BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0068.0031.p (205 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI1133 [J] COG0522 Ribosomal protein S4 and related proteins B... 343 2e-94 SMc00485 [J] COG0522 Ribosomal protein S4 and related proteins S... 340 2e-93 AGc3413 [J] COG0522 Ribosomal protein S4 and related proteins At... 333 1e-91 mlr0045 [J] COG0522 Ribosomal protein S4 and related proteins Ml... 332 3e-91 CC2511 [J] COG0522 Ribosomal protein S4 and related proteins Ccr... 296 2e-80 >BMEI1133 [J] COG0522 Ribosomal protein S4 and related proteins Bme Brucella melitensis Length = 205 Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 160/205 (78%), Positives = 182/205 (88%) Query: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 M+KR AKYKIDRR+G+NIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 Query: 61 YYANISERQFHGIYVEASRLKGDTGENLIGLLERRLDTVVYRSKFVSTMFAARQFINHGH 120 +Y +ISE+QF Y EA+R KGDTGENLIGLLE RLD VVYR+KFV T+FAARQFINHGH Sbjct: 61 FYGDISEKQFRKTYEEAARRKGDTGENLIGLLESRLDAVVYRAKFVPTIFAARQFINHGH 120 Query: 121 IKVNGRKVNIGSYKLKVGDLIEVKESSKQLTPVLEAAQLPERDVPDFIEVDHSKMTAKFA 180 + VNGR+VNI SY+LKVGD++EV+E SKQL VLEA QL ERDVPD+I+VDH+KM A + Sbjct: 121 VNVNGRRVNIQSYRLKVGDVVEVREKSKQLAIVLEAVQLAERDVPDYIDVDHNKMVATYN 180 Query: 181 RTPGLSDVPFPVQMEPHLIVEFYSR 205 R PGLSDVP+ VQMEP+L+VEFYSR Sbjct: 181 RVPGLSDVPYAVQMEPNLVVEFYSR 205 >SMc00485 [J] COG0522 Ribosomal protein S4 and related proteins Sme Sinorhizobium meliloti Length = 205 Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 158/205 (77%), Positives = 177/205 (86%) Query: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 M+KR +KYKIDRRMG+NIWGRPKSPVNRREYGPGQHGQRRK KLSDFGVQLRAKQKLKG Sbjct: 1 MSKRESSKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG 60 Query: 61 YYANISERQFHGIYVEASRLKGDTGENLIGLLERRLDTVVYRSKFVSTMFAARQFINHGH 120 YY +I E+QF I+ EASR KGDT ENL+GLLE RLD +VYR+KFV T+FAARQF+NHGH Sbjct: 61 YYGDIREKQFRAIFAEASRRKGDTPENLVGLLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 IKVNGRKVNIGSYKLKVGDLIEVKESSKQLTPVLEAAQLPERDVPDFIEVDHSKMTAKFA 180 +KVNG +VNIGSY+ K GD+IEVKE SKQL VLEA QL ERDVPD+IE DH+KM A F Sbjct: 121 VKVNGVRVNIGSYRCKPGDVIEVKEKSKQLVTVLEAVQLAERDVPDYIEADHNKMVATFV 180 Query: 181 RTPGLSDVPFPVQMEPHLIVEFYSR 205 R P LSDVP+PV MEPHL+VEFYSR Sbjct: 181 RVPALSDVPYPVVMEPHLVVEFYSR 205 >AGc3413 [J] COG0522 Ribosomal protein S4 and related proteins Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 205 Score = 333 bits (854), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 153/205 (74%), Positives = 175/205 (85%) Query: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 M+KR AKYKIDRRMG+NIWGRPKSPVNRREYGPGQHGQRRKGK+SDFG QLRAKQKLKG Sbjct: 1 MSKRESAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGTQLRAKQKLKG 60 Query: 61 YYANISERQFHGIYVEASRLKGDTGENLIGLLERRLDTVVYRSKFVSTMFAARQFINHGH 120 YY + E+QF + EA+R KGDT ENLI LLE RLD +VYR+KFV T+FA+RQFINHGH Sbjct: 61 YYGELREKQFRATFDEANRRKGDTSENLISLLESRLDAIVYRAKFVPTVFASRQFINHGH 120 Query: 121 IKVNGRKVNIGSYKLKVGDLIEVKESSKQLTPVLEAAQLPERDVPDFIEVDHSKMTAKFA 180 + VNG +VNIGSY+ K GD+IEV++ SKQL VLEA QL ERDVPD+IEVDH+KM A +A Sbjct: 121 VTVNGVRVNIGSYRCKAGDVIEVRQKSKQLVTVLEAVQLAERDVPDYIEVDHNKMVATYA 180 Query: 181 RTPGLSDVPFPVQMEPHLIVEFYSR 205 R P LSDVP+PV MEPHL+VEFYSR Sbjct: 181 RVPSLSDVPYPVVMEPHLVVEFYSR 205 >mlr0045 [J] COG0522 Ribosomal protein S4 and related proteins Mlo Mesorhizobium loti Length = 205 Score = 332 bits (851), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 153/205 (74%), Positives = 179/205 (87%) Query: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 M+KR AKYKIDRR+G+NIWGRPKSPVN+REYGPGQHGQRRKGKLSDFG+QLRAKQKLKG Sbjct: 1 MSKRESAKYKIDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGLQLRAKQKLKG 60 Query: 61 YYANISERQFHGIYVEASRLKGDTGENLIGLLERRLDTVVYRSKFVSTMFAARQFINHGH 120 +Y ++SE+QF +Y EA R KGDT ENLIGLLE RLD VVYR+KFV T+FAARQF+NHGH Sbjct: 61 HYGDVSEKQFRKVYEEADRRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGH 120 Query: 121 IKVNGRKVNIGSYKLKVGDLIEVKESSKQLTPVLEAAQLPERDVPDFIEVDHSKMTAKFA 180 + VNG++VNIGSY+ K GD+IEV+E SKQL VLE+ L ERDVPD+IE DH+KM A F+ Sbjct: 121 VNVNGKRVNIGSYRCKPGDVIEVREKSKQLVIVLESVGLAERDVPDYIEADHNKMVATFS 180 Query: 181 RTPGLSDVPFPVQMEPHLIVEFYSR 205 R PGL+DVPF VQMEP+L+VEFYSR Sbjct: 181 RIPGLADVPFAVQMEPNLVVEFYSR 205 >CC2511 [J] COG0522 Ribosomal protein S4 and related proteins Ccr Caulobacter vibrioides Length = 205 Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 132/204 (64%), Positives = 166/204 (81%) Query: 1 MTKRSEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKG 60 M+KR AKYKIDRRMG+N+WGRPKSPVN R YGPGQHGQRRK K+SDFG+QLRAKQKLKG Sbjct: 1 MSKRHSAKYKIDRRMGENLWGRPKSPVNSRSYGPGQHGQRRKSKVSDFGLQLRAKQKLKG 60 Query: 61 YYANISERQFHGIYVEASRLKGDTGENLIGLLERRLDTVVYRSKFVSTMFAARQFINHGH 120 YY N++E+QF Y EA+R KG+T ENLI LLE RLD +VYR+KFV T+FAARQF+NHGH Sbjct: 61 YYGNLTEKQFSRTYEEAARRKGNTSENLIALLESRLDAIVYRAKFVPTVFAARQFVNHGH 120 Query: 121 IKVNGRKVNIGSYKLKVGDLIEVKESSKQLTPVLEAAQLPERDVPDFIEVDHSKMTAKFA 180 + VNG++VNI SY+ K GD+I+V+E S+ + VLEA ERD +++ VD ++A F Sbjct: 121 VTVNGKRVNIPSYRCKAGDVIQVREKSRNMALVLEAVASNERDFAEYVSVDAKSLSATFV 180 Query: 181 RTPGLSDVPFPVQMEPHLIVEFYS 204 R P LS+VP+PV+MEP+L+VEFY+ Sbjct: 181 RAPELSEVPYPVKMEPNLVVEFYA 204