BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0083.p (241 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value APE2524 [E] COG0411 ABC-type branched-chain amino acid transport... 223 4e-58 BMEII0874_3 [E] COG0411 ABC-type branched-chain amino acid trans... 187 1e-47 DR0283 [E] COG0411 ABC-type branched-chain amino acid transport ... 184 1e-46 PA1071 [E] COG0411 ABC-type branched-chain amino acid transport ... 184 2e-46 DR1035 [E] COG0411 ABC-type branched-chain amino acid transport ... 183 4e-46 >APE2524 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Ape Aeropyrum pernix Length = 242 Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 116/238 (48%), Positives = 160/238 (67%) Query: 1 MTALLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGT 60 +T +L++ +V KRFGG+ A+ GVSFS++ L+GPNGAGKTT FN+I+G + P G Sbjct: 4 VTIILDVRDVYKRFGGIEALKGVSFSVRRGERVGLIGPNGAGKTTLFNIISGIYMPDRGR 63 Query: 61 IRFEGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMVGAFSWTRKVSEAREAALD 120 + ++G I+G A R GI RTFQIVRP+ ++TVL N +VGA T + EARE A++ Sbjct: 64 VIYKGVDITGWPAYRRSRAGIARTFQIVRPLANLTVLNNVIVGALLRTNDIREARERAME 123 Query: 121 TLETVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGLRPTEAAAVVRVL 180 ++ VGLA K + L L ++K LE A+AL+T+P LLLLDE+ AGLRP E +V L Sbjct: 124 AIDMVGLAGKEDILAKDLNLIEKKRLELARALATQPELLLLDEIAAGLRPREVDDLVYTL 183 Query: 181 RRLVERGLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIVKHPEVLAGYLGDG 238 + +RG+TI++VEHVMR VM AE V+VLH G KIAEG P + + V+ Y+G G Sbjct: 184 LEISKRGITIIMVEHVMRAVMNFAERVIVLHFGEKIAEGTPREVASNKLVIEAYMGTG 241 >BMEII0874_3 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 271 Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 102/239 (42%), Positives = 146/239 (61%), Gaps = 3/239 (1%) Query: 4 LLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGTIRF 63 +L + N++K FGGL VSF+L+E + L+GPNGAGKTT FNMI+G P GT+ Sbjct: 28 ILRVQNLNKHFGGLHVTRNVSFTLREGEVLGLIGPNGAGKTTLFNMISGFLAPDEGTVNL 87 Query: 64 ---EGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMVGAFSWTRKVSEAREAALD 120 +G+ + + LG+GRTFQIV+P MTV EN MVGAF +AREAA + Sbjct: 88 CGADGQFHAPKNPADFAALGLGRTFQIVQPFAAMTVEENIMVGAFYRHHHEKDAREAARE 147 Query: 121 TLETVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGLRPTEAAAVVRVL 180 T +GL P A LT+ K LE A+ ++ PR+LLLDEVMAG+ T+ + ++ Sbjct: 148 TAWRMGLGPLLGAEARGLTIGGLKRLEVARVMAMEPRILLLDEVMAGINQTDVRRAIDLM 207 Query: 181 RRLVERGLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIVKHPEVLAGYLGDGF 239 + + G++I+ +EHVM+ VM ++ V+VL G IA+G P +V+ P+V+ YLG F Sbjct: 208 LSIRDSGVSIIAIEHVMQAVMSLSDRVIVLASGEVIAQGRPQDVVRDPQVVEAYLGKEF 266 >DR0283 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 290 Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 107/253 (42%), Positives = 148/253 (58%), Gaps = 15/253 (5%) Query: 4 LLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGTIRF 63 LLE+ + RFGGL AV V+ L+ ITA++GPNGAGK+T FN+I+G ++PT G I F Sbjct: 14 LLEVQGLGIRFGGLHAVRDVTAQLQPGRITAIIGPNGAGKSTFFNLISGFYKPTSGRIIF 