BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0066.0018.p         (404 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

all2904 [GEPR] COG0477 Permeases of the major facilitator superf...    67   7e-11

>all2904 [GEPR] COG0477 Permeases of the major facilitator superfamily Nos
           Nostoc sp. PCC 7120
          Length = 390

 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 15/259 (5%)

Query: 16  LAVLQLVFTLGWTTYLIYLPKLCADVGIAPATVILILMMDQGIFTVTDTAMGMAADRISS 75
           LA LQ   TL W  Y  Y+P+L    G   +  + +L+++  +  + +  MG  +D+   
Sbjct: 16  LAALQGAITLAWIIYNAYVPQLLVQFGFPASLAVGLLVLENALAVIMEPLMGGLSDQAQR 75

Query: 76  LVGRLGLFVGILAAISCAAFIALPYVAGTGPGAKVW---LIVLIVIWAVTSSALRAPPLT 132
            VG   L +     +S    IA+P +    P   VW   L +++V WA++ +  R+P + 
Sbjct: 76  WVGSRFLLISAGVILSATLLIAIPCIVTFVPPTVVWRSLLPIVLVAWALSMTVFRSPAIA 135

Query: 133 LLGKYRAQPSVPFLAALAMLGYGIAGAVSPYLGVVLRNQDARLPFVLSGAVLLLTALAFS 192
           LL KY     +P   ++ +L  GI GA  P     + +      F ++  VLL    A  
Sbjct: 136 LLAKYSMPAELPLAFSVVVLTGGIIGAFRPIANKFILSLGPIFAFAIASFVLLAVTAALR 195

Query: 193 GIERRIAAEAQPARLVP-PAKRLGAVPMFLIGSMVLLSLGYQLHFNI--NSAPFYLRFAK 249
            +       A P  +   P + L      ++G+   ++ G +L  +I     P  L+   
Sbjct: 196 FVNPPSTPVANPREITQLPNRELS----LILGTGFGVAWGSRLVMDILGKILPVQLQITS 251

Query: 250 ADELQWLMPVFWIGFNIAM 268
            D   WLM   W+G  IA+
Sbjct: 252 ND---WLM--VWVGLAIAL 265