BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0064.0010.p         (84 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA3467 [GEPR] COG0477 Permeases of the major facilitator superfa...    62   4e-10

>PA3467 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae
          Pseudomonas aeruginosa
          Length = 455

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 36/45 (80%)

Query: 27 ADIAARLERLPLTSYQRWIFGIIATAWFFDSMDLAALTFVLGSIR 71
          A  A RLERLPL+ Y R +F IIA A+FFDSMDLA +TF+LGSI+
Sbjct: 6  ASAAERLERLPLSPYHRLVFVIIALAFFFDSMDLAMMTFLLGSIK 50