BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0070.0007.p         (164 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC3189_1 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Ccr...   171   6e-43
RSc1759_1 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Rs...   161   7e-40
BS_ysiB [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Bsu ...   145   3e-35
mll4199_1 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Ml...   145   5e-35
BH3101 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Bha B...   136   2e-32

>CC3189_1 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Ccr Caulobacter
           vibrioides
          Length = 320

 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/159 (61%), Positives = 118/159 (74%)

Query: 1   VSEVVKLERHDNIAVVTVNSPPVNALSAAVRGGIFECIKSAIDDAQVQGIVLTCAGRTFI 60
           ++ V       +I VVT+NSPPVNALSAAVR G+     +AI DA V+ IVL C G+TFI
Sbjct: 4   INAVTDFSVEGDIGVVTLNSPPVNALSAAVREGLQGAFDAAIADAAVKAIVLICDGKTFI 63

Query: 61  AGADITEFGKPPKPPGLAEVLSLMESSPKPIVAAIHGTALGGGLEVALACHYRVATKDAK 120
           AGADITEFGK    P L +V +++E+SPKP++AAIHGTALGGGLEVAL  +YRVA   AK
Sbjct: 64  AGADITEFGKAMTGPSLQDVQNVIENSPKPVIAAIHGTALGGGLEVALVANYRVAVPSAK 123

Query: 121 LGLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPI 159
            GLPEV +GLLPGAGGTQRLPR VG E A++M+  G  +
Sbjct: 124 AGLPEVNIGLLPGAGGTQRLPRIVGVEKALEMVTTGQHV 162


>RSc1759_1 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Rso Ralstonia
           solanacearum
          Length = 303

 Score =  161 bits (407), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 86/158 (54%), Positives = 109/158 (68%), Gaps = 2/158 (1%)

Query: 1   VSEVVKLERHDNIAVVTVNSPPVNALSAAVRGGIFECIKSAIDDAQVQGIVLTCAGRTFI 60
            S   + +  D +AV+T+++PPVN L  A R GI E +  A DD  V+ IV+T AG+ F 
Sbjct: 12  TSMTAEYKVQDGVAVITLSNPPVNGLGHATRLGIVEGMVRAGDDPDVKAIVITGAGKAFS 71

Query: 61  AGADITEFGKPP--KPPGLAEVLSLMESSPKPIVAAIHGTALGGGLEVALACHYRVATKD 118
            GADI EF  P   + P L  V+  +ESS KP+VAAIH  A+GGGLE+A+ CHYRVA   
Sbjct: 72  GGADIREFNTPKAMQEPTLHAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPG 131

Query: 119 AKLGLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGG 156
           A++ LPEVKLG+LPGAGGTQRLPRA+G E A+ MIV G
Sbjct: 132 AQIALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSG 169


>BS_ysiB [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Bsu Bacillus
           subtilis
          Length = 258

 Score =  145 bits (366), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/154 (49%), Positives = 105/154 (68%), Gaps = 7/154 (4%)

Query: 13  IAVVTVNSPPVNALSAAVRGGIFECIKSAIDDAQVQGIVLTCAGRTFIAGADITEFG--K 70
           +AV+T+++PP NALS+ +   +  C+     DA V+ I++   GR F AGADI EF   K
Sbjct: 12  VAVLTIHNPPANALSSRILEELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTSLK 71

Query: 71  PPKPPGL-----AEVLSLMESSPKPIVAAIHGTALGGGLEVALACHYRVATKDAKLGLPE 125
             +   L      +++  +ES PKPI+AAIHG ALGGGLE+A+ACH R+A +DAKLGLPE
Sbjct: 72  GNEDSSLLAERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPE 131

Query: 126 VKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPI 159
           + LG++PG  GTQRLPR VG   A+++I  G+PI
Sbjct: 132 LNLGIIPGFAGTQRLPRYVGTAKALELIGSGEPI 165


>mll4199_1 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mlo
           Mesorhizobium loti
          Length = 312

 Score =  145 bits (365), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/151 (62%), Positives = 115/151 (76%), Gaps = 1/151 (0%)

Query: 10  HDN-IAVVTVNSPPVNALSAAVRGGIFECIKSAIDDAQVQGIVLTCAGRTFIAGADITEF 68
           +DN +A+VT+++ PVNALS  VR  + + +    DDA V  IV+ CAGRTF+AGADITEF
Sbjct: 9   NDNGVAIVTIDNSPVNALSFHVRAPLMQALVDLRDDASVTAIVIACAGRTFVAGADITEF 68

Query: 69  GKPPKPPGLAEVLSLMESSPKPIVAAIHGTALGGGLEVALACHYRVATKDAKLGLPEVKL 128
           GKP + P L  +++++E+  KP VAAIHGTALGGGLE+AL CH+RVA   AKLGLPEVKL
Sbjct: 69  GKPVQQPDLRAIVAMLETIAKPTVAAIHGTALGGGLELALGCHFRVADAGAKLGLPEVKL 128

Query: 129 GLLPGAGGTQRLPRAVGPELAVKMIVGGDPI 159
           GLLPG GGT RLPR VG   A+KMIV G PI
Sbjct: 129 GLLPGGGGTVRLPRLVGAVKALKMIVSGTPI 159


>BH3101 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Bha Bacillus
           halodurans
          Length = 258

 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 97/154 (62%), Gaps = 7/154 (4%)

Query: 13  IAVVTVNSPPVNALSAAVRGGIFECIKSAIDDAQVQGIVLTCAGRTFIAGADITEFGKPP 72
           +A +T+  PP NALS  V   +   +     D  V+ I+L   GR F AGADI EF +  
Sbjct: 13  VATITIARPPANALSRRVLEQLDHILTQVEKDDHVRVILLHGEGRFFAAGADIKEFLQVK 72

Query: 73  KPPGLAEV-------LSLMESSPKPIVAAIHGTALGGGLEVALACHYRVATKDAKLGLPE 125
                AE+          ME+  KPI+AAIHG ALGGGLE+A+ACH R+AT+D KLGLPE
Sbjct: 73  DGSEFAELAKQGQRLFDRMEAFSKPIIAAIHGAALGGGLELAMACHIRLATEDTKLGLPE 132

Query: 126 VKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPI 159
           ++LGL+PG  G+QRLPR VG   A++M++  +PI
Sbjct: 133 LQLGLIPGFAGSQRLPRLVGRAKALEMMLTSEPI 166