BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0066.0095.p         (207 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1377 [K] COG1522 Transcriptional regulators Rso Ralstonia sol...   141   9e-34
mll9538 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium...   136   4e-32
mlr2428 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium...   133   3e-31
BMEII0518 [K] COG1522 Transcriptional regulators Bme Brucella me...   132   6e-31
CC3169 Non COG                                                        131   1e-30

>RSp1377 [K] COG1522 Transcriptional regulators Rso Ralstonia solanacearum
          Length = 152

 Score =  141 bits (356), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 104/150 (69%)

Query: 6   LDRIDIKILNELQQNASLTNVELAARVNLSPSPCLARVKNLEKLGVIDRRITILHASVLG 65
            D ID +IL+ LQ++  L N+ELA  V LSPSPCL RV+ LE+ GVI+R + +L+ + +G
Sbjct: 3   FDAIDRRILSALQRDGRLQNIELAKEVGLSPSPCLRRVRLLEEAGVIERYVAVLNPAKVG 62

Query: 66  LGVTAFIQVRLEKQVQNSLDNFTRAIDRMEQVMECYLMTGDNDYLLRVMASDIEDLEDLI 125
            G++ F ++ L+ Q   ++D FT AI ++ +V+EC+LM GD D+LLRV+A+D+ED     
Sbjct: 63  KGLSVFARIWLKGQDAATVDAFTAAIQQLPEVVECHLMAGDCDFLLRVVAADLEDYRQFQ 122

Query: 126 VNKLSRISGVSSIKSNLALKKISYKTVLPI 155
           +  L+RI GV S+K+ + ++KI   + LP+
Sbjct: 123 IQYLTRIPGVQSVKTEVPMQKIKLTSALPV 152


>mll9538 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 155

 Score =  136 bits (342), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 99/149 (66%)

Query: 6   LDRIDIKILNELQQNASLTNVELAARVNLSPSPCLARVKNLEKLGVIDRRITILHASVLG 65
           LD ID+KI+  LQ+NA  T  +LA  V LSPSPC  RV+ LE+ GVI     +L    LG
Sbjct: 6   LDAIDLKIIAALQKNAKATTNDLAEAVGLSPSPCARRVRLLERAGVIKGYTVVLDQKKLG 65

Query: 66  LGVTAFIQVRLEKQVQNSLDNFTRAIDRMEQVMECYLMTGDNDYLLRVMASDIEDLEDLI 125
           L ++AF  ++LE+Q ++ LD F++A+ R  +V++CYLMTG  DYL+R++  D+E  E  I
Sbjct: 66  LPISAFASIKLERQREDDLDRFSQAVLRWPEVVDCYLMTGQRDYLMRIVVRDLEAYERFI 125

Query: 126 VNKLSRISGVSSIKSNLALKKISYKTVLP 154
            +KL+R+  ++SI+S+ AL ++     LP
Sbjct: 126 KDKLTRLDNIASIESSFALGQVKRSEALP 154


>mlr2428 [K] COG1522 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 161

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 99/150 (66%)

Query: 6   LDRIDIKILNELQQNASLTNVELAARVNLSPSPCLARVKNLEKLGVIDRRITILHASVLG 65
           LD ID +IL  LQ+N  + N +LA+ V LSPSPCL RVK LE+ GVIDR + +L+ + + 
Sbjct: 12  LDDIDKRILRALQRNGRMANNDLASEVGLSPSPCLRRVKLLEEAGVIDRYVAVLNPASID 71

Query: 66  LGVTAFIQVRLEKQVQNSLDNFTRAIDRMEQVMECYLMTGDNDYLLRVMASDIEDLEDLI 125
            G+T F ++ L+ Q ++++ +F   + ++ QVMECYLM GD D L+RV+A+D+ D     
Sbjct: 72  KGLTFFTRIWLKTQDEDTVQHFATEVAKLAQVMECYLMLGDCDALVRVVAADVNDYRRFQ 131

Query: 126 VNKLSRISGVSSIKSNLALKKISYKTVLPI 155
              LSRI GV ++K+++    I Y + LPI
Sbjct: 132 SEHLSRIKGVQNVKTDVPSWTIKYTSELPI 161


>BMEII0518 [K] COG1522 Transcriptional regulators Bme Brucella melitensis
          Length = 154

 Score =  132 bits (331), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 99/152 (65%)

Query: 4   VALDRIDIKILNELQQNASLTNVELAARVNLSPSPCLARVKNLEKLGVIDRRITILHASV 63
           + LD ID KIL  LQ+N  + N +LA  V LSPSPCL RVK LE+ GVIDR + +L+ + 
Sbjct: 3   MKLDEIDKKILRALQRNGRIANNDLAREVGLSPSPCLRRVKLLEEAGVIDRYVAVLNPAK 62

Query: 64  LGLGVTAFIQVRLEKQVQNSLDNFTRAIDRMEQVMECYLMTGDNDYLLRVMASDIEDLED 123
           +G G+T F ++RL++Q + +L  F   I R+ QV+ECY M GD D ++R +A+DIED   
Sbjct: 63  IGKGLTFFTRIRLDQQDEETLQKFANEIMRLPQVLECYFMLGDYDAMIRGVATDIEDYRR 122

Query: 124 LIVNKLSRISGVSSIKSNLALKKISYKTVLPI 155
                LSRI GV ++K+++  + +   + +P+
Sbjct: 123 FQSEYLSRIKGVQNLKTDVPSQIVKQISEMPL 154


>CC3169 Non COG
          Length = 201

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 96/150 (64%)

Query: 6   LDRIDIKILNELQQNASLTNVELAARVNLSPSPCLARVKNLEKLGVIDRRITILHASVLG 65
           +D  D +I+ ELQ++  LTN ELA RVNLSPSPCL RV+NLE  GVI     ++     G
Sbjct: 50  MDAKDRQIIRELQKDGRLTNQELAERVNLSPSPCLRRVRNLEAEGVITGYTALVDQKAYG 109

Query: 66  LGVTAFIQVRLEKQVQNSLDNFTRAIDRMEQVMECYLMTGDNDYLLRVMASDIEDLEDLI 125
           L +T F++VRL++  Q+ +  F  A+ R++Q+++C+L+ G +DYLLRV+   +E  ED +
Sbjct: 110 LPITVFVRVRLDRHGQDLIKGFEDAVARIDQILDCFLLAGGDDYLLRVIVDSLEAYEDFM 169

Query: 126 VNKLSRISGVSSIKSNLALKKISYKTVLPI 155
             +L  I G++SI ++ A   +    V P+
Sbjct: 170 RRRLHAIPGIASIDTSFAYGVVKQTRVFPL 199