BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0069.0006.p (292 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC3620 [ET] COG0834 ABC-type amino acid transport/signal transd... 74 4e-13 mlr4789 [ET] COG0834 ABC-type amino acid transport/signal transd... 68 2e-11 mlr0549 [ET] COG0834 ABC-type amino acid transport/signal transd... 67 4e-11 CC1441 [ET] COG0834 ABC-type amino acid transport/signal transdu... 67 7e-11 PA2204 [ET] COG0834 ABC-type amino acid transport/signal transdu... 66 1e-10 >CAC3620 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Cac Clostridium acetobutylicum Length = 264 Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 118/238 (49%), Gaps = 19/238 (7%) Query: 38 SAQTPADNTLDRIRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDLAKLLDVKLE 97 SA D++L+R++ +K + I + P KD A+G SGF I+MAN +AK L VK + Sbjct: 24 SATVSKDDSLERVKKAKEIVIGIDDTYPPMEFKDKATGKVSGFDIDMANAIAKKLGVKTK 83 Query: 98 YVESTYGNSILDLQANKIDLGF-ALNPTPQRALVVDFTNLVFPHPFG--AMLKK--GLEA 152 +V +++ L L++ K D+ +++ T +R + F++ P+ +G A+ K Sbjct: 84 FVPNSFDGIFLALKSKKFDVVHSSISITDERKKAMIFSD---PYIYGGNAIFVKSDNTTI 140 Query: 153 KTWADINKPEVKIAVDVGSANEAVARRFAPNATIKSLKSRDEVMLEMSSGRVDCVVNALV 212 K D N V +VG+ + V + + +K + + L++ +GR+ VV+ + Sbjct: 141 KNEKDFNNQVV--GCEVGTTAQDVLAKISGIKEVKKYNAMTDAFLDLQNGRIAAVVSDPM 198 Query: 213 LGLTAIAKNPNLGTYKILASPSVTIASGTAVRREADKRWRDFLSVWIDYNRGIGQMRE 270 +G +P G +K L S G A R+E DK RD YN+ I ++++ Sbjct: 199 VGDYYNVTDP--GKFKKLESSLTQEPIGVAFRKE-DKSLRD------AYNKAIKELKK 247 >mlr4789 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Mlo Mesorhizobium loti Length = 257 Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 12/226 (5%) Query: 52 ASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDLAKLLDVKLEYVESTYGNSILDLQ 111 A LRI G P FN A GT GF I++ L + + E+ + SI LQ Sbjct: 24 AQDKLRIGT-EGAYPPFNYANADGTLGGFDIDLGKALCAEMKAECEFTVQDFDGSIPALQ 82 Query: 112 ANKIDLGFALNPTPQRALVVDFTNLVFPHPFGAMLKKGLEAKTWADINKPEVK---IAVD 168 A K D + TP+RA V+FT+ + P + K T A + ++K + V Sbjct: 83 AGKFDAIINITITPERAEKVEFTHKYYQTPPAITVPKD---STIAGTSPDDLKGKALGVQ 139 Query: 169 VGSANEAVARRFAPNATIKSLKSRDEVMLEMSSGRVDCVVNALVLGLTAIAKNPNLGTYK 228 + ++ A + +T+K+ + D+ +M++GR+D +++ ++ LT K P+ K Sbjct: 140 TATIHQKFAEQKYSGSTVKAYPTGDDARTDMANGRLDAMMDGSII-LTEWLKKPDGACCK 198 Query: 229 IL----ASPSVTIASGTAVRREADKRWRDFLSVWIDYNRGIGQMRE 270 +L A P++ ++ +K + ID R G+ +E Sbjct: 199 LLGTLTADPAIHGPGVGIALQKGNKELAGKFNAAIDALRANGKYKE 244 >mlr0549 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Mlo Mesorhizobium loti Length = 261 Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 