BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0072.0142.p         (176 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll7655 Non COG                                                        86   5e-17
SMc00128 [S] COG5436 Predicted integral membrane protein Sme Sin...    64   2e-10

>mll7655 Non COG
          Length = 189

 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 92/167 (55%), Gaps = 6/167 (3%)

Query: 3   RLLLTILAGVLLGGVVHLVSVLALPRIASQDAYSRLTPMTKLNEVTQLPLADPSHSPM-P 61
           RL   +L G++  G+VH+V +L +P  + +DA+SRL+  + L  + +L  A+   +P+  
Sbjct: 10  RLFHAVLLGLVGAGIVHIVVLLLVPEFSERDAWSRLSMASDLYRMNRLD-AEAGGAPVVK 68

Query: 62  LMDPAFAVAICRYDLSTGPLKLTVPVSQAYTSVSFYTRNEVAYYAINDRSAGKKVIELDL 121
            +DP F    CR+DL  G +++  P +  + SVS Y RN    Y+ ND +A    ++  +
Sbjct: 69  SVDPLFYATACRFDLEEGMVRIKAPGNVPFWSVSVYDRNGHNIYSFNDHTATGGKLDAVV 128

Query: 122 MTEAQHNELPED--EEITAADRLIIDSPTSTGLILLKALAPEPGLMP 166
           +T AQ  ++ +D  E +  A  + +++P   G+ ++++  P+    P
Sbjct: 129 LTPAQMIDVRKDLPEGLQGA--IFVEAPIDEGIFVIRSFVPDDSWKP 173


>SMc00128 [S] COG5436 Predicted integral membrane protein Sme Sinorhizobium
           meliloti
          Length = 181

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)

Query: 1   MIRLLLTILAGVLLGGVVHLVSVLALPRIASQDAYSRLTPMTKLNEVTQLPL-ADPSHSP 59
           M  ++  IL G++   ++H+V +LALP+   +DAY+R+  + +++     PL A+P  + 
Sbjct: 1   MRSIIFAILVGLVGAALLHIVIILALPQFTGRDAYTRVLGLLEMDSF--FPLTAEPGPTG 58

Query: 60  MPLMDPAFAVAICRYDLSTGPLKLTVPVSQAYTSVSFYTRNEVAYYAINDRSAGKKVIEL 119
           +   DP    A+C + ++  P +        + S++ +       +++ND++A    ++L
Sbjct: 59  LNNADPFLRTAVCSFSVADAPARFVGRGDVPFWSLAIFDSGSNEVFSMNDQTAVNGDLDL 118

Query: 120 DLMTEAQHNELPEDEEITAADRLIIDSPTSTGLILLKALAPEPGLMPQAQASLAAKR 176
            + T  Q  EL +      A  ++I+     G  +L+ALAP        +  LA  R
Sbjct: 119 VVATPIQLVELRKSPPEALAQSIMIEMKDQEGYAVLRALAPLDSFEDLVRTFLAESR 175