BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0072.0011.p (331 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb20459 [M] COG1087 UDP-glucose 4-epimerase Sme Sinorhizobium m... 344 2e-94 CC2383 [M] COG1087 UDP-glucose 4-epimerase Ccr Caulobacter vibri... 330 3e-90 CC0092 [M] COG1087 UDP-glucose 4-epimerase Ccr Caulobacter vibri... 327 2e-89 BMEII0730 [M] COG1087 UDP-glucose 4-epimerase Bme Brucella melit... 321 1e-87 sll0244 [M] COG1087 UDP-glucose 4-epimerase Syn Synechocystis 318 1e-86 >SMb20459 [M] COG1087 UDP-glucose 4-epimerase Sme Sinorhizobium meliloti Length = 328 Score = 344 bits (883), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 179/313 (57%), Positives = 210/313 (67%) Query: 7 ILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVRWGPLVIGDVADHDRIAATIR 66 IL+TGGAGYIGSH AK + G PVVYDNL+TG+R VRWGP V GD+ D R+ I Sbjct: 6 ILVTGGAGYIGSHTAKLLRLEGIEPVVYDNLTTGNRSAVRWGPFVQGDILDGRRLIEVIE 65 Query: 67 EHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFSSTGAVYGN 126 H AV+HFAA + VGESVADP KY+ NNV GTL LL R+ G D+++FSS+ A YG Sbjct: 66 AHQPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACRQTGVDKVIFSSSCATYGV 125 Query: 127 AGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGADASVTIGEL 186 PI E+ +NPYG++KL+ E +LADY AA+ N V LRYFNACGAD +GE Sbjct: 126 PAVLPIDEATPQAPINPYGKTKLVAEHMLADYAAAFALNYVSLRYFNACGADPEGDLGEW 185 Query: 187 RDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIAALELLLKG 246 DPETHLIPRALMA G +P IFGEDYDTPDGT VRDYIHV DLASAH+ A L KG Sbjct: 186 HDPETHLIPRALMAAAGRIPHLEIFGEDYDTPDGTCVRDYIHVADLASAHVLAYRHLAKG 245 Query: 247 DAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSRSESGLGFK 306 NLGTG G+S+++VL I TG VP V R RRAGDPP L AD + LGF Sbjct: 246 GGNVALNLGTGRGFSIKEVLRTIGEITGHDVPVVFRRRRAGDPPALYADAGLACRTLGFL 305 Query: 307 ASRSDLGYIIRSA 319 SDL I+R+A Sbjct: 306 PRYSDLETIVRTA 318 >CC2383 [M] COG1087 UDP-glucose 4-epimerase Ccr Caulobacter vibrioides Length = 327 Score = 330 bits (846), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 168/319 (52%), Positives = 214/319 (67%), Gaps = 1/319 (0%) Query: 6 SILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVRWGPLVIGDVADHDRIAATI 65 ++L+ GGAGY+GSHC A+A AGF PVVYD+LS GHR+ V+WGPL +GD+ D R+ A Sbjct: 3 TVLVAGGAGYVGSHCCLALAAAGFRPVVYDDLSNGHREHVQWGPLEVGDIRDGARLDAVF 62 Query: 66 REHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFSSTGAVYG 125 H +AV+HFAA VGESV +P +F NNV GT+ L+ R AG + +VFSST A +G Sbjct: 63 AAHAPVAVLHFAARIEVGESVKNPGAFFDNNVGGTITLIEAARRAGVNAMVFSSTCATFG 122 Query: 126 NAGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGADASVTIGE 185 + P+ E +NPYGRSKLM+EQ LADY F S +RYFNA GAD IGE Sbjct: 123 DPVHLPMAEDHPQAPLNPYGRSKLMVEQALADYDRYVGFKSAVMRYFNAAGADPEGRIGE 182 Query: 186 LRDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIAALELLLK 245 +PETH IP A+ LG F IFG+DYDT DGTAVRDYIHV DLA AH++AL LL Sbjct: 183 WHEPETHAIPLAIQVALGQRSHFTIFGDDYDTRDGTAVRDYIHVLDLADAHVSALRRLLA 242 Query: 246 GDAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSRSESGLGF 305 G + +NLGTGTG +VR+++D + TG+ +P + RRAGD P+LV D +R+ LG+ Sbjct: 243 GGSSDSYNLGTGTGTTVRELVDGVGRVTGKPLPVQMAPRRAGDAPVLVGDNTRAREHLGW 302 Query: 306 KASRSDLGYIIRSAWAWHR 324 K SR DL + SAW WH+ Sbjct: 303 KPSR-DLDATLSSAWRWHQ 320 >CC0092 [M] COG1087 UDP-glucose 4-epimerase Ccr Caulobacter vibrioides Length = 327 Score = 327 bits (839), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 164/319 (51%), Positives = 216/319 (67%), Gaps = 1/319 (0%) Query: 6 SILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVRWGPLVIGDVADHDRIAATI 65 ++L+TGGAGY+GSHC A+A+AGF PVV+D+LS GHR+ V+WGPL +GD+ D R+ A Sbjct: 3 TVLVTGGAGYVGSHCCLALAEAGFRPVVFDDLSNGHREHVQWGPLEVGDIRDAARLDAVF 62 Query: 66 REHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFSSTGAVYG 125 + +AV+HFAA VGESV +P +F NV GT+ L+ R AG +VFSST A +G Sbjct: 63 AAYAPVAVLHFAARIEVGESVKNPGAFFDTNVGGTITLIEAARRAGVKVVVFSSTCATFG 122 Query: 126 NAGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGADASVTIGE 185 + P+ E+ +NPYGRSKLM+EQ LADY S +RYFNA GAD IGE Sbjct: 123 DPVDLPMKETHPQAPLNPYGRSKLMVEQALADYDRYVGLKSAVMRYFNAAGADPQGRIGE 182 Query: 186 LRDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIAALELLLK 245 +PETH +P A+ LG P F IFG+DYDT DGTAVRDY+HV DLA AH+AAL+ LL Sbjct: 183 WHEPETHAVPLAIQVALGQRPRFTIFGDDYDTRDGTAVRDYVHVLDLADAHVAALKRLLV 242 Query: 246 GDAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSRSESGLGF 305 G + +NLGTGTG +VR+++D + G +P + RR GD P+LV D +++ + LG+ Sbjct: 243 GGSSETYNLGTGTGTTVRELVDGVGKVAGAPLPVEIASRRPGDAPVLVGDHAKARAELGW 302 Query: 306 KASRSDLGYIIRSAWAWHR 324 KASRS L I+ +AW WHR Sbjct: 303 KASRS-LDEILSTAWRWHR 320 >BMEII0730 [M] COG1087 UDP-glucose 4-epimerase Bme Brucella melitensis Length = 328 Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 208/317 (65%) Query: 3 STGSILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVRWGPLVIGDVADHDRIA 62 S ++L+ GGAG+IGSH AK +A G+ PVVYDNLSTGH+ VRWG V GD+ D R+ Sbjct: 2 SANNVLVVGGAGFIGSHTAKLLAGQGYAPVVYDNLSTGHQSAVRWGDFVEGDILDQARLV 61 Query: 63 ATIREHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFSSTGA 122 T+ ++ +AV+HFAA + VGESV DP KY+ NNV GT LL R ++FSS+ A Sbjct: 62 ETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQNVIFSSSCA 121 Query: 123 VYGNAGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGADASVT 182 YG R PI E A +NPYGR+KL+ E +LADY AY V LRYFNA GAD Sbjct: 122 TYGVPSRLPIGEGEAQNPINPYGRTKLIAEHMLADYAVAYGLRYVALRYFNASGADIDGE 181 Query: 183 IGELRDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIAALEL 242 +GE DPETHLIPRA+MA G + ++G+DY+TPDGT +RDYIHV DLA AH+ A+E Sbjct: 182 LGEKHDPETHLIPRAMMAAAGRLDVLEVYGDDYETPDGTCIRDYIHVIDLARAHVLAVEH 241 Query: 243 LLKGDAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSRSESG 302 L + NLGTG G S R+++ +I TG +VP +R RRAGDPP L ADP+ + Sbjct: 242 LKEAGGNLAVNLGTGRGTSSREIVQSIGRLTGRSVPVAMRARRAGDPPALYADPALAAEK 301 Query: 303 LGFKASRSDLGYIIRSA 319 LGF SDL IIR+A Sbjct: 302 LGFHTVYSDLDTIIRTA 318 >sll0244 [M] COG1087 UDP-glucose 4-epimerase Syn Synechocystis Length = 338 Score = 318 bits (815), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 165/329 (50%), Positives = 208/329 (63%), Gaps = 2/329 (0%) Query: 1 MASTGSILITGGAGYIGSHCAKAVAKAGFLPVVYDNLSTGHRDFVR--WGPLVIGDVADH 58 MA+ +IL+TGGAGYIGSH A+ +AGF ++YDNLS GH++ V+ LV+G D Sbjct: 1 MATQQTILVTGGAGYIGSHGVLALQQAGFDVLIYDNLSYGHKELVQPLGVELVVGHTGDR 60 Query: 59 DRIAATIREHDALAVMHFAAFSAVGESVADPQKYFTNNVAGTLGLLRGMREAGCDRLVFS 118 ++ + AVMHFAAF AVGESV P Y+ NNV GTL LL M AG + VFS Sbjct: 61 QKLDQLFATRNIAAVMHFAAFIAVGESVQKPDIYYQNNVVGTLTLLEAMLAAGIKKFVFS 120 Query: 119 STGAVYGNAGRDPIPESAAGPTVNPYGRSKLMIEQILADYRAAYRFNSVCLRYFNACGAD 178 ST AVYG P+ ES ++PY SK M+EQILAD+ AY F SV RYFNA GAD Sbjct: 121 STCAVYGMPKEIPMTESHPIDPLSPYAASKRMVEQILADFDQAYGFKSVIFRYFNASGAD 180 Query: 179 ASVTIGELRDPETHLIPRALMALLGHVPDFAIFGEDYDTPDGTAVRDYIHVDDLASAHIA 238 +GE +PETHLIP AL+ L P ++FG DYDT DGTA+RDYIHV DLA AH+ Sbjct: 181 PQGRLGEDHNPETHLIPLALLTALKQRPQLSVFGTDYDTLDGTALRDYIHVCDLAIAHVL 240 Query: 239 ALELLLKGDAGGVFNLGTGTGYSVRQVLDAIRAETGEAVPSVVRERRAGDPPILVADPSR 298 L+ LL+G +FNLG G G+SVRQV++ +A TG +P + RR GD PILV ++ Sbjct: 241 GLQYLLEGGESNIFNLGNGNGFSVRQVIEVAKAVTGLDIPYQLCPRRPGDAPILVGSSAK 300 Query: 299 SESGLGFKASRSDLGYIIRSAWAWHRKAH 327 + LG+ DL II AW WH++ H Sbjct: 301 AREILGWNPQYPDLHTIIDHAWQWHQRRH 329