14/226 (6%) Query: 54 KVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDLAKLLDVKLEYVESTYGNSILDLQAN 113 K LRI G P FN + G GF I++A L + VK +V + I LQA Sbjct: 26 KTLRIGT-EGAYPPFNNLTSDGKLVGFDIDIAQALCDQMKVKCTFVAQDWDGIIPALQAG 84 Query: 114 KIDLGFA-LNPTPQRALVVDFTNLVFPHPFGAMLKKG--LEAKTWADINKPEVKIAVDVG 170 K D A ++ TP+R VDFT+ + P + K L+ T AD+ + +A Sbjct: 85 KFDAIVASMSITPERKEKVDFTHKYYNTPSALAVPKDSTLKGVTKADLAGKTIGVATTTT 144 Query: 171 SANEAVARRFAPNATIKSLKSRDEVMLEMSSGRVDCVVNALVLGLTAIAKNPNLGTYKIL 230 N A + ++T+K S E ++++GR+D + + +V+ L +P+ KIL Sbjct: 145 HFN--YASKTYTDSTVKGYPSSPEEQADLANGRLDAIEDDIVV-LQQWLDSPDGACCKIL 201 Query: 231 ASPS---VTI---ASGTAVRREADKRWRDFLSVWIDYNRGIGQMRE 270 PS V I +G AVR+ + + L+ ID R G+ +E Sbjct: 202 GQPSPQPVEIFGPGAGIAVRK-GETDLVNKLNEAIDAIRANGKYKE 246 >CC1441 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Ccr Caulobacter vibrioides Length = 261 Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 20/234 (8%) Query: 48 DRIRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDLAKLLDVKLEYVESTYGNSI 107 DRI+AS LR+ L G P FN SG +GF ++ A LA+ L VK E+ + + + Sbjct: 33 DRIKASGKLRVG-LEGTYPPFNFQDKSGQLAGFEVDFAKALAEQLGVKAEFSPAPFAGLL 91 Query: 108 LDLQANKIDLGF-ALNPTPQRALVVDFTNLVFPHPFGAMLKKGLEAKTWADINKPE---- 162 L++ +ID+ + TP R DF+ + KG A T PE Sbjct: 92 GSLESGRIDVVINQITITPDRQAKYDFSEPYTVSGIQIIALKGKPAPT-----GPEGLTG 146 Query: 163 VKIAVDVGSANEAVARRFAPNATIKSLKSRDEVMLEMSSGRVDCVVNALVLGLTAIAKNP 222 K+ V +G+ E R P A +++ ++ +GR+D V+N ++ + +P Sbjct: 147 KKVGVGLGTNYEQWLRANVPTADVRTYDDDPTKYQDLRAGRIDAVLNDRLVAADFVKTSP 206 Query: 223 NLGTYKILASPSVTIASGTAVRREADKRWRDFLSVWIDYNRGIGQM----REWF 272 + +AS A G+ V + D + ++ I+ R G++ ++WF Sbjct: 207 -----EFVASGQPFAAQGSGVAMQKDPALKVVINQAINALRANGKLAAISQQWF 255 >PA2204 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Pae Pseudomonas aeruginosa Length = 268 Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 45 NTLDRIRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDLAKLLDVKLEYVESTYG 104 + L+ IR + VLR+A P+ D S G ++ A LA L V+L+ + + Sbjct: 22 DRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGLDVDYAKALADKLGVRLQVLPTNPA 81 Query: 105 NSILDLQANKIDLGFA-LNPTPQRALVVDFTNLVFPHPFGAMLKKGLEAKTWADINKPEV 163 N I L ANK+DL A TP+RA VDF+ F ++KKG + PEV Sbjct: 82 NRIPLLTANKVDLVLANFTITPERAQQVDFSIPYFSSGQQFIVKKGT-------LTSPEV 134 Query: 164 ----KIAVDVGSANEAVARRFAPNATIKSLKSRDEVMLEMSSGRVDCVVNALVLGLTAIA 219 ++ VD G+ NE V R P A + + + +G+V + + +A Sbjct: 135 LNKWRVGVDKGTVNEGVLREKFPGAKVIAYDDTPFAFTALRNGQVQAITQDGPKLIGLLA 194 Query: 220 KNPNLGTYKILASPSVTIAS 239 P+ Y++ P TI++ Sbjct: 195 NVPDRDKYEV---PPFTISN 211