RLRLV 367 LRLV Sbjct: 433 SLRLV 437 >SMa0765 [O] COG3278 Cbb3-type cytochrome oxidase, subunit 1 Sme Sinorhizobium meliloti Length = 539 Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust. Identities = 277/354 (78%), Positives = 315/354 (88%), Gaps = 1/354 (0%) Query: 3 MFWGIAGFTVGLMIAMQLAWPALNFDLPWTTFGRLRPLHTSAVIFAFGGNVLIATSFYVV 62 +FWG+ GF VG+++A+QLA+P LN + PW FGR+RPLHTSAVIFAFGGN LIATSFYVV Sbjct: 80 VFWGVVGFLVGVVVALQLAFPDLNVE-PWFNFGRVRPLHTSAVIFAFGGNALIATSFYVV 138 Query: 63 QKTCRTRLAGDLSPWFVVVGYNFFILVAGTGYLLGVTQSKEYAEPEWYADFWLTIVWVTY 122 Q+T R RL G WFV GY FI++A TGYLLG+TQS+EYAEPEWY D WLTIVWV Y Sbjct: 139 QRTSRARLFGGDLGWFVFWGYQLFIVLAATGYLLGITQSREYAEPEWYVDLWLTIVWVAY 198 Query: 123 LLVFLMTLVKRKEPHIFVANWFYLAFIITIAVLHLGNNPALPVSFLGSKSYIAWGGVQDA 182 L VFL T++ RKEPHI+VANWFYLAFI+TIA+LH+ NN A+PVSF+GSKSY A+ GVQDA Sbjct: 199 LAVFLGTVLMRKEPHIYVANWFYLAFIVTIAMLHIVNNLAVPVSFMGSKSYSAFAGVQDA 258 Query: 183 MFQWWYGHNAVGFFLTAGFLAIMYYFIPKRAERPVYSYRLSIIHFWALIFLYIWAGPHHL 242 + QWWYGHNAVGFFLTAGFLA+MYYFIPK+ RPVYSYRLSIIHFWALIF+YIWAGPHHL Sbjct: 259 LTQWWYGHNAVGFFLTAGFLAMMYYFIPKQVNRPVYSYRLSIIHFWALIFMYIWAGPHHL 318 Query: 243 HYTALPDWAQTLGMTFSIMLWMPSWGGMINGMMTLSGAWDKLRTDPVLRMMVVSVAFYGM 302 HYTALPDWAQTLGM FSIMLWMPSWGGMING+MTLSGAWDK+RTDPV+RMMV++VAFYGM Sbjct: 319 HYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKIRTDPVVRMMVMAVAFYGM 378 Query: 303 STFEGPMMSIKVVNSLSHYTDWTIGHVHSGALGWVGFVSFGALYCLIPWLWNRQ 356 +TFEGPMMSIK VNSLSHYTDWTIGHVHSGALGW G ++FGA+Y L+P LWNR+ Sbjct: 379 ATFEGPMMSIKTVNSLSHYTDWTIGHVHSGALGWNGLITFGAVYYLVPKLWNRE 432 >SMa1220 [O] COG3278 Cbb3-type cytochrome oxidase, subunit 1 Sme Sinorhizobium meliloti Length = 539 Score = 564 bits (1453), Expect = e-160, Method: Compositional matrix adjust. Identities = 276/354 (77%), Positives = 316/354 (89%), Gaps = 1/354 (0%) Query: 3 MFWGIAGFTVGLMIAMQLAWPALNFDLPWTTFGRLRPLHTSAVIFAFGGNVLIATSFYVV 62 +FWG+ GF VG+++A+QLA+P LN + PW FGR+RPLHTSAVIFAFGGN LIATSFYVV Sbjct: 80 VFWGVVGFLVGVVVALQLAFPELNVE-PWFNFGRVRPLHTSAVIFAFGGNALIATSFYVV 138 Query: 63 QKTCRTRLAGDLSPWFVVVGYNFFILVAGTGYLLGVTQSKEYAEPEWYADFWLTIVWVTY 122 Q+T R RL G WFV GY FI++A +GYLLG+TQS+EYAEPEWY D WLTIVWV Y Sbjct: 139 QRTSRARLFGGDLGWFVFWGYQLFIVLAASGYLLGITQSREYAEPEWYVDLWLTIVWVAY 198 Query: 123 LLVFLMTLVKRKEPHIFVANWFYLAFIITIAVLHLGNNPALPVSFLGSKSYIAWGGVQDA 182 L+ FL T++KRKEPHI+VANWFYLAFI+TIA+LH+ NN A+PVSFLGSKSY A+ GVQDA Sbjct: 199 LVAFLGTIMKRKEPHIYVANWFYLAFIVTIAMLHVVNNLAVPVSFLGSKSYSAFSGVQDA 258 Query: 183 MFQWWYGHNAVGFFLTAGFLAIMYYFIPKRAERPVYSYRLSIIHFWALIFLYIWAGPHHL 242 + QWWYGHNAVGFFLTAGFLA+MYYFIPK+ RPVYSYRLSIIHFWA+IF+YIWAGPHHL Sbjct: 259 LTQWWYGHNAVGFFLTAGFLAMMYYFIPKQVNRPVYSYRLSIIHFWAIIFMYIWAGPHHL 318 Query: 243 HYTALPDWAQTLGMTFSIMLWMPSWGGMINGMMTLSGAWDKLRTDPVLRMMVVSVAFYGM 302 HYTALPDWAQTLGM FSIMLWMPSWGGMING+MTLSGAWDK+RTDPV+RMMV++VAFYGM Sbjct: 319 HYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKIRTDPVVRMMVMAVAFYGM 378 Query: 303 STFEGPMMSIKVVNSLSHYTDWTIGHVHSGALGWVGFVSFGALYCLIPWLWNRQ 356 +TFEGPMMSIK VNSLSHYTDWTIGHVHSGALGW G ++FGA+Y L+P LWNR+ Sbjct: 379 ATFEGPMMSIKTVNSLSHYTDWTIGHVHSGALGWNGLITFGAIYYLVPKLWNRE 432