73 Query: 64 EGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMVGAFSWTR-------------- 109 G+ I+ V GI RTFQ ++++VL+NAM+G TR Sbjct: 74 RGEDITPLRTHLVVGRGIARTFQTTTIYQELSVLDNAMIGHRVRTRAGLLDALLRTGRER 133 Query: 110 -KVSEAREAALDTLETVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGL 168 SE+R A+ LE VGLA +A L +K + A AL++ P LLLLDE AG+ Sbjct: 134 HDESESRAGAMRALERVGLAGQAALPAGALNQEGKKRVGIAMALASDPHLLLLDEPAAGM 193 Query: 169 RPTEAAAVVRVLRRLVERGLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIVKHP 228 P E ++ ++R+LV GL+I LVEH M +VM A++++VLHHG KIA+G P I + P Sbjct: 194 NPEETENLMGLIRQLVSGGLSIALVEHKMNLVMGLADDILVLHHGQKIAQGTPAQITRDP 253 Query: 229 EVLAGYLGDGFRG 241 V+ YLG G Sbjct: 254 AVVEAYLGSHAHG 266 >PA1071 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Pae Pseudomonas aeruginosa Length = 255 Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 99/250 (39%), Positives = 154/250 (61%), Gaps = 16/250 (6%) Query: 4 LLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGTIRF 63 +LE++ ++ RFGGLLAV+GV+ ++E+ + +++GPNGAGKTT FN + G ++PT G IR Sbjct: 5 ILEVSGLTMRFGGLLAVNGVNLKVEEKQVVSMIGPNGAGKTTVFNCLTGFYQPTGGLIRL 64 Query: 64 EGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMV------------GAF---SWT 108 +G+ I G + R G+ RTFQ VR ++MT +EN +V G F ++ Sbjct: 65 DGEEIQGLPGHKIARKGVVRTFQNVRLFKEMTAVENLLVAQHRHLNTNFLAGLFKTPAFR 124 Query: 109 RKVSEAREAALDTLETVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGL 168 R EA E A LE V L AN S L ++ LE A+ + TRPR+L+LDE AGL Sbjct: 125 RSEREAMEYAAHWLEEVNLTEFANRSAGTLAYGQQRRLEIARCMMTRPRILMLDEPAAGL 184 Query: 169 RPTEAAAVVRVLRRL-VERGLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIVKH 227 P E + ++ +L E +T++L+EH M++VM ++++VV++ GA +A+G P I + Sbjct: 185 NPKETDDLKALIAKLRSEHNVTVLLIEHDMKLVMSISDHIVVINQGAPLADGTPEQIRDN 244 Query: 228 PEVLAGYLGD 237 P+V+ YLG+ Sbjct: 245 PDVIKAYLGE 254 >DR1035 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 279 Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 103/253 (40%), Positives = 151/253 (59%), Gaps = 20/253 (7%) Query: 4 LLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGTIRF 63 LL++ +++K FGGL AV+ V+F + ER I +++GPNGAGKTT FN+I G + P GT+ Sbjct: 18 LLDVQHLTKSFGGLTAVNDVTFQVPERRIISVIGPNGAGKTTFFNLITGIYAPDRGTVNL 77 Query: 64 EGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMVG---------------AFSWT 108 G+++ G + V GI RTFQ +R MT EN M+G + Sbjct: 78 AGRSLVGLRPDQVVEAGISRTFQNIRLFPSMTAEENIMLGRGVRLRGGFWDSVLHTARFQ 137 Query: 109 RKVSEAREAALDTLETVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGL 168 + EAR A L+ VGL+ + L D++ LE A+AL+T P+L+LLDE AG+ Sbjct: 138 KDEEEARNTARLMLDFVGLSKWRGELSTNLPYGDQRKLEIARALATTPKLILLDEPAAGM 197 Query: 169 RPTEA---AAVVRVLRRLVERGLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIV 225 P E A++R +R E G+T++L+EH MR+VM +EN+ VL++G+K+AEG P I Sbjct: 198 NPRETEDLKALIRAIRD--ELGVTVVLIEHDMRLVMTLSENITVLNYGSKLAEGLPHEIR 255 Query: 226 KHPEVLAGYLGDG 238 +PEV+ YLG G Sbjct: 256 NNPEVMTAYLGSG 268