BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0077.0021.p         (154 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC2195 [S] COG1238 Predicted membrane protein Ccr Caulobacter vi...   135   3e-32
BMEI0385 [S] COG1238 Predicted membrane protein Bme Brucella mel...   115   5e-26
PA5517 [S] COG1238 Predicted membrane protein Pae Pseudomonas ae...   106   2e-23
AGc2265 [S] COG1238 Predicted membrane protein Atu Agrobacterium...   102   4e-22
mlr3474 [S] COG1238 Predicted membrane protein Mlo Mesorhizobium...    91   7e-19

>CC2195 [S] COG1238 Predicted membrane protein Ccr Caulobacter vibrioides
          Length = 202

 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/146 (47%), Positives = 101/146 (69%), Gaps = 1/146 (0%)

Query: 1   MLLPMSLARPKRAWWFAAVCTAASVAGGVLGYAIGALLYDSLGQWLIHLYGLSDKVDAFR 60
           ML PM LA+P++AW +A +CT ASV GG+LGYAIG  L D LG W++ + G +  ++ F+
Sbjct: 40  MLAPMCLAKPEKAWHYATLCTLASVLGGILGYAIGFFLQD-LGIWMMKVTGHAGGLEEFQ 98

Query: 61  ASYAEWGAVIILLKGLTPIPYKLVTITSGFAGYNIWLFILCSIVARGGRFFFVAVLLNRY 120
             Y ++G  +IL KGLTPIPYKLVT+ SG A ++  +FI+ S++ RG RFF VA ++ ++
Sbjct: 99  CWYGKYGVWVILAKGLTPIPYKLVTVASGLAAFSFPMFIIASVITRGARFFLVAFVVKKF 158

Query: 121 GDFVRAELERRLGLWVAIGAIVLVLG 146
           G  +   +ERRL L+  I   +LV+G
Sbjct: 159 GPALLPVIERRLALFAGIFIALLVIG 184


>BMEI0385 [S] COG1238 Predicted membrane protein Bme Brucella melitensis
          Length = 196

 Score =  115 bits (287), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 100/154 (64%), Gaps = 3/154 (1%)

Query: 1   MLLPMSLARPKRAWWFAAVCTAASVAGGVLGYAIGALLYDSLGQWLIHLYGLSDKVDAFR 60
           + LPM+LARP+RAW +A + T ASV GG+ G+ +G   Y+ + + ++ +YG  D  +  R
Sbjct: 40  LFLPMALARPERAWRYALIATVASVLGGIAGWYLGYHAYEQIAKPVLEMYGKLDTFERLR 99

Query: 61  ASYAEWGAVIILL-KGLTPIP-YKLVTITSGFAGYNIWLFILCSIVARGGRFFFVAVLLN 118
            + +    +++L+  GL  +P  K+VTI SG AG NIWLFI  +IVARG RFF +A LL 
Sbjct: 100 GTTSADAILLMLITSGLAHLPPIKVVTILSGAAGINIWLFIASAIVARGARFFLLAWLLR 159

Query: 119 RYGDFVRAELERRLGLWV-AIGAIVLVLGFVVAF 151
           RYG+ +R  +E+RLGL   A+ A+++ L   V +
Sbjct: 160 RYGESIRHFIEKRLGLIAGAVAAVLIALFLAVKY 193


>PA5517 [S] COG1238 Predicted membrane protein Pae Pseudomonas aeruginosa
          Length = 194

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 1/150 (0%)

Query: 1   MLLPMSLARPKRAWWFAAVCTAASVAGGVLGYAIGALLYDSLGQWLIHLYGLSDKVDAFR 60
           +L+PM LA   +AW +AA+C  +SV GG+ GY IG LL++S+   ++  YGL +  +   
Sbjct: 40  LLVPMVLANRAKAWRYAAICAISSVLGGIAGYFIGLLLFESVAMPILAFYGLLENFEQVA 99

Query: 61  ASYAEWGAVIILL-KGLTPIPYKLVTITSGFAGYNIWLFILCSIVARGGRFFFVAVLLNR 119
             Y E G +++LL  G TP+PYK++TITSG    ++WLF+  S+VAR  RF     LL  
Sbjct: 100 ERYNELGWLMVLLGGGFTPLPYKVITITSGVTQLDLWLFVGLSLVARSLRFAATCALLFW 159

Query: 120 YGDFVRAELERRLGLWVAIGAIVLVLGFVV 149
            G  ++  +ERRLG+   + A+++V G ++
Sbjct: 160 AGPRLKTLIERRLGMAFVLMAVMVVGGLML 189


>AGc2265 [S] COG1238 Predicted membrane protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 267

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 88/136 (64%), Gaps = 4/136 (2%)

Query: 1   MLLPMSLARPKRAWWFAAVCTAASVAGGVLGYAIGALLYDSLGQWLIHLYGLSDKVDAFR 60
           + LPM LA+PK+A ++A V T ASV GG+ G+ +G   ++S+ + ++  YG  D  +  +
Sbjct: 112 LFLPMVLAKPKKAMFYALVATVASVLGGIAGWFLGHYAFESIARPILEFYGKLDSFEQLK 171

Query: 61  ASYAEWGAVIILL--KGLTPIP-YKLVTITSGFAGYNIWLFILCSIVARGGRFFFVAVLL 117
            S   +  +++LL   GL  +P  K+VTI SG A  ++ LFIL +IVARG RFF +A LL
Sbjct: 172 NS-VNYETIVLLLVTSGLAHLPPIKVVTILSGAANISLGLFILSAIVARGARFFILAGLL 230

Query: 118 NRYGDFVRAELERRLG 133
            RYG+ VR  +E+RLG
Sbjct: 231 QRYGESVRHFIEKRLG 246


>mlr3474 [S] COG1238 Predicted membrane protein Mlo Mesorhizobium loti
          Length = 194

 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 82/130 (63%), Gaps = 1/130 (0%)

Query: 3   LPMSLARPKRAWWFAAVCTAASVAGGVLGYAIGALLYDSLGQWLIHLYGLSDKVDAFRAS 62
           LPM+LARP RA+ +A   TAASV GG+ G+ IG   YD++ + ++  +G  +  + ++ S
Sbjct: 42  LPMALARPDRAYRYALTATAASVLGGIAGWMIGYFAYDTIARPILEHFGGLETFERWQNS 101

Query: 63  YAEWGAVIILLKGLTPIP-YKLVTITSGFAGYNIWLFILCSIVARGGRFFFVAVLLNRYG 121
                 V+++  GL  +P  K+VTI +G    N+ +FI+ +IVARG RF  +A LL RYG
Sbjct: 102 GIGLMLVLLVTSGLAHLPPIKVVTILAGALHVNLLIFIISAIVARGARFLLLAWLLRRYG 161

Query: 122 DFVRAELERR 131
           + +R  +E+R
Sbjct: 162 ESIREFIEKR 171