BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0020.p (247 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2567 [S] COG3826 Uncharacterized protein conserved in bacteri... 359 3e-99 mlr1862 [S] COG3826 Uncharacterized protein conserved in bacteri... 347 1e-95 CC0708 Non COG 309 4e-84 Rv2227 [S] COG3826 Uncharacterized protein conserved in bacteria... 166 6e-41 MT2286 [S] COG3826 Uncharacterized protein conserved in bacteria... 162 8e-40 >RSc2567 [S] COG3826 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 250 Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 167/230 (72%), Positives = 188/230 (81%) Query: 17 ARVDALDWDRITTDLDGQGCAVLNGLLTPEECDAIAALYPDDSQFRSRIVMGRHGFGRGE 76 A +D DW + L+ G A+L GLLTP CDA+AALYP DS +RSR+ M RHGFGRGE Sbjct: 20 APIDTFDWRAVEDALNDAGNALLPGLLTPGACDALAALYPRDSLYRSRVAMARHGFGRGE 79 Query: 77 YKYFSYPLPDLIAELRPALYARLTATANRWNETMGIEIRYPTSHAVFLKRCHDAGQTRPT 136 YKYF+YPLP LI LR LY RL ANRWN+ MGI++RYP +HA FL+RCHDAGQ RPT Sbjct: 80 YKYFAYPLPGLIEHLRTQLYPRLAPIANRWNQAMGIDVRYPAAHADFLRRCHDAGQLRPT 139 Query: 137 PLLLQYGEGDYNCLHQDLYGEHVFPIQVAILLSQSGRDFTGGEFVLTEQRPRMQSRPEVV 196 PL+LQYG GDYNCLHQDLYGEHVFP+QVAILLS+ G DFTGGEFV+TEQRPRMQSRP+VV Sbjct: 140 PLILQYGPGDYNCLHQDLYGEHVFPLQVAILLSEPGADFTGGEFVMTEQRPRMQSRPDVV 199 Query: 197 PLTKGDAVAFAVHHRPVQGTRGPYRVNLRHGVSRIRSGHRHTVGVIFHDA 246 PL KGDA FAV RPVQG RGPYRV +RHGVSR+RSG RHTVG+IFHDA Sbjct: 200 PLRKGDAAVFAVSQRPVQGARGPYRVTMRHGVSRLRSGQRHTVGIIFHDA 249 >mlr1862 [S] COG3826 Uncharacterized protein conserved in bacteria Mlo Mesorhizobium loti Length = 247 Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 167/247 (67%), Positives = 188/247 (76%) Query: 1 MTATAKTITRPAPGILARVDALDWDRITTDLDGQGCAVLNGLLTPEECDAIAALYPDDSQ 60 M A AK RV DW + +LDG GCAV+ LLTPEEC IA LY + Sbjct: 1 MNAHAKVAAPVVEAAETRVATYDWPALAAELDGFGCAVMEKLLTPEECRQIAGLYIKEQH 60 Query: 61 FRSRIVMGRHGFGRGEYKYFSYPLPDLIAELRPALYARLTATANRWNETMGIEIRYPTSH 120 FRS I M RHGFG+GEY+YF YPLPDL+ LR ALY RL ANRWNE M I +RYP +H Sbjct: 61 FRSHIHMARHGFGKGEYRYFRYPLPDLLGGLRSALYPRLGEVANRWNERMAIPLRYPATH 120 Query: 121 AVFLKRCHDAGQTRPTPLLLQYGEGDYNCLHQDLYGEHVFPIQVAILLSQSGRDFTGGEF 180 A FL +CH AGQ RPTPLLLQY GD+NCLHQDLYG+ FP+QVAILLS+ G+DFTGGEF Sbjct: 121 ADFLDQCHAAGQVRPTPLLLQYVPGDFNCLHQDLYGDLAFPLQVAILLSEPGKDFTGGEF 180 Query: 181 VLTEQRPRMQSRPEVVPLTKGDAVAFAVHHRPVQGTRGPYRVNLRHGVSRIRSGHRHTVG 240 LTEQRPRMQSR EVVPL +GDAVAFAVH+RPVQGT+G YRVNLRHGVSR+RSG RHTVG Sbjct: 181 ALTEQRPRMQSRVEVVPLRQGDAVAFAVHNRPVQGTKGNYRVNLRHGVSRLRSGMRHTVG 240 Query: 241 VIFHDAK 247 +IFHDA+ Sbjct: 241 IIFHDAR 247 >CC0708 Non COG Length = 234 Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 145/226 (64%), Positives = 170/226 (75%) Query: 22 LDWDRITTDLDGQGCAVLNGLLTPEECDAIAALYPDDSQFRSRIVMGRHGFGRGEYKYFS 81 +DW RI +LD +G A+ LL PE C +A LYP D FRSR+VM RHGFGRGEYKYFS Sbjct: 9 MDWTRIAAELDARGWALTGPLLKPETCAGVADLYPRDEGFRSRVVMARHGFGRGEYKYFS 68 Query: 82 YPLPDLIAELRPALYARLTATANRWNETMGIEIRYPTSHAVFLKRCHDAGQTRPTPLLLQ 141 YPLPD++ LR LY L+ ANRW + +G + R+P + A L+RCHDAGQ RPTPLLL Sbjct: 69 YPLPDVVQRLREGLYGPLSGIANRWAQRLGEDRRFPQTLAGMLERCHDAGQVRPTPLLLT 128 Query: 142 YGEGDYNCLHQDLYGEHVFPIQVAILLSQSGRDFTGGEFVLTEQRPRMQSRPEVVPLTKG 201 YG GDYNCLHQDLYGEHVFP+Q A LL + GRDFTGGEFV+ EQRPR QS P+VVPL +G Sbjct: 129 YGPGDYNCLHQDLYGEHVFPLQAAFLLDEPGRDFTGGEFVIVEQRPRQQSAPQVVPLRQG 188 Query: 202 DAVAFAVHHRPVQGTRGPYRVNLRHGVSRIRSGHRHTVGVIFHDAK 247 + V FAV RP GTRG +R LRHGVS +RSG R T+GVIFHDA+ Sbjct: 189 EGVIFAVRERPADGTRGVHRRVLRHGVSEVRSGRRRTLGVIFHDAQ 234 >Rv2227 [S] COG3826 Uncharacterized protein conserved in bacteria Mtu Mycobacterium tuberculosis H37Rv Length = 233 Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 88/182 (48%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Query: 68 GRHGFG---RGEYKYFSYPLPDLIAELRPALYARLTATANRWNETMGIEIRYPTSHAVFL 124 GR+G R F PL +I L+ ALY +L A W +G E +P S +L Sbjct: 51 GRYGIQAVRRRAVSIFPCPLSRVIERLKQALYPKLLPIARNWWAKLGREAPWPDSLDDWL 110 Query: 125 KRCHDAGQTRPTPLLLQYGEGDYNCLHQDLYGEHVFPIQVAILLSQSGRDFTGGEFVLTE 184 CH AGQTR T L+L+YG D+N LHQDLYGE VFP+QV I LS D+TGGEF+L E Sbjct: 111 ASCHAAGQTRSTALMLKYGTNDWNALHQDLYGELVFPLQVVINLSDPETDYTGGEFLLVE 170 Query: 185 QRPRMQSRPEVVPLTKGDAVAFAVHHRPVQGTRGPYRVNLRHGVSRIRSGHRHTVGVIFH 244 QRPR QSR + L +G F RPV+ +RG +RHG+S IRSG R+ +G+IFH Sbjct: 171 QRPRAQSRGTAMQLPQGHGYVFTTRDRPVRTSRGWSASPVRHGLSTIRSGERYAMGLIFH 230 Query: 245 DA 246 DA Sbjct: 231 DA 232 >MT2286 [S] COG3826 Uncharacterized protein conserved in bacteria MtC Mycobacterium tuberculosis CDC1551 Length = 161 Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 81/160 (50%), Positives = 102/160 (63%) Query: 87 LIAELRPALYARLTATANRWNETMGIEIRYPTSHAVFLKRCHDAGQTRPTPLLLQYGEGD 146 +I L+ ALY +L A W +G E +P S +L CH AGQTR T L+L+YG D Sbjct: 1 MIERLKQALYPKLLPIARNWWAKLGREAPWPDSLDDWLASCHAAGQTRSTALMLKYGTND 60 Query: 147 YNCLHQDLYGEHVFPIQVAILLSQSGRDFTGGEFVLTEQRPRMQSRPEVVPLTKGDAVAF 206 +N LHQDLYGE VFP+QV I LS D+TGGEF+L EQRPR QSR + L +G F Sbjct: 61 WNALHQDLYGELVFPLQVVINLSDPETDYTGGEFLLVEQRPRAQSRGTAMQLPQGHGYVF 120 Query: 207 AVHHRPVQGTRGPYRVNLRHGVSRIRSGHRHTVGVIFHDA 246 RPV+ +RG +RHG+S IRSG R+ +G+IFHDA Sbjct: 121 TTRDRPVRTSRGWSASPVRHGLSTIRSGERYAMGLIFHDA 160