BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0068.0002.p (277 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI0260_1 [E] COG0411 ABC-type branched-chain amino acid transp... 389 e-108 mll3975 Non COG 379 e-105 SMc01949 [E] COG0411 ABC-type branched-chain amino acid transpor... 377 e-104 AGc4398 [E] COG0411 ABC-type branched-chain amino acid transport... 371 e-103 PA4910 [E] COG0411 ABC-type branched-chain amino acid transport ... 281 9e-76 >BMEI0260_1 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 280 Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/272 (68%), Positives = 222/272 (81%), Gaps = 4/272 (1%) Query: 1 MSG----DHILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFY 56 MSG D IL V+ L MRFGG++A+N+LSF +R ITA+IGPNGAGKTTVFNCITGFY Sbjct: 7 MSGNGLKDTILQVEHLSMRFGGLIAINDLSFDVKRGDITAIIGPNGAGKTTVFNCITGFY 66 Query: 57 RPSGGAIRLAHDDGRTIQLERLNDFRISKQAKVARTFQNIRLFPGMTALENLMVAQHNAL 116 +P+GG + + G LERL D +I+KQAKVARTFQNIRLF G+T LENL+VAQHN L Sbjct: 67 KPTGGMLTMHRKTGENFLLERLPDLQITKQAKVARTFQNIRLFSGLTVLENLLVAQHNTL 126 Query: 117 MRASGLTLLGLLGLPSWREAEQRAIDLARTWLARVGLLDRADDAAGNLPYGDQRRLEIAR 176 MR+SG T+LGLLGLP ++ A + AI+ AR WL ++ L+ RADD AG+LPYGDQRRLEIAR Sbjct: 127 MRSSGYTILGLLGLPGYKTAAKEAIEKARFWLEKINLIARADDPAGDLPYGDQRRLEIAR 186 Query: 177 AMCTEPVLLCLDEPAAGLNARESGGLNELLLSIRNEQGTSILLIEHDMSVVMEISDHVVV 236 AMCT+P +LCLDEPAAGLN RES LN LLL IR E GTSILLIEHDMSVVMEISDHV+V Sbjct: 187 AMCTDPEILCLDEPAAGLNPRESAELNTLLLDIRKETGTSILLIEHDMSVVMEISDHVIV 246 Query: 237 MDYGVKIAEGTPQTVRDDPKVIAAYLGADEEE 268 ++YG KI++G P+ V++DP+VIAAYLG D+EE Sbjct: 247 LEYGTKISDGAPEEVKNDPRVIAAYLGVDDEE 278 >mll3975 Non COG Length = 361 Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/270 (67%), Positives = 216/270 (80%) Query: 4 DHILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFYRPSGGAI 63 D IL V+ L M+FGG+VA+ +LSF A R +ITALIGPNGAGKTTVFNCITGFY+PS G I Sbjct: 3 DAILQVEHLSMKFGGLVAIGDLSFTARRGEITALIGPNGAGKTTVFNCITGFYKPSEGMI 62 Query: 64 RLAHDDGRTIQLERLNDFRISKQAKVARTFQNIRLFPGMTALENLMVAQHNALMRASGLT 123 L DG + LERL + I +AKVARTFQNIRLF GMT LENL+VAQHN LM+ASG T Sbjct: 63 TLNRADGSSYLLERLPNHEIPARAKVARTFQNIRLFSGMTLLENLLVAQHNKLMKASGYT 122 Query: 124 LLGLLGLPSWREAEQRAIDLARTWLARVGLLDRADDAAGNLPYGDQRRLEIARAMCTEPV 183 +LGL G +R+A +++LAR WL + L+DRADD AG+LPYG QRRLEIARAMCT P Sbjct: 123 VLGLFGFSGYRKASAESMELARHWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPE 182 Query: 184 LLCLDEPAAGLNARESGGLNELLLSIRNEQGTSILLIEHDMSVVMEISDHVVVMDYGVKI 243 LLCLDEPAAGLN +ES LNELL+ I+N GTSILLIEHDMSVVM+ISDHVVV++YG KI Sbjct: 183 LLCLDEPAAGLNPKESAALNELLMDIKNNTGTSILLIEHDMSVVMQISDHVVVLEYGRKI 242 Query: 244 AEGTPQTVRDDPKVIAAYLGADEEEAIAVM 273 ++G PQ+VR DP+VIAAYLG D+EE V+ Sbjct: 243 SDGNPQSVRTDPRVIAAYLGVDDEEVETVL 272 >SMc01949 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 295 Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust. Identities = 181/262 (69%), Positives = 213/262 (81%) Query: 1 MSGDHILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFYRPSG 60 M+ D IL V+RL MRFGG++A+N+ SF AER +ITALIGPNGAGKTTVFNCITGFY+P+ Sbjct: 8 MTKDPILKVERLSMRFGGLMAINDFSFEAERGEITALIGPNGAGKTTVFNCITGFYKPTM 67 Query: 61 GAIRLAHDDGRTIQLERLNDFRISKQAKVARTFQNIRLFPGMTALENLMVAQHNALMRAS 120 G I + G LERL DF I+K+AKVARTFQNIR+F G+T LENL+VAQHN LMRAS Sbjct: 68 GMITMRQKSGAEFLLERLPDFEITKKAKVARTFQNIRMFSGLTVLENLLVAQHNKLMRAS 127 Query: 121 GLTLLGLLGLPSWREAEQRAIDLARTWLARVGLLDRADDAAGNLPYGDQRRLEIARAMCT 180 G T+LGL G P++REA + +I+LAR WL + L +RADD AG+LPYG QRRLEIARAMCT Sbjct: 128 GYTILGLFGFPAYREASRESIELARHWLEKASLTERADDPAGDLPYGAQRRLEIARAMCT 187 Query: 181 EPVLLCLDEPAAGLNARESGGLNELLLSIRNEQGTSILLIEHDMSVVMEISDHVVVMDYG 240 P LLCLDEPAAGLN RES LN LL IR + GTSILLIEHDMSVVMEISDHVVV++YG Sbjct: 188 GPELLCLDEPAAGLNPRESLALNALLQEIRRDTGTSILLIEHDMSVVMEISDHVVVLEYG 247 Query: 241 VKIAEGTPQTVRDDPKVIAAYL 262 KI++G P V++DP+VIAAYL Sbjct: 248 QKISDGNPDFVKNDPRVIAAYL 269 >AGc4398 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 297 Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust. Identities = 178/263 (67%), Positives = 219/263 (83%), Gaps = 1/263 (0%) Query: 6 ILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFYRPSGGAIRL 65 IL V+ L M+FGG++A+N+ SF A+R +ITALIGPNGAGKTTVFNCITGFY+P+ G I + Sbjct: 22 ILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITM 81 Query: 66 AHDDGRTIQLERLNDFRISKQAKVARTFQNIRLFPGMTALENLMVAQHNALMRASGLTLL 125 +G LERL DF I+K+AKVARTFQNIRLF G+T LENL+VAQHNALM+ASG T+L Sbjct: 82 RQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTIL 141 Query: 126 GLLGLPSWREAEQRAIDLARTWLARVGLLDRADDAAGNLPYGDQRRLEIARAMCTEPVLL 185 GLLGLP+++ A +I+ A+ WL + L+DRADD AG+LPYG QRRLEIARAMCT P LL Sbjct: 142 GLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPELL 201 Query: 186 CLDEPAAGLNARESGGLNELLLSIRNEQGTSILLIEHDMSVVMEISDHVVVMDYGVKIAE 245 CLDEPAAGLN +ES LN LL SIR+E GTS+LLIEHDMSVVM+ISDHVVV++YG KI++ Sbjct: 202 CLDEPAAGLNPKESLALNTLLRSIRDE-GTSLLLIEHDMSVVMQISDHVVVLEYGQKISD 260 Query: 246 GTPQTVRDDPKVIAAYLGADEEE 268 G+P V++DPKVIAAYLG +++E Sbjct: 261 GSPDHVKNDPKVIAAYLGVEDDE 283 >PA4910 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Pae Pseudomonas aeruginosa Length = 290 Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 152/290 (52%), Positives = 194/290 (66%), Gaps = 29/290 (10%) Query: 4 DHILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFYRPSGGAI 63 D IL+V+ LMM FGGI A+N+++ ER ITALIGPNGAGKTTVFNC+TGFY+ +GG I Sbjct: 3 DKILSVEHLMMHFGGIKALNDVNLDVERGSITALIGPNGAGKTTVFNCLTGFYKATGGNI 62 Query: 64 RLAHDDGRT---IQL----ERLNDF------------------RISKQAKVARTFQNIRL 98 L + GRT IQ+ +L+DF + +A +ARTFQNIRL Sbjct: 63 -LLNTQGRTTDVIQVLGEPFQLDDFVKPPQLGSRLYYKMFGGTHLVNRAGLARTFQNIRL 121 Query: 99 FPGMTALENLMVAQHNALMRASGLTLLGLLGLPSWREAEQRAIDLARTWLARVGLLDRAD 158 F M+ +ENL+VAQH + R L G+L P +R AE A+D A WL V L+D A+ Sbjct: 122 FKDMSVVENLLVAQHMFVNRN---LLAGILNTPGYRRAESEALDHAFYWLEVVDLVDCAN 178 Query: 159 DAAGNLPYGDQRRLEIARAMCTEPVLLCLDEPAAGLNARESGGLNELLLSIRNEQGTSIL 218 AG + YG QRRLEIARAMCT P L+CLDEPAAGLN E+ L+ ++ +R+ G ++L Sbjct: 179 RLAGEMSYGQQRRLEIARAMCTRPELICLDEPAAGLNPAETHALSNIVRYLRDHHGITVL 238 Query: 219 LIEHDMSVVMEISDHVVVMDYGVKIAEGTPQTVRDDPKVIAAYLGADEEE 268 LIEHDM +VM ISDH++V+D+G IA G P+ +R D KVIAAYLGADEEE Sbjct: 239 LIEHDMGMVMNISDHIIVLDHGDVIARGNPEQIRHDEKVIAAYLGADEEE 288