BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0068.0029.p         (129 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb20222 [S] COG1917 Uncharacterized conserved protein, contains...    76   2e-14

>SMb20222 [S] COG1917 Uncharacterized conserved protein, contains
           double-stranded beta-helix domain Sme Sinorhizobium
           meliloti
          Length = 136

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 29  RTPLQKVDF-PPGFNTVTAIAEVPAGGASGRHTHPGAETGYVLEGELELLIDGKPPLKLK 87
           RT L + D   PG  TV    +   G  S +H+HPG E  YVLEG LE  ++G+ P+ L 
Sbjct: 35  RTDLLQHDLGQPGRETVQVRVDFDPGAVSIKHSHPGEEVAYVLEGSLEYQLEGRAPVTLH 94

Query: 88  AGESYQIPEGAVHDAKTSGDKPLKVLGVYVVKAGEPLAKP 127
           AG++  IP GA H AK  G+     L  Y+V+ G PL  P
Sbjct: 95  AGDALFIPAGAAHLAKNVGNGKASELATYIVEKGSPLVVP